Polyodon spathula (Mississippi paddlefish): 121325564
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Entry
121325564 CDS
T07273
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3-like
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121325564
03036 Chromosome and associated proteins [BR:
pspa03036
]
121325564
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121325564
mRNA cycle factors
P-body specific factors
121325564
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
121325564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
Il13Ra_Ig
Motif
Other DBs
NCBI-GeneID:
121325564
NCBI-ProteinID:
XP_041124182
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All DBs
Position
1:complement(102093563..102108884)
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AA seq
947 aa
AA seq
DB search
MSLTAVNDENLGVDPSSNCVSSETCNFLCLSQQPTGRPSILRPSQKENMPLKSLKDVKVC
FQTPMRDPVTRKIISSASKLESNFSLDDCTKALEKLSLETNQAKTADTSAHIENKNNQDS
ECKADANCINTASEVPCPDELPVQSKGAYTIDFDHLDSINPFKSGGGQMGISTPKVGNSP
VKVSKTPEQKKSLVKVTSPENITQGELSLEDTLPVTPRLDNSIPEIKPQKLVETTNDTSS
PVSVKTDASSTDLSCDVPGEGAETVVSKASYNLDLDNLDRINPFSSSNVNSPQPPIGSYN
FDIDVDSIDPFKCGGSKLQNSPIGGGSKPPIESSSLMEDVPKKLEYSKPLEASNCLLKKD
ELVNLEYSRPMTETSLPVTDEPVNETSKPPTETSSPVKDQPMKLEFNFDDGKAKKKPPKN
LGKRPPGSKLSAKKPVASTEIGEPPKMQEVRDKPADDNIPFPKAYHNFELDMLDDPNLNP
FRTDAKVNSSPKLEAVEKVEDASPVSELPKLECHEKPIKDESSAVPTSTKVPTLTENATP
AAEELVPEPPSNSHAIKEDTLPLDHENLTAEMPTMRRSVTESFMDCTASNHGIATDESFR
PGTDFLASGFDEPVDYLEQFGSSMLKESVLRKQSLYLKFDPLLKESPKKSLPTVCNGIPL
PCSVLSRFDEVWDLPAGVENKVQSEQKPKELNIFETSPVDGTAPLVCVVPSAINSLVPDS
SLPTGNAEDPIIEVLKYSQKDMDAAIEEVRREVQEKQKVIDEWQDKYNKLRADYVIMETI
VAEFESTIAQIVDDDQKQKEAAIAEIQKVNEEKQQVLLDLSSMEKSFSDLFKRFDKQKEV
IEGYRKNEETLKRCAQEYLSRIKKEEQRYQTLKAHAEEKISLANEEIAQVRTKSKAETAA
LQATLRREQMKIQSLDRSLEQKAKENEELTKLCDELIMNVQKGGARQ
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgacagcagtgaacgatgagaacttgggagttgatccttcgagtaactgcgtc
agttcagagacgtgcaacttcctttgcctgtcgcaacaacccacagggagaccttctatc
ctgcgcccgtcccaaaaagagaacatgcctctcaaaagtctgaaggatgtgaaggtatgc
tttcagacaccgatgcgggatcctgtcactcgcaagattatttcttccgctagcaagctg
gagagcaacttctcattggatgattgcacaaaggctttagaaaagttatctttggaaaca
aaccaagctaagactgctgatacttctgcacacattgaaaataagaacaatcaagatagc
gagtgcaaagcagatgcaaattgtatcaacacagcaagtgaggtgccttgcccagacgaa
ctacctgttcaaagcaaaggagcatacacaattgactttgaccaccttgattccatcaac
ccctttaagagtggtggtggtcaaatggggatttccactcctaaagtaggaaattcgcca
gttaaggtgtcaaagaccccagaacagaaaaaatccctggtcaaagtgacaagcccagag
aatataactcaaggtgaattatcattggaagatacacttcctgttaccccaaggctggat
aattcaattcctgaaataaaaccacaaaaattggtagaaactacaaatgacacttctagc
cctgtttctgtcaaaacggatgcttcaagcactgatttgtcttgtgatgtacctggtgag
ggtgcagagacggtagtttccaaagcaagttacaatctggatttggacaatctggatagg
attaaccccttttcatcttcaaatgttaactccccacaaccgcctataggatcttacaac
tttgacattgatgttgattccattgatcctttcaagtgcggtggttcaaagctccagaac
tcgcccattggtggtggttccaagccacccattgaaagctcttcactaatggaagatgtc
cccaaaaagctggagtacagcaagcctcttgaagcctccaattgccttctgaagaaagat
gaacttgttaatctagagtacagcaggcccatgactgaaacctctctgccagtaacagat
gaacctgtaaacgaaactagcaagcctcccacagaaacttcttccccagtgaaagatcaa
cctatgaagttggaatttaattttgatgatggcaaggctaagaagaaaccacccaaaaat
cttggaaagagaccccctggaagcaaactgtctgccaagaaaccggtggcatccactgaa
ataggagaacctcccaaaatgcaggaagttcgggataaaccagctgatgacaatattccc
tttccaaaagcatatcataattttgaattagacatgttagatgaccccaatttgaacccc
tttcggactgatgcgaaagtaaacagttctccaaaactagaggcagttgaaaaggtagag
gatgcatccccggtttcagagctaccaaagcttgaatgtcatgaaaaaccaattaaagat
gaatcttctgcggtgccaacgtctaccaaagtacctaccttgacagagaatgcaacacct
gcagctgaggaattggtgccagaaccgccaagcaatagtcatgccattaaagaggacaca
cttccattagatcatgagaatctgaccgcggagatgccgacgatgcgaagaagtgtaaca
gaatcatttatggactgcactgcgtctaaccatggcattgcaacagatgaatcattcagg
ccaggaacggactttctagcttcgggtttcgatgagccagttgattacctggaacagttt
ggatcatccatgttaaaagaatctgtgctgagaaagcaatccctgtacttgaagtttgac
ccattgctgaaagaaagcccaaagaaatctctgcccacagtgtgcaatggcataccactc
ccgtgttcagtcctttccaggtttgatgaagtgtgggatttgccagctggagttgaaaac
aaagtgcagagtgagcaaaagcctaaggaactgaatattttcgaaacgtccccagtggat
gggacggctcctctggtgtgtgttgtgcctagtgccataaactctcttgtccctgactct
tcactccccactggtaatgcagaagatcctatcattgaagtcttaaaatacagtcaaaaa
gacatggatgctgccattgaggaagtcagacgagaggttcaagaaaaacagaaagtaatt
gatgagtggcaggacaagtataacaagctgcgggcggattatgtgataatggaaacaatt
gttgcagagtttgaatcaacaatagcccaaattgtagatgatgatcagaagcagaaagag
gcagctatagctgaaatccagaaagtcaatgaggagaagcagcaggttctccttgacttg
agttcaatggagaaatctttttcagacctctttaaaaggtttgataaacagaaagaagta
atagaaggttacagaaagaatgaagaaactttaaaaagatgtgctcaagagtatctgtct
agaattaaaaaagaggaacagaggtaccagacactgaaggctcatgccgaagagaaaata
agccttgccaatgaggaaattgcccaggttagaaccaagtctaaggcagaaactgcagca
ctgcaggcaactttacgtcgggaacagatgaaaatccagtcgctggacagaagtcttgaa
caaaaggcaaaagagaatgaagaattaacaaaactctgcgatgaactcataatgaatgtg
caaaaaggtggagcacgccaatga
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