KEGG   Polyodon spathula (Mississippi paddlefish): 121325503
Entry
121325503         CDS       T07273                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pspa04121]
    121325503
Enzymes [BR:pspa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121325503
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121325503
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_4 zf-rbx1 Prok-RING_4 zf-UDP zf-C3HC4_4 zf_RING_Vps8 zf-RING_10 zf-RING_6 Rad50_zn_hook Rtf2
Other DBs
NCBI-GeneID: 121325503
NCBI-ProteinID: XP_041123969
LinkDB
Position
1:101579268..101604744
AA seq 210 aa
MVYLSYRFSLIPNSQKMSTTPRKRRRSVSANTHPHKRSQVTNPPSAPEMQTETEMIEVLE
NTRLPSEEVVDLTCEGSEPLVVDLTNNDSVVIVDEGPCSRRSGGGASYVLSSDEEDSTEG
EVYVSANVGKPAFLPPVVNSSSARATSGTVSCPICLDTCAEILQSGRLIVSTKCGHLFCS
QCLRDALKHAHSCPTCRKKLTHKQYHPIYI
NT seq 633 nt   +upstreamnt  +downstreamnt
atggtatatctatcatatcggttttcattaatacctaactcacaaaagatgagcactact
ccaagaaagcgacgcagaagtgtatctgcaaatacacatccacataaaagaagccaagtg
acaaatcctccttcagcgccagaaatgcaaactgaaactgagatgattgaagtgttggaa
aacaccagattgccaagtgaggaggtggtagatctcacttgcgaaggctcggagcccctg
gtggttgacttgacaaacaacgactcggtggtgattgtggatgaaggcccttgtagcaga
agatcaggaggcggtgcgagttatgtgctcagcagtgatgaagaggactccaccgaaggg
gaagtttatgtttctgccaatgtaggcaaaccagccttcctccctcctgtggtgaacagc
agcagtgccagggctacatctggaacagttagctgtccaatatgcctggacacctgtgca
gagattcttcaaagcgggcggctcatagtctcaacaaaatgcgggcacctgttctgcagc
cagtgtctccgtgacgcactcaagcatgctcattcctgcccgacttgcagaaagaaactc
acccataaacagtaccatcccatttacatttag

DBGET integrated database retrieval system