Polyodon spathula (Mississippi paddlefish): 121325528
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Entry
121325528 CDS
T07273
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04519
Cadherin signaling
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121325528
09133 Signaling molecules and interaction
04519 Cadherin signaling
121325528
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121325528
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121325528
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121325528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121325528
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121325528
SSDB
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GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
ZNF704_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121325528
NCBI-ProteinID:
XP_041124030
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All DBs
Position
13:complement(1409455..1497430)
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AA seq
647 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMIAFKDEGEQEEKISENSSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKSRESLEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLQNGSL
SPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVGPFCLEFPGQGDLSLHQFQL
SNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQADVDPKTGEQLGQHMETLTGCSW
MLRDLNFLKSCTGIPRPPHPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFR
HPYPTALTVNASMSSFLNSRFPPHMVPPHHSLHTTGIPHPAIVTHSVKQESSQSDIGSLN
SSKHQDQKKEDEKKKQPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL
TREEQAKYYELARKERQLHMQLYPGWSARDNYGGNQGKKKKRKRDKQQGEANEHREYFPN
PCLSLPPITDLSAPKKCRARFGLDQQNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLL
DSPPSSPSLLASPSQDSKPQTEQMHPLSLTMKPDSLAHLSMPPSLARLENYASKTGTQNG
ALEHQAATSQQPASLPLARPSTSLLRSHNLLTGSQAQPLSLVTKSVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgatctgggggcgaacgatgaaatgatcgcc
ttcaaagacgaaggcgagcaggaggaaaaaatctcggagaactcttcagcagaaagggat
ttagcagacgtcaaatcttctctagtaaacgaatcagaaacgaatcaaaacagctcgtca
gattcagaggcggaaagacggcctccgcctagatcagaaactttcagagacaaatcaaga
gaaagtttagaggcagcaaaaaggcaagatggaggtttgtttaagagcccaccatacccg
ggttacccgtttataatgatccccgatctcacaagcccttaccttcagaatggatcactc
tctccaactgctcgaacatacctccagatgaaatggcccttacttgatgttcaagcagga
agcctacaaagtaggcaagctcttaaggatgccaggtccccatctccagcacacatcgtt
ggccccttctgcttggaattcccaggacagggagatctgagtcttcaccaatttcagttg
tcgaacaaagtgcccgttgtgcagcaccctcatcatgtgcacccgctcacgcctctgata
acgtacagcaatgagcacttcacaccaggaaacccccctccgcacttgcaggccgatgtg
gacccgaaaacaggtgagcagcttggacaacacatggagactttgactggatgcagctgg
atgcttcgagacctgaacttcttaaagagttgcactggtattcccaggcccccacatcca
gatatttctccatattatcccttatcgccgggtacagtgggtcagatcccccatccgctg
ggatggttagtaccacagcaaggtcagccagtttatccaatcacaacaggagggttcagg
catccatacccgactgctctcaccgtcaatgcatccatgtctagttttctcaactctagg
tttccaccacacatggtcccgccacaccatagtttacacacgacagggattcctcatcca
gctatagtcacgcactccgtcaaacaagagtcttcccagagcgacattggttctctcaac
agctcaaaacatcaggaccaaaaaaaggaggacgagaagaagaaacagcctcacatcaag
aaacctttgaatgcatttatgttgtatatgaaggaaatgagagcgaaagtagtggcggaa
tgcacgctgaaagaaagcgcggctatcaatcaaattcttggacggaggtggcatgcgctg
actagagaagaacaggctaaatactatgagctggcaagaaaggaacggcagctccacatg
cagctgtaccccggctggtcagcaagagacaactatgggggaaaccaggggaaaaaaaag
aagagaaaaagggataagcagcaaggagaggccaatgaacacagagaatattttccaaac
ccatgcctttcacttcctccgattacagacctgagcgctcctaagaaatgccgagcgcgc
tttggccttgatcaacagaataactggtgcggcccgtgcaggagaaaaaaaaagtgcatt
cgctacatacaaggtgaaggcagctgtgccagcccaccctcttcagatggaagcttatta
gattctcctccctcttcaccttccctgctagcctccccctcacaagactctaaaccacag
actgaacaaatgcaccctctttcactgactatgaaacctgattccttggcccacctttca
atgccaccatcgttagctagattggaaaactatgccagcaagaccggcacccagaatggg
gcattggagcaccaagccgccacatcacaacagcctgcatccttgccactggcaaggcca
tccacgtccttgttgcgttcccataacctgctcactggctcacaagcccagcctctttcg
cttgtaaccaagtctgtagattag
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