Polyodon spathula (Mississippi paddlefish): 121325477
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Entry
121325477 CDS
T07273
Name
(RefSeq) lateral signaling target protein 2 homolog isoform X1
KO
K24780
lateral signaling target protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325477
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
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Others
121325477
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GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
121325477
NCBI-ProteinID:
XP_041123920
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Position
1:complement(101431807..101540993)
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AA seq
996 aa
AA seq
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MMNRFRKWLYKPKRSDPQLLAQFFYADEELNQVAAELDSLDGRKDPQRCTLLVNQFRSCQ
DNVLSIINKIMDECISSDRANRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNREIE
SMAMRPLAKDLTRSLEEVRNIMRDQSLRDLNLHTDKMKESLRHFDSLFAEFELSYVSAMV
PVKTPKEYYVQQEVIVLFCETVERALKLGYLTQDMIDDYEPALMFTIPRLAIVCGLVVYS
EGPLNLDRKSEDMSELFRPFRTLLRKIRDLLQALTEEELFTLERNLCISQDGEFPVVQAL
PEAVVPPPTPPPLLPVPTTIATSPPDPEEPSASPSAVGLGKGTGDQLLLGKAENTEAELA
CSMQYDEQELEQLNMMVYRVGDEMSCLLSPPSLFQSPVHRGGSSGNSSTEASPGRRPPSR
TNNNDDDEEEEDRVFLMDDLDGTGEPLAGMDGYSSSCAWRDVRSPERDTRKPSVQVQREA
DAVVVQNGWPGSSLVEAALRKNKNSNTVALQQLSIPPAAAGADSHSVAHLPSEGSEEPNG
WEAGTEDVETAEMIAQRTGGMKLSATVIFNPKSPSLSDLTVEAAADKLHLLPPASYEESQ
SEIPCEGPHRLSGLAATNCLINSCVCCGSCDDGMEALGDKGKRFASAMVIDTASSLVVNK
EMGPLDSKLDCTSSIQEGVKNDCPGHRDGVKEQKSQKCIKCLAQTSGTESGQQGDKEMCS
HQRLTERKRQASGRKEKTTEMNDRTAGNREMEEDVNLKSSLSSQDSPLSSISSSDCESVS
VTTCSLSSTYTASSLTTSSYTSGDLDHEEIQLALHAAKMAAREKIRSRFHSSSDLIHRLF
VCISGVADQLQTNYASDLRNILKTLFEVMATKPELEDKDKQKKGGQGLRSAALEDCALCQ
ESISSSEIAAKARDGEFEDPPDWVPDEVCSYCTACEAPFTVIRRKHHCRSCGKIFCSRCS
SHSAPLPRYGQVKPVRVCTHCYMFHVTPFYRDKTGI
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaggttcagaaagtggctgtataagccaaagaggtcggacccgcagctcctc
gctcagttcttctatgcggatgaggagctgaaccaggtggcagctgagctggacagcttg
gacggcaggaaggacccacagcgctgcacactgctcgttaaccagttcagatcctgccag
gacaacgtgttaagcatcataaacaaaatcatggatgaatgtatttccagtgaccgggcg
aatcgggacttttgcgtgaagttccctgaagaaataaggcacgacaacctggcagggcag
ctctggttcggggcagagtgtttagcggctggctcgataatcatgaaccgggagatcgag
agcatggcgatgcggcccctggccaaagacctgacacgcagccttgaggaggtgaggaac
atcatgcgagaccagtccctgcgcgacctcaacctccacaccgacaagatgaaggagtca
ctgcgccactttgacagcctgtttgcagagtttgagctcagttatgtgtcagcgatggta
cctgtaaagacccctaaagaatattacgtacaacaagaagtgatcgtgctcttctgtgaa
acagtggaaagggcactaaagcttggatacctcacacaagacatgattgatgactatgag
ccagcactaatgtttacaattccaagactagccattgtatgtgggctggtagtttactct
gagggaccactgaacctggaccgcaagtctgaggacatgtccgagctcttcaggccattc
cgcaccttgctgagaaagatcagggacttgctgcaggccttgacggaagaggagctgttc
acactggagcgtaacctgtgcatctcgcaggacggagagttcccagtggtgcaggccctt
cccgaggcggtggtgccacctcccactccaccccctctccttccagttccaaccaccatt
gccacgagcccccctgatcccgaggaaccatctgcgtctcccagcgcagtggggctgggc
aagggaacgggggaccagctgctgttggggaaggctgagaacacagaggccgagctggcc
tgctccatgcagtacgatgagcaggagctggagcagctcaacatgatggtgtaccgagtg
ggcgatgagatgtcctgcctgctctccccgcccagcctgttccagtcccccgtgcacaga
ggggggagcagtggcaactcaagcactgaggcctcgccagggaggaggccacctagccga
acaaacaacaacgacgatgacgaagaggaagaggaccgtgttttcttaatggatgattta
gatgggaccggagaacccctggctgggatggatggttactcctcctcttgtgcttggagg
gatgtccgctctcctgagcgagacaccaggaagccttctgttcaggtccagagagaagct
gatgcagtggtggtgcagaacggatggccagggtcctctctggtggaggcagccctgaga
aaaaacaaaaatagcaacactgtagcgctgcaacagctgtcaattccaccagcagcagca
ggcgccgacagccacagcgttgctcacctaccctcagaagggtctgaggagcccaatggc
tgggaggcgggcactgaggatgtggaaactgcggagatgattgcccagaggactggcggg
atgaaattatctgctaccgtcatcttcaaccccaaatccccgtccctctccgatctaaca
gtggaggctgctgcagataaactccatctgctgccccctgcctcttatgaggaatcccag
tcggaaattccctgtgaggggcctcacaggctaagtgggttggcggctacgaactgtctg
atcaactcatgcgtgtgttgtgggagctgtgatgatggcatggaagctctgggggacaag
ggcaagaggtttgcatctgccatggttatagacactgccagcagcttagttgtgaacaag
gaaatgggtcctctagatagtaaactggactgcacatcgtccatacaggagggggtaaaa
aacgactgccctggccacagggacggggtcaaggagcagaagagccaaaagtgtatcaag
tgtctggcccaaacctcaggtactgagagtggccagcagggagataaggagatgtgtagc
caccagaggctgactgagagaaagaggcaggccagcgggagaaaggaaaagacaacagag
atgaatgacaggacagcgggcaacagagagatggaggaagatgtcaacttgaagtctagc
ttgagttctcaggattccccgctcagttccatctctagcagtgactgtgagagtgtgtct
gtcaccacatgtagtctgtccagcacatacacggcaagcagtctgaccaccagctcttac
acctcgggtgaccttgaccacgaggagatccagctggccctgcacgcagccaagatggca
gcccgggagaagatccgctcccgattccacagcagcagtgacctcatccaccggctcttc
gtctgtatctcaggtgtggctgatcagctgcagaccaactacgccagtgatctcagaaac
atcttgaagacgttgtttgaagtcatggcaacaaagcctgaactggaggacaaggacaag
cagaagaaaggtggccagggcctgagaagtgcggcactggaggactgcgctttgtgtcag
gaaagcatttcatcttctgaaatcgctgccaaggccagggatggggaatttgaagacccc
ccggactgggttccagacgaggtctgcagctactgcactgcctgtgaggctcccttcact
gtcatccgcaggaagcaccactgcaggagctgcggcaagatcttctgctcccgctgctcc
tcgcactccgcccccttgccccggtacgggcaggtgaaacctgtgagggtgtgcactcac
tgctacatgttccacgtcacccccttctacagagacaagacagggatctga
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