Polyodon spathula (Mississippi paddlefish): 121325565
Help
Entry
121325565 CDS
T07273
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121325565 (nop2)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
121325565 (nop2)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121325565 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
121325565
NCBI-ProteinID:
XP_041124180
LinkDB
All DBs
Position
13:complement(28345764..28361589)
Genome browser
AA seq
699 aa
AA seq
DB search
MGRKLDPTNKVKRGPGRKSRKQKGAETEIPKFLQDDDEGPKRLSSRGRKRAGKRVFQKKN
KMETERKDLPACKTPTANQDKAVPKKGFSDNNAEWLRPAKRKRAAGEEEEEESDSEGEGE
WKNEEGESSEEEMVDDYGAEEGEGESEKIGGGELWSAEEESSEEEEEGDEDSELLPIERA
AERQKKRALLEKERGEREEESEEEKVEEEDDLQLNIEELEKFTLPSGQEIEKESVQPPDL
QVVHQRIKDNVEVLGDFSKKREEGREREDYLRLLKHDLAMYYSYNTFLIDKLMELFTVSE
LVDFLEANEVQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPVG
ATPEYLAGHYMLQGASSLLPVMALAPQENEKVLDMSAAPGGKTSYMAQLMKNTGVILAND
ANADRLKSVVGNLHRLGITNSVVCNYDGREFPKVMGGFDRVLLDAPCSGTGVISKDPAIK
TSKDEKDILRCAHLQKELILSAIDSLDASSETGGYVVYCTCSVMVEENEWVVDYALKKRN
VKLVQTGLDFGKQGFTRFKERRFHPSLKLTRRFYPHTHNMDGFFVAKFKKFSNAIPKLVK
EGEKDPQEGEVEATEKKHTTDKNTKNSKKPKQTDSKPATAARDQGAKVTKVTKAKGVGNQ
DTKEKKAKSRVTKKRRFEKKSNGRMGKNKFKKFKKLKTV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggaccccacgaacaaggtgaagcgcggcccagggcgcaaatcaagg
aaacagaaaggggccgagacggagatccccaaattcctgcaggacgatgacgaaggaccg
aaaagactttccagtcgagggcgaaaaagggcagggaaacgggttttccagaagaaaaac
aaaatggagactgaacggaaagacttgccagcgtgcaaaacccccactgcaaaccaggac
aaagcggtgcccaagaaaggtttcagtgacaacaacgcagagtggctgagaccggccaag
cgcaagagagcagctggagaagaggaggaggaggagagtgactctgagggagagggggag
tggaagaatgaagagggagagtcttcagaggaggaaatggtggatgattacggagccgaa
gagggggaaggtgaaagtgagaagataggaggaggagagttatggagtgcagaagaggag
tcttctgaggaagaggaggaaggagatgaggattctgagcttttacctatcgagcgagct
gcagagcgacagaagaaacgagcgctgctggagaaagagagaggagagagggaagaagag
agcgaggaagagaaggtggaagaggaagacgatcttcaactcaacatcgaggagcttgag
aagttcaccctgcccagcggacaggagattgagaaggagagcgtccagccccccgacctg
caagtggtgcaccagcgaatcaaagacaatgtggaggtgctcggggacttcagcaagaag
agggaggaggggagagagagggaggactacctgaggctgctgaagcacgacctggccatg
tactacagctacaacaccttcctcatcgacaagctcatggagctcttcacagtgtctgag
ctggtggatttcctggaggccaatgaggtgcagcgacctgtgacaattcgaaccaatact
ctgaagacaaggaggcgggacttggctcaggcactcattaaccgcggggtgaatctggac
cccctagggaagtggtccaaggttgggctggtgatcttcgattcctctgtgcctgtcggt
gcgaccccggagtacctggctggtcactacatgctgcagggcgcctccagcttgctccct
gtcatggcccttgcgccacaggagaacgagaaggtgctggacatgagtgccgctcccggg
ggcaagaccagctacatggcccagctgatgaagaacactggggtgatcctggctaacgat
gccaacgcagaccggctgaagagtgtggtgggaaacttgcaccgactgggtatcacaaac
agcgtggtgtgcaactacgacgggagagagttccccaaggtgatgggaggtttcgatcga
gttcttttggacgctccttgcagtggaacgggagtcatttcaaaggacccggccatcaaa
actagtaaggatgagaaggatatcctccgctgtgctcacttacagaaggagctgatcctc
tccgccatcgactccctggatgcttcctcagagacggggggctatgtggtgtactgtacc
tgctctgtcatggtggaggagaacgagtgggtcgtggattacgctctgaagaaacgaaat
gtgaagctggtccaaaccggtctagattttggaaagcagggtttcaccaggtttaaggag
cgtcgtttccacccctctctgaagctgactcgaaggttctatcctcacactcacaacatg
gacggcttcttcgtggccaaattcaagaagttttcaaacgccattcccaaactcgtcaag
gaaggagagaaggatcctcaggagggggaagtggaggccacagagaaaaaacacacaact
gacaaaaacacaaagaactcaaaaaaacccaaacagaccgattccaaacccgccactgca
gccagagatcagggtgcaaaggtcaccaaggtcaccaaagccaagggggtaggaaaccaa
gacacgaaagagaaaaaagcaaagagcagagtgacgaagaagaggaggtttgagaagaag
agcaacggcaggatgggaaagaacaagttcaagaaattcaagaagctgaagaccgtgtga
DBGET
integrated database retrieval system
