Polyodon spathula (Mississippi paddlefish): 121325555
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Entry
121325555 CDS
T07273
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121325555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325555
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121325555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121325555
NCBI-ProteinID:
XP_041124151
LinkDB
All DBs
Position
13:7867688..7888731
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AA seq
1174 aa
AA seq
DB search
MNVNQQAHMTSPYRQPQPTLQGYAQPGYGGPPTQYTPYNSPNPGYQQGPAPAGYSPYSSL
SSKAFPATLASDLSCNSSSPLDLGPVRPTPNSVGPPMSAPQGYSQFTQGDVQNGPPTMSS
QPHRPPVSQSYLPGSQPAYQQYGVPPTNMQQMTNQMSGMHVSGPPPAVSGYAPHSSNSQT
SVSFSGTPSFPPHSVSSQQNSPAASLTHGQPPSQSPFPGAPPPVSQPQYSSVPPASSQPH
YPGAQPPPASQGQFPVGPPSPSQASPFHTPLSNFVPHAGPGVQPVQAPPHSQYLSGPPLP
RQPMQGPPLSQQNHVAPGMQRLPGQAAPPGQGQGVQPQQNGAFGQMSRPQPGYGGSYPGP
QNYGAQPPPPAAPPQKRLDPDSIPSPQVSELPAVQKTRHRIDPDAIPSPIQVIEDDQANR
SSEPFTTEVRGQAPPLVTTNFQVKDQGNASPSYIRCTAYNFPCTSDMAKQSQVPLAAVIK
PLATLPLDEAPPYIVDHGESGPIRCNRCKAYMCPFMQFIEGGRRFQCGFCSCVTEVPPHY
FQHLDHTGKRVDCYDRPELSMGTCEFTATVDYCKNNKIPQPPAFIFLIDVSYNAVKSGLV
DLICAELKTLLDYLPRESSEEDSCIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMF
VPLLDGFLVDVNESRAVINSLLDQIPEMFADTRETETVFAPVIQAGLEALKAADCAGKLF
IFHSSLPIAEAPGKLKNREDKKLVGTDKEKTLFQPQTSFFGNLAKECVAQGCCVDLFLFP
NQYVDVATLGVVPSQTGGSVYKYTYFQVPSDGDRFLNDLRRDVQKQVGFDAVMRVRTSTG
IRATDFFGAFYMSNTTDVELAGLDCDKAVTVEFRHDDKLSEESGALMQCAVLYTSCSGQR
RLRVHNLSVNCCTQLADLYRNCDTDTLINFFAKYACRSILSSPTKTVRDTLINQSAHILS
CYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDMLQPSADISLDDRAYLRQLVTSMDV
AESHVFFYPRLLPLQKLDVEGDSLPTAVRASEERLSKGGLYLLENGLHLFLWVGANVQQE
LLQSVFNTPSFGQIDPSMTNLPVLNNPYSQRLRAIIESFRVQRPRYMKLMVVKQDDKLEL
IFKHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcaagcgcatatgacctcaccgtacaggcagccacagcccacccta
caggggtacgcccagcctggctatgggggaccccccacgcagtacaccccttacaacagt
cccaatccggggtaccagcagggaccagctccagcaggttattctccttactcaagcttg
tcctctaaggcttttcctgctactcttgcttctgacctctcctgtaactcctcctctcct
cttgatctaggtccagtgcgacccacacctaactctgtgggcccccctatgtcggccccc
caggggtacagccagttcacacagggagatgtgcaaaatggccccccgaccatgagcagc
cagcctcacaggccccctgtctctcagtcctacctcccaggtagccagccagcctaccag
caatatggagtcccgcccaccaacatgcaacagatgaccaatcagatgtcggggatgcac
gtttcaggccctccccccgcagtgtccggctatgcaccccactcttctaattctcagacc
tccgtcagtttctctggcactccctccttccctccccactccgtatcctcacagcaaaac
tccccagcagccagcctgacacatggccagcctccttcacagtcccccttcccaggcgcc
ccacctcctgtctcacagccccaatattcttcagtccctccagcctcttcacagccccat
tacccaggggcccaacctccacctgcctcccagggtcagttccctgtgggccccccatct
ccctcccaggcctccccattccacacacccctttccaactttgtcccccatgcaggccct
ggggtgcagccagtgcaggccccacctcactcccagtacctctctgggccccctctccct
cgccagcccatgcaggggcccccgctctcccagcagaaccacgtggcccctgggatgcag
cgcctcccaggtcaggcggcgcccccaggacaggggcagggcgtccagcctcagcagaat
ggtgcatttggacaaatgagcaggccacagcctggctatgggggttcctacccgggcccc
caaaactacggggcacagccccctcctcccgcagcgcccccgcagaaacggctcgaccca
gattccattcctagcccacaagtcagtgagctgcctgctgtgcagaaaacaagacataga
atagacccagacgcgatccccagcccaatccaggtgatcgaggacgaccaggcgaaccga
agcagtgagccgttcacaacagaggtcagaggtcaggcaccaccgcttgtcacaaccaac
ttccaggtcaaagatcaagggaatgcgagcccgagctatataaggtgcacagcctacaac
ttcccctgcacctcggacatggcgaagcagtctcaggttcctctggctgcagtcatcaag
cccttggcgactctgcccctagacgaggctcccccatacattgtagatcacggagagtca
gggccaatccgctgtaaccggtgtaaagcctacatgtgtcccttcatgcagttcatcgag
gggggccggcgctttcagtgtggcttctgcagctgtgtgaccgaggtgcctccccattac
tttcagcacctggaccacactggaaagcgagtggactgctacgaccggccggagctctcc
atggggacatgcgagttcacagcaactgtggactactgcaagaacaacaagatcccacag
cccccagcattcatcttcctgatcgacgtctcgtacaatgcggtgaagagcgggctggtc
gacctcatctgtgcggagctgaagactctgctggattacctgcccagggagagcagcgag
gaggactcgtgtatccgggtgggctttgtcacctataacaaggttctgcacttctacaat
gtcaagagctcgctggcgcagccccagatgatggtggtctcagatgtagcggatatgttc
gtccccctgctggacggattcctggtcgatgtgaacgagtcgcgtgccgtcatcaacagt
ttgctggatcagatcccagagatgtttgctgacacaagggagacggagacggtgtttgcc
ccagtgattcaggctggcttggaggccctgaaggctgcggactgtgcaggaaagctcttt
attttccactcatcgctccccattgcagaagctccggggaaactaaagaaccgggaggac
aagaaattggtcggcacagacaaagagaagaccctcttccagccccagaccagtttcttt
ggcaacctggcaaaggagtgcgtggcacagggctgctgcgtggacctcttcctctttccc
aaccagtatgtggatgtggcgacactgggagtggttccctcccagaccgggggctccgtg
tacaagtacacctacttccaggtgccttcagacggggatcgcttcctcaatgacctgcgc
agggatgtacagaaacaggtcgggttcgacgcagtcatgagggtgcgaaccagtacaggg
atccgtgcgacggactttttcggcgctttctacatgagcaacacgacggacgtggagctg
gctgggctggactgtgacaaggccgtgacggtggagttcagacacgatgacaagctgagt
gaggagagtggtgcactcatgcagtgcgcagtgctgtacaccagctgcagtggtcagagg
aggctgcgggttcacaacctctctgtgaactgctgcacccagctggccgacctctacagg
aactgtgataccgacacgctcatcaacttcttcgccaaatacgcctgccgcagcatactc
agctcccccactaagacagtgagagacaccctcatcaaccagagcgctcacatcctatcc
tgctaccgcaagaactgcgccagcccctcctccgccggacagctcatcctgcccgagtgc
atgaaactcctcccagtctacctgaactgcgtgctgaagagcgatatgttgcagcccagc
gctgacatctccctcgatgacagagcctacctgcgccagctcgtcacctccatggatgtg
gcagagagccacgttttcttctacccgcgcctgctgcctctgcagaagctggatgtggag
ggtgactctctacccacggctgtgcgggcctctgaggagcggctttcgaaaggggggctg
tacctccttgagaacgggttgcatctcttcttgtgggtcggggccaatgtgcagcaagag
ttgcttcagagcgtcttcaacaccccgtccttcgggcagattgaccccagcatgacgaac
ctgccggtgctgaataacccgtactcacagagactgcgggccatcatagagtccttccgg
gttcagagaccgcgatacatgaagctgatggtggtgaaacaggatgacaagctggagctg
atcttcaagcacttcctggtggaggacaagagcgcgagcggcggcgcttcctacgtcgac
ttcctgtgtcacatgcacaaggagatccggcaactgctgagctag
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