Polyodon spathula (Mississippi paddlefish): 121325529
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Entry
121325529 CDS
T07273
Name
(RefSeq) genetic suppressor element 1-like isoform X1
KO
K27276
genetic suppressor element 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121325529
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121325529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3736
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
121325529
NCBI-ProteinID:
XP_041124072
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All DBs
Position
13:complement(35081273..35335261)
Genome browser
AA seq
2055 aa
AA seq
DB search
MNDPRVDKEFTPISRKHRLMAAVLPEEESVLPGNSSRSDRNGIGIVYCFVCGGGVTPGKE
LKLQINYQRENVPFFPFLQHQEPAPGAEEVTPDGCVTVCAVCQSFLGEQWNSFERTRTPI
EKRMYWLKRPYQCDSRRIPQEWNISYDLERRMSVSSQNCDAHDSEFSSLSDNENMSDQEL
DFVDRPVTHKEKSTRIPTSNKNSKERLAKYNDIKSCHDSPMGTRYLVSGYAAQDAQKSDN
VLQPGRSVQSMNHAAQSSVSLAQLQEFLPQRSYDTPYAETPAQDNGIIIRNKQWLPEENA
KHPDSRQHAVYSSCSTRDPLVPLQSRKAADVADAAASLSPVGALNISDRGNVDNLFKHSD
SSHSNHGGGCSDSDNEINITSDNDQENVLDIASSREHVIKLDRQIRETGSVIAKSLSNSP
AEECACYICGSKLSQNNQHKVYVQKQESISNQPFFPFLWLHSPPPGALPLSPGGCTLVCA
CCHSSLMQQWQGFELANVPVLQRLYVVPLNAGTSVLAPRDSMNHKLEKATAREACYLCGE
DCCRDLIVTCSKVFNGNPRSTMHFPFINLLPCPPNAKAVNNGKVHCCQTCFSILEDIWVT
YKACLSEELITSVNSFLSRYHQAVTGAVTHSSSLSHQSPRMGHTSVCYLCGVELPAGREF
QLSVNPPGRCGEREPFFPFLTVHPPAPRSKPSDSTGLVSTCVLCYHDLLGQWVQHEGRGS
QPTSSPWSRQYGVDTFVCFFCRQEKKRCLGLKAVQVARLPVFLYAPRVSNTLVVDDGKTL
TIGSCVDCKAVVLAGQNMKQNCLLDSVSPPGKHKPSFSALEVASVNRKLPEAGVFNPVGE
PSEGTRPGRSGVNVDAPPPITLDAETADHQRTSMSHEPKSPSLGMISTATRTTATVSPLT
PSPLSGSIVPNGSPAANNTLSVQSAHSSSFAAALRKLAKQAEEPRGSSISSESSPVSSPA
TNHSSPASTPKRGPMGPIIVPQGCHSVPSTPPVVTIAPTKTVNGLWRSEGRQTESGSRGS
SRDRLGPEHAQQQEKVGSSVPAHLLGNPYAFGLNPNSVVHDTRFQPLNLPRQVHHVVPPA
SVPEDYLRGFRPYPTPEDLRMSSIPSLGLDPATAAAYYHPSYLTHPPFSAYRMDDSFCLS
ALRSPFYPMPVAGSMPPMHPSAVHMHLPGVRYPGELSHSSLSALQSERISERLQMEDELR
QREREREREREREREKEREREVEREKEREREREREREKELEREREKEREREREREREKER
AREKELQASKALENHYLAELHALRGQPAEDRAKPAERLTPNRPDKAKEPALLAPKPVQPG
LHPAPIPSSHLSVPSLISSHSGFLPHSGVPGLVGGPTGSLATALLLQRTNEEEKWLARQR
KMRQEKEDRQFQVSEFRQQVLEQHLDIGRPPEGDPWSDGHRPVHESMMREHLQHLGAPPP
LISPKPQHPPPSTTLWNPASFVDSNPEPRRAHEPLHPGHYEHARQALSLVKGERLYSSEK
LDESAKKKEMTEKYQPVRGPSAHEQGGHSYGTFLAELEKSAQTILNQQRASLSLPSQYSE
LSASHKASSSPYRNHQGVPRAPDPMLVYDEFLQQQRRLVSKLDLEERRRREAREKGYYYD
LDDSYDESDEEEVRAHLQRVAEQPPLKLDESSEKTGFLQVFGLTTRSHKEELLEQKRRKR
RRMLRERSPSPPAVKNKRQTPPPPPLSTRYTADQMNCSAELEEKKRFLTIFSLSHVNTHQ
RKVDQTTLHPLSDSEISPSARAGTPSLPDVKKAMDTSKPEHLQQSEVPRPKEAAAAAVPT
FPDGDKARPGEGHAVKKNTSLLNSIRAQNTPKEGPHSQNGRSKPWESFTAEEFAHQFHES
VLQSTQKALQKHKGSAAGQISEPNHKLESLVHYNIPELQSSVRAPHPQHNGQHDTIAARK
ELTVVREEESEEEEDTEEEEEEEEEEEEDDDDDEAPRPKWQGIEAIFEAYQEYIDEHSIE
RQVLQSQCRRLEAHHYNLSLTAEQLSHSMGELMSQKQKLASEREKLQAELDHLRKCLAQP
QMHWSRGYFKGYPPR
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccccgagttgataaagaatttacaccgatctccagaaaacaccgactcatg
gctgcagttctgcctgaggaagagagcgttttgcccggtaacagttccagatccgaccgt
aatggcattgggatagtttattgcttcgtttgtggtgggggtgttacgcctggaaaagaa
ctgaaacttcaaattaattaccagagagaaaacgttccatttttcccgtttttgcagcac
caggagccagcgccgggggctgaagaagtgaccccagatggatgtgtcacagtatgcgcc
gtgtgtcaaagttttctcggggagcagtggaactcctttgaaagaaccaggacccctata
gaaaagcgaatgtactggctgaaaagaccctatcagtgtgactcaagaagaattccccag
gaatggaacatctcctacgacctggaaagaaggatgagcgtgagtagccaaaattgtgac
gcacatgattcggaattttcatccctttctgataacgagaatatgtccgatcaagagctt
gattttgttgacagaccagtcacgcataaagaaaagtccaccagaatccccactagcaac
aaaaattctaaagaaagacttgcaaaatataacgacataaaaagctgccatgattctccg
atgggaacccggtaccttgttagtggttacgccgcccaggacgcacagaaatcggataat
gttcttcagccgggccgttctgtgcaaagtatgaatcacgcagctcaatcgtctgtatcg
ttggctcagttacaggaattccttccacagcggtcctatgacaccccttatgccgagaca
cctgcgcaagacaacggaatcattatacgcaacaagcagtggctaccagaggagaatgcc
aagcatccagactctcgccagcatgctgtctatagcagctgtagtactcgggatcccctt
gttccgttgcaaagtcgtaaagcagcagatgttgcagatgcagccgcatcgttatcacct
gtaggcgccttgaacatttcagaccgcggcaatgttgacaacctgttcaaacacagtgac
agcagccatagtaaccacgggggtggctgttctgactcagacaatgaaataaacataacc
agcgataatgaccaagaaaatgtgcttgatatcgcaagcagcagggagcatgtaataaag
ctcgacaggcagatcagggagactggcagtgtaatagcaaagtccctgagtaacagccct
gcagaggagtgtgcatgctatatctgtggaagtaaactatcccaaaataaccagcataaa
gtgtacgtgcaaaaacaggagagcatctcaaaccagccctttttcccctttctgtggctc
cacagcccgcccccaggggccttgcctctcagcccaggtgggtgcactctggtatgcgct
tgctgccattcctccctcatgcagcagtggcagggctttgagttggctaatgtgccagtt
ctgcaacgcctatatgtggtccccttgaacgctggcacttcagttttggcccccagagac
agcatgaaccacaagctagagaaagccacggcacgtgaagcttgctacctgtgtggcgaa
gactgctgcagagatcttatagtgacctgttccaaggttttcaatggcaatccaaggagt
accatgcactttcccttcataaatctactgccatgccctcccaatgccaaagctgttaat
aacgggaaagtacactgctgtcagacatgctttagcattttagaggatatatgggttacc
tacaaagcatgtctaagtgaggagcttatcacctccgttaatagctttttgagtcggtat
caccaggctgtcactggggcagtaacccactcaagcagcctgagccaccagtctcccaga
atgggccacacctcagtttgttacctgtgcggggtagagctaccagcaggaagggagttt
cagctgagtgtgaacccaccgggccggtgtggagagagggaacctttcttcccctttttg
actgtccatcctcccgcacccaggtccaaaccttctgattccactggcctggtgtccacc
tgtgtgctgtgttaccacgacctgttaggccaatgggttcagcatgaaggccgaggcagc
caaccaaccagcagcccatggtctaggcagtacggcgtggacacttttgtgtgcttcttc
tgcagacaggagaagaaaagatgcctgggcttaaaagcggtgcaagttgcacgactgcct
gtgtttctgtacgcccctcgggtgagcaacactctggtggtggatgatgggaaaacattg
accattgggtcttgtgtggattgtaaagctgtggtactggctggccaaaacatgaagcaa
aactgcctattggacagcgtctctcctcctgggaaacacaagccttccttctctgccctc
gaggtggcgtcggtgaacaggaagctccctgaggcgggtgtgttcaacccagtgggagag
cccagtgaaggcacgaggcctgggaggtcaggggtcaacgtggatgctccccctcccatc
actttggatgcagagaccgccgatcaccagcgtacaagcatgagccatgagccaaagtca
ccttcattaggaatgatctcaacagcgactcggaccactgccacagtgagccccctgacc
ccgtcccctctcagcggctccattgtgcccaatggcagccctgccgccaacaacactctg
tccgtccagtcggcgcattcctccagctttgctgccgcgctccgcaagctcgccaaacaa
gccgaagagccaagagggtcgtcgattagcagtgagtcttccccggtctcgtctccggcc
accaatcacagctcaccagccagcacgcccaagcggggacccatgggtcccatcatcgtt
ccccaggggtgccacagcgtgccaagcacccctcccgtggtcaccatcgcacctaccaaa
accgtcaacggcctctggaggagcgaaggccgacagacggagtcagggtctcggggaagc
agccgggatcgtctaggcccagagcacgcccagcagcaggagaaagtgggctcctcggtt
ccagcccacctcctcgggaacccgtacgcctttggactgaaccccaactctgtcgttcat
gacacacgcttccagcctctcaacctccctcggcaggttcatcatgtggtcccccctgct
agtgtcccggaggattacctccgcggcttcagaccctaccccacacccgaggacctcagg
atgtcatcgataccatccctgggcttggatcctgccactgctgctgcctactaccacccc
agctatctcacccacccacccttctctgcatataggatggacgactcattctgcctgtca
gccctgaggtctcccttctacccaatgccggtggcaggctccatgccccccatgcacccc
tcagcagtccacatgcacctgcctggagtgagataccctggagaactgtcccactcctcc
ctgtctgcactgcagtccgagcgcatctctgagaggctccagatggaggacgagctgcgg
cagcgtgagagggagcgtgagagagaacgggagagggagcgggagaaggagagagagcgt
gaggtggagcgggagaaggagagagagcgagagcgtgagagggagagagagaaggagctg
gagagagagcgggagaaggagagggagcgagagagggagcgtgagagggagaaggagcgg
gctcgggagaaggagctgcaggcctccaaagcccttgagaaccactacctggctgagctg
cacgctctgcggggtcagccagccgaggaccgagccaaaccggcagaaagactgacgcca
aaccgacccgataaagccaaggagcctgcactgcttgcacccaagccagtgcagccaggt
ctccacccggcgcccatcccatcgtcccacctctccgtgcccagcctcatctccagccac
agcggcttcctgccacactccggggtaccaggactggtaggtggtcccacgggatccctg
gcaacggccttgctcctgcaacgcaccaacgaggaggagaagtggctggccaggcagagg
aagatgcggcaggagaaggaggaccgccagttccaggtgtcagagttccgccagcaggtc
ctggagcagcacctagacattgggagaccacccgagggggacccgtggagtgatggccac
cgacctgtccatgagtcaatgatgcgggaacaccttcagcatctgggggccccaccgcct
ctcatctcccccaaaccccagcacccccctccctccaccacgctgtggaatcctgcctcc
ttcgtcgacagcaaccctgagcctcgtcgggcgcacgagcccttgcatcctggtcactat
gagcacgcccggcaggccctgtccctggtgaagggggagaggctctacagctctgagaag
ctagacgagagtgccaagaagaaggagatgacagagaagtaccagcccgtccgggggcca
agtgcccatgagcagggtgggcattcctatggcaccttcttagcagagctggagaaatca
gcacagaccatcctgaaccagcagagggcatctctgtcgctgcccagccagtacagtgag
ctgagtgcctcacataaggccagctcctctccctacaggaaccaccagggggtgccacga
gcacctgaccccatgctggtgtacgatgagttcctgcagcagcaacgcaggttggtcagc
aagctagacctggaggagaggaggaggagagaggccagggagaaaggctattactacgac
ttggatgactcctatgatgaaagcgatgaggaggaggtgcgagctcaccttcaacgagtc
gccgagcagccgccactcaagctcgacgaatcctccgagaagactggcttcttgcaggtg
tttggtctgacgactcgctcgcacaaggaggagctgctggagcagaagaggcggaagagg
aggaggatgctgagggaacgaagcccctcccctccggccgtgaagaacaagcggcagacc
cctcctcctcctcctctcagcacgcgctacaccgccgaccagatgaactgcagcgcggag
ctcgaggagaagaagagattcctcaccatattcagcctatcgcatgttaacacccatcag
agaaaagtggaccagacaacattacacccgctctcagactctgagatctcgcccagcgcc
agagcaggcactccctcccttcccgacgttaagaaagccatggacacaagcaagccagag
cacctccaacagtccgaagtgcccagaccaaaggaagcggcagcagcagcagtacctacc
tttcctgacggggataaggccagaccgggcgagggccacgctgtgaagaagaacaccagc
cttttgaacagcatccgggcccagaatacacccaaggagggcccccacagccagaacggc
aggagcaagccctgggagagcttcacagcagaagagtttgcccaccagttccacgagtca
gtgctgcagtccacacagaaggccctgcagaaacacaaaggatctgcagcagggcagata
tcagagccaaatcacaagctggaatctttggtccattacaacattcctgagctgcagtct
tctgtcagggcaccccatccgcagcacaacggacagcacgacaccattgcggcacggaaa
gagttaaccgtggtgcgggaggaagagtctgaggaggaagaggataccgaggaggaggag
gaggaggaggaggaggaggaggaggatgatgatgatgatgaagctcctcgaccaaaatgg
cagggaatcgaagccatcttcgaggcttaccaggaatacattgatgagcacagtatcgag
cggcaggtgctgcagtcccagtgcaggaggctggaggctcatcactacaatctgagtcta
actgcagagcagctctcacacagcatgggggagctcatgtcccagaaacaaaagctggcc
tctgaaagggagaagcttcaggctgaactggaccacttacgaaagtgccttgcacaacct
cagatgcactggtcaaggggatacttcaaggggtacccccccaggtga
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integrated database retrieval system
