Polyodon spathula (Mississippi paddlefish): 121325480
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Entry
121325480 CDS
T07273
Name
(RefSeq) zinc finger protein 423-like isoform X1
KO
K22870
zinc finger protein 423
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121325480
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121325480
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121325480
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121325480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-H2C2_2
zf-Di19
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
Zap1_zf1
zf-C2H2_FBX41
zf-C2H2_3rep
zf-C2H2_2
Phage_zn_bind_3
zf-C2H2_ZNF462
zf-C2H2_9
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121325480
NCBI-ProteinID:
XP_041123921
LinkDB
All DBs
Position
13:44286653..44390913
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AA seq
1335 aa
AA seq
DB search
MSRRKQAKPRSVKVEEGESSEFVPSWGSTAVQTDDVLVVKQEFSRKEGLSVPSHEDRTQE
GDEDLDDMYTCYSCQQDFDSLADLTEHRAHQCPGDGDDDPQLSWGASSPSCKDVASPSQM
HGDGCDLGMGDEEGGPGLPYPCQFCDKSFSRLSYLKRHEQIHSDKLPFKCTYCSRLFKHK
RSRDRHVKLHTGDKKYHCHECEAAFSRSDHLKIHLKTHSSSKPFKCTVCKRGFSSTSSLQ
SHMQAHKKNKEHVERAEKDVNMKDDFFMCDYCEETFNQTDELEKHVLDHHPQLSEKADLQ
CIHCPEVFSDESSLLSHIDHTHANKKHKCPMCPEQFFSVEDVYCHMDSHRQPDSSNHSIS
PDPVLGSVASMSSATPDSSVSVERGSTPDSTLKPSRAPRKMASGEQEESLTWPTKITYSC
PYCSKRDFNSLAVLEIHLKTIHGDKPQQSHACQICLDSLPTLYNLNEHVRKAHRSSNAFP
MLQFSNVSAFHCNYCSETFADINSLQEHIRVTHCIPSSATTLEGNHAFFCNQCSMGFLTE
SSLTEHIQQIHCNVGSSKLESPAIQPSQSFMEVYSCPYCTNSPIFGSILKLTKHIKENHK
NIPLANNKRAKAEHSPVSSDVEVSSPKRQRLSANTTPGSNGEYPCNQCDLKFATFDGFQT
HLKSHLELLLRKQSCPQCKEDFDSQESLLQHLTVHYMTTSTHYVCESCDKQFSSVDDLQK
HLLDMHTFVLYHCTLCQEVFDSKVSIQVHLAVKHSNEKKMYRCTACNWDFRKETDLQLHV
KHSHLGNPTKARKCIFCGEMFGTEVELQCHITTHSKKYNCRFCSKAFNAITLLEKHLREK
HCVFENSNSQNGTPNGVPPVSKRTEAPDHQNMLMKSQETVNSHEASEDDVDASEPMYGCD
ICGAAYTMEALLQNHRLRDHNIQPGEDDCRRKKAEFIKGSHKCSVCSRTFFSENGLREHV
QTHRGPAKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGTCRICKMPLQSEEEFIEHCQM
HPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKLASSSASSSPNGQLQKLYKCALCL
KEFRNKQDLVKLDVNGLPYGLCAGCMNRGTNGQSSSGTQQEPSEKPVTGLRCPECAVKFE
TLEDLESHIQLDHRETTPETNSQKKVPETSPAPKKKTYQCIKCQMTFETEREIQIHVANH
MIVLSACCLVLWKPESSCLWFWNEVCARGGRGGGSTVDHHDSKEEGINHECKLCNQMFDS
PAKLLCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFAVHGQEDKIYDCSQCPQKFF
FQTELQNHTLSQHAQ
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgaaagcaggccaagccgcgctccgttaaagtggaagaaggcgagtcctcc
gagtttgttccgagctggggttccacggcagtgcagacagatgatgtcttggtggtgaag
caggagttctcgaggaaggaggggctcagtgtgccgagccacgaggaccggacacaggag
ggagacgaggacctggacgacatgtatacctgctacagctgccagcaggacttcgactcg
ctcgcggacctgaccgagcaccgcgcccaccagtgcccaggggatggtgatgatgaccct
cagctctcctggggggcttcctcgccctcctgcaaagatgtggcatcgccctcccagatg
catggggatgggtgtgacctgggcatgggggatgaggaagggggcccaggcttgccctat
ccgtgccagttctgcgacaagtccttcagccgcctgagctacctgaagcgtcatgagcag
atccacagcgacaagctgcccttcaaatgcacctactgcagccgtctgttcaagcacaaa
cgcagccgcgaccgccacgtcaagctgcacaccggggacaagaagtaccactgccatgag
tgcgaggctgccttctcgcgcagcgaccacctcaagatccacctgaagacccacagctcc
agcaagcccttcaagtgcaccgtgtgcaaaaggggcttctcttccaccagctccctgcag
agccacatgcaggcccacaagaagaacaaggagcatgtggagcgggccgagaaggacgtc
aacatgaaggacgacttcttcatgtgcgactactgcgaggagaccttcaaccagacggac
gagctggagaagcacgtgctggaccaccacccccagctctcagagaaggccgacctgcag
tgcatccactgtcctgaggtcttttcagacgagagctccctgctcagtcacatcgaccat
acacatgccaacaagaagcacaagtgccccatgtgcccggaacagttcttctctgtggag
gatgtctactgccacatggacagccacaggcagccagactccagcaaccacagtatcagc
cccgaccctgtgctgggcagtgtggcttccatgagcagtgccacaccggattccagcgtg
tctgtggaaagagggtccactcccgactccaccttgaaaccttccagagcacccaggaag
atggcttcaggtgaacaggaggagagtctaacctggccgactaagatcacctacagctgc
ccctattgctccaagagggacttcaacagcctggctgtcctggagatccacctcaagact
atccatggcgataagccccagcaaagccacgcatgccagatctgcctggactcgctgccc
accctgtacaacctgaacgagcacgttcgcaaagcccaccgctccagcaacgccttcccc
atgctgcagttcagcaatgtctctgcctttcactgcaactactgctcagagaccttcgct
gacatcaacagcttgcaggagcacatccgggtgacccactgcatccccagctctgccacc
accctggaggggaaccacgcctttttctgcaatcagtgttccatgggcttcctgacagag
tcctccctcacggagcacatccagcaaatccactgcaacgtgggcagctccaagctggag
tcgccggctattcagccttcacagtccttcatggaggtctactcctgtccttactgcacc
aactcgcccatctttggttccatcctgaagctcacgaagcacatcaaggagaaccacaag
aacatcccactggccaacaacaagagggcaaaggcggaacacagcccggtgtcatcggac
gtggaggtgtcctccccgaagaggcagaggctgagtgctaacaccaccccaggatctaat
ggggagtacccgtgcaaccagtgtgatctcaagttcgccacttttgacggcttccagact
cacttgaagtctcatctggagttactcttgaggaagcagtcctgcccccagtgtaaagag
gacttcgactcccaagagtctttgctgcagcacctgacagtccactacatgaccacgtcc
acccactatgtctgcgagagctgtgacaagcagttctcctcagtggacgacctgcagaag
cacctgctggacatgcacaccttcgtcctgtaccactgcaccctctgtcaagaggtcttt
gactctaaggtctccatccaggtgcacttggctgtgaagcacagcaacgagaagaagatg
taccggtgcactgcctgcaactgggacttccgcaaagagacggacctccagctgcacgtc
aagcacagccacctgggcaacccgaccaaggcccgcaagtgcatcttctgcggggagatg
tttggcaccgaggtggaactgcagtgccacatcaccactcacagcaagaagtacaactgc
aggttttgcagcaaggccttcaacgccatcaccctcctggaaaagcacctgcgagagaag
cactgcgtctttgagaacagcaacagccagaacggcacccctaatggagtgcctcccgtc
agcaagaggacagaggctccagaccaccagaacatgctgatgaagagccaggagacggtt
aatagccacgaagccagcgaggacgatgtggacgcctccgagcccatgtatggctgcgac
atctgtggggccgcttacaccatggaggctctgcttcagaaccataggctgagggatcac
aacatccagcctggggaagacgactgcaggaggaagaaagcggagttcatcaaagggagc
cacaagtgcagcgtttgctccaggacgtttttctcggagaacggcctcagggagcatgtg
cagactcaccgaggccctgccaagcattacatgtgccctatatgtggggagcgcttccct
tcccttctgacgctcacggaacacaaggtgacccacagcaagagtctggacactggcacc
tgtcgcatctgcaagatgcccctgcaaagcgaggaggagttcatagagcactgccagatg
cacccggacctccgcaattccctcacaggcttccggtgtgtggtgtgcatgcagacggtt
acctccacgctggagctgaagatccatggcaccttccacatgcagaagctggcgagcagt
tctgcctcctcgtctcccaacggacagctccagaagctctacaagtgtgctctgtgcttg
aaggagttcaggaacaaacaggacttggtcaaacttgatgtcaatggcctgccctacggc
ctgtgcgctggctgcatgaacagaggcactaacggacaatcatcaagtggaacccagcag
gagcccagcgaaaagcctgtcaccggcctccggtgcccagaatgtgctgtcaagtttgaa
acactagaagacttggagagccacatccagctagatcaccgggagacgacccctgaaact
aacagccaaaagaaggttcctgagacctcgccagcccctaaaaaaaagacataccagtgc
attaagtgccagatgacctttgagacggagcgagagatccagatccacgtggccaatcac
atgatcgtgctgtctgcatgctgtctcgtgctgtggaaaccagagtctagctgtttgtgg
ttctggaatgaggtctgcgctcgaggaggcagaggaggtggaagtacggttgatcatcac
gatagcaaagaggaaggcatcaatcatgagtgcaagctgtgtaaccagatgtttgactct
ccagcgaagctcttgtgtcacctgattgagcacagcttcgagggcatgggaggcacgttc
aaatgccccgtgtgcttcacagtctttgtacaggccaacaagctccagcagcacatcttt
gcagtacacgggcaggaggacaagatctacgactgctcccagtgtccgcagaaattcttc
ttccagactgagctgcagaaccacacgttgagtcagcatgcacagtga
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integrated database retrieval system
