Polyodon spathula (Mississippi paddlefish): 121325543
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Entry
121325543 CDS
T07273
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121325543
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121325543
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121325543
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
121325543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
FAM92
HR1
Motif
Other DBs
NCBI-GeneID:
121325543
NCBI-ProteinID:
XP_041124128
LinkDB
All DBs
Position
13:complement(41655493..41717949)
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AA seq
1185 aa
AA seq
DB search
MFFIRKAIRSLRILSRTVLLLLRSKRHSDGGRPSRAVSTMSLSVRPSRRITSSSISRSQS
FAGVNSSDKHYRNRAVFSTLTNSRKSPSRASRMFALSHKSMPPKVPQPERLDEVYEALKR
GLQAYLQVHQLELDSLTRQMRESKRNSRLGFLYELDKQVKAIERFMRRLEFHLSKIDELY
ESYCMHRRLRDGANKMVKAYTAGSPGSREARESLAEANKGYKEYTENMCMLESELENQLG
EFQVKMKGLAGFARLCAGDQYEIFMKYGRQRWKLRGRIEINGKQVWDSEEMVFLPLITEF
LSIKVTELKSLANHVVVGNVCCETKDLFAALPQTVAVDINDLGTIKLSLEVTWNPFDKDD
QSSTTSTVNKSSTVNKRFSTYNQSPPDTPSLREQAFYNPPQATTEQHRWSLLDVFRETLV
EKLSQSCSCGDVTSSCLGVARDTKLYNMLRRQEEMENPAAWSNSSESSDDSSSPQLSVNQ
RHAQKTVVQPEIQAEAPVIEISFAPKEEPVTTGDPASQEEELCEEDREKIEEVVSNGHVR
YSRSLSHISEASADAAIVESVTTETVAREAAATETFPTDTVAEATVSFDAMSVDDVIMEV
PSTPESVVKTPDLKEQETQQGAMDSQSAVSSKPKDDGDVTRNSVVVVAQLLETTTQSMDQ
LSSPALTEAGVVTEDLAAAPRTGQRQSQQGASEVERPAQEAPRQGQAEDTRAALSEKAKP
VDSGVEEALNSLISMLDDYRGQFPELQLLEQETRHLEEILVQRQGLCRSRSSSISLTVEH
ALESFDFLNTHDQEDSVSGSSDEEREGEQQQEEEEEEGDASRPDSLQQGSSVPGEVLSEE
IWLLGDSEVSPDPMSTGSEHLDRALVVHLDNCSHLLLQLGTFGPLRCREMYALDKLLREA
RVLGLVCKVSEEKSGVVNSAEEVLPFLESKHKALAFWSQCTESVNVYTTTAERFLQSLHS
VFSARLQDQHSSRADTVFLKLAERVLEKRLPKRGCSGRQELITLFQYWSHLEDEGVSALD
TYITELAEQVSLIQSLQSGDQDAVLKTLKRVPETQLQKEGLRAISLLLLDKRIKVSNAAL
ALLRSLADSPKSRERALVSCLELLEDESVETRVAGCKALLCLKAKESIDQLVYLYQTDKD
DVREAAKQALLSFGDEGKLAQRHAEDSQDGLPRLFAPGSMASTAF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgttttttattcgaaaggccatacgatccctccgcattctcagccggactgtcctcctc
cttctccggagcaagcgacacagtgatggggggcgtccctccagggcagtgtccaccatg
tctctgtccgtaaggccgtcgcgccggatcacctcgtcctccatcagtaggagccagtcg
ttcgctggagtgaactcatcagataagcactacaggaatcgggccgtgttcagcaccctg
accaactccaggaagtctccctccagggccagcaggatgttcgccctctcccacaagtcc
atgccgcccaaggttcctcagccggagcggctggacgaggtctacgaagcgctcaagagg
ggcctacaagcgtacctgcaggtccatcagcttgagctggacagcctgacccgacagatg
agagagtccaagaggaactccagactgggcttcctgtatgaattggacaagcaagtgaaa
gccattgagaggttcatgcggcggctggagtttcacctgagcaagattgacgagctgtac
gagtcctactgcatgcaccggagactgcgggatggagccaataagatggtgaaggcttac
actgcgggctcgcccggcagcagagaggcacgagagagcctggcagaggccaacaagggc
tacaaggagtacactgagaatatgtgcatgctggagagtgagctggagaaccagctggga
gagttccaggtgaagatgaaaggactggctggttttgcgaggctgtgtgctggggaccag
tatgagatcttcatgaagtacggccggcagcgctggaagctgcggggccggatcgagatc
aatgggaagcaggtgtgggacagcgaggagatggtcttcctgcccctcatcacagagttc
ctctccatcaaggtaacagagttgaagagcctggccaatcacgtggtagtggggaacgtg
tgctgtgagacgaaggatctgttcgccgcgctcccccagacagtagcagtggatatcaac
gacctcggaacaatcaaactcagcctggaggtgacatggaacccattcgataaggacgac
cagtcttccacgaccagcactgtcaataagtcctccactgtgaacaagagattctccacc
tacaatcagagcccaccggacacaccttccctccgggagcaagctttctataaccctccc
caagccactacagagcagcacagatggtccttattggatgttttccgagagactttggtt
gaaaagctgtctcagagttgctcgtgtggcgatgtcacatccagctgtctaggagttgct
cgtgataccaagctctataacatgctacgccggcaggaggagatggagaaccccgctgcc
tggtccaactcctcggagtcctcggacgactcgtccagcccacagctctccgtcaaccag
cggcacgcccagaagaccgtggtccagcccgagatccaggctgaagcccctgtcattgag
atctccttcgcccccaaggaggagcctgtgaccaccggtgatccagccagccaggaggag
gagctgtgtgaggaggacagggagaaaatcgaggaggtggtgtccaacgggcacgtgcgc
tactcgcggtctctcagccacatcagcgaagccagtgcggacgctgccattgtagagagc
gtaaccacggagactgttgccagggaggctgctgccacagagacttttcccacggacact
gttgcagaggctactgtctcttttgatgccatgtcagtggatgatgtcatcatggaggtt
ccttccacacctgaaagtgtggtgaaaaccccagacctaaaagaacaggaaacccagcaa
ggggccatggactctcaaagcgcagtgagcagtaagcccaaggacgatggggatgtgact
aggaactcagttgtggtggtagcccaactgctggaaaccacaacccagtccatggaccaa
ctttcttccccagccctcacagaggcgggtgttgtgacagaggatttggctgcggcccct
aggactggacagcggcagagccagcagggggcctcggaggttgagaggccagcacaggag
gctccgaggcaaggccaggcagaggacactcgggcagcgcttagtgagaaagccaagcca
gtggacagcggggtcgaggaggccctaaactcactgatttccatgctggatgactacaga
ggccagttccctgagctccagctgctggagcaggagacgagacacctggaggagatcctc
gtgcagaggcagggcctgtgtcggagccggtcctccagcatcagcctgacggtggagcac
gcactcgagagcttcgacttcctcaacacccacgaccaggaggacagcgtgtcggggagc
tctgacgaggagagagagggggagcagcagcaggaggaggaggaggaggagggggatgca
agcagaccagacagcttgcagcagggcagcagcgtgccgggggaggtgctgtcggaggag
atctggctccttggggactctgaagtgtctcctgatcctatgagcacaggcagcgagcac
ctggaccgggccctggtggtgcacctggacaactgcagccacctgctgctgcaactgggt
acattcgggccgctgcggtgccgggagatgtatgctctggacaagctgctgagggaggcc
cgagtcctggggctggtgtgcaaagtgagcgaggagaaaagcggggttgtgaactctgct
gaggaggtattgccgttcttggaatccaagcacaaagccctggcgttctggagccagtgc
acagagtctgtgaacgtgtacaccacgaccgcagagaggttcctgcagagcctgcactca
gtcttcagcgccagactccaggaccagcactccagcagagcagacacagtgtttttgaag
ctagccgagcgagtgctggagaagaggctgcctaagcgagggtgcagcgggaggcaggag
ctcattaccctcttccagtactggagccacctggaggacgagggtgtgtccgctctggac
acctacatcactgaactggctgagcaagtgtccctgattcagagcctgcagtctggggac
caggacgctgtgctcaagacactgaagcgagtcccagagacccagctgcagaaggagggt
ctgcgagcgatcagcctactgctgcttgacaagaggatcaaggtcagcaatgctgccttg
gcactgctgcggagcctggcagacagccccaaatccagggagagggctctggtatcctgc
ttggaactacttgaggatgagagtgtggagacccgagtagcaggctgcaaggctctcttg
tgtcttaaggccaaagagagcatagaccagctagtgtacctgtaccagacggacaaggat
gatgtgagagaggcagcaaaacaggccctgctgtccttcggtgacgaggggaagctcgct
caacgccatgcagaagactctcaggacggcttgcccaggctctttgccccaggcagcatg
gccagcacagcgttctag
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