Polyodon spathula (Mississippi paddlefish): 121325570
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Entry
121325570 CDS
T07273
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121325570
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Gene cluster
GFIT
Motif
Pfam:
AXH
Kisspeptin
Motif
Other DBs
NCBI-GeneID:
121325570
NCBI-ProteinID:
XP_041124198
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Position
13:complement(37235374..37242583)
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AA seq
791 aa
AA seq
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MKPAHERNQESLPPKKRDLPLNSSGGGDESTSTRSSGSTGSDAPGTAMAGEWMRVQTGLP
YSVESSESMAVPIDQYGMLYKVALPSGTYSPNSLHQVLNMGHLSPAYSMPSPLLQHPGIP
YPPMGYAQIPHSSLQFVGAPYAVPYAVPPGFVPSSLISPQAAIPQQHHVSHLVPYPSVIQ
EEVIAPPPQPQSSAHAFTKVATAAGLSVVLASDHATQQQHIGAVAGLSATEISPRGVPVY
YHHASSRAPPTAVTAPVYRDVLSHHDQGLVAASQHERGKVVNGSEEDQGGRELLQELLYS
GRNMQVLHVVASTAGAEGFVDGQHTTQQQTPLEERPSPSHRSTPDTDLEVQQVVGRLASP
NQNILANRKEASSGPLNLSQGSHRSREILPAAQGRGAVREETLLPGWTAFGGHAGVQGDP
RIQQQQQPHHQSSPQHHAVILANGQPVLVPLEQNQQLQQQQLPRLLNNITTTTTTAVAVP
KASEPLTRTCTPERVVAAVDVAAQQQRQPVSDQAPVTPPPSHFMKGAIIQLANGELKRVE
DLQTQDFVRSAEMSGGLKIDSSMVVDIRKSQQRPGLMALQFTVGEQQNKVAIDVPPEHPF
FVFGQGWSSCSPDRTVQLYGLSCHRLQAGDVCISLTLQQQAQTRTPTITANVNNAGVSQP
MGPPASQQLRAPSQFRADRTHREREDEEEAMQSGGAGSGETALQTVRTFANQPRGQTNYY
LHTESHSQAGGEQLHTTIAAQRRWSAPGFQRYGTRSEESAQPSSSSSGSSRPSFIPQEVK
LSIEGRSNAGK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgcccacgaacgcaaccaggagagcctccccccaaagaagcgggacttgcca
ctgaacagcagcggaggtggggacgagtcgacgtccactcgcagttcgggctcgactggg
agcgatgcccctggcactgccatggctggggaatggatgcgagtccagacaggactgccg
tacagcgtggagagctctgaaagtatggctgtgcccatagaccagtacggcatgctttac
aaagtcgccctcccctcaggcacctactctccaaacagcctgcaccaggtcttgaacatg
ggccacctttctcctgcctacagcatgccctctccccttctgcagcacccaggaatcccc
tatcccccaatgggctatgcccagattccccattcctccctgcagtttgtaggcgctccc
tatgctgtcccgtacgctgtgcctcctggctttgttcccagctccttaatctcgccccag
gctgctatcccccaacagcatcatgtttcccatctggttccctacccttcagttatccag
gaggaagtcattgcccctcccccacagcctcagtcctcagcccatgctttcactaaagtg
gccacagcagcaggcctttccgtggtcctagcctctgatcatgccacacagcagcagcac
attggagcagttgcagggctctctgcgactgaaatcagtcccagaggagtgccagtctat
taccaccacgccagttctagggctccccctactgctgtgacagctcctgtttacagagat
gttttgagccatcatgatcaggggttggtggctgcttcccagcatgagagggggaaagtg
gtgaacggaagtgaggaggaccaagggggcagagagctgctgcaggaattgctgtactcc
ggcaggaacatgcaagtcctccacgtagtggccagcacagccggggcagagggctttgtg
gatgggcagcacaccactcaacagcaaacccccctagaggagaggccatcccccagccac
aggagcacccccgacactgacctggaggtgcagcaagtggtggggcgcctggcttctcca
aatcagaacatcctggcaaatcgtaaagaagcctcctccggccccctgaacctatcacag
ggctctcatcggagcagagagatcctgcctgcagcccagggtcgaggtgctgtcagagag
gagactctgttgccaggctggactgcattcggtgggcatgctggagttcagggcgaccca
agaatacaacagcagcagcaaccacaccaccagtcctcgccacagcaccacgctgtgatc
ctggcgaatgggcagcctgtattggtgcctctggagcagaaccagcaactccagcagcag
caacttcccaggttactaaacaacataacaaccacaaccaccacagcagtggcagtccca
aaggcctccgaacctctgactcgaacatgcaccccagagagggtggtggcagcagtggat
gttgcagcccagcagcagagacagccagtatcggaccaggcgcctgtcacccctccccct
tcccacttcatgaagggagccatcatccagttagccaacggggagctgaagcgagtggag
gacctacagacccaagactttgtgcgcagtgccgagatgagtggcggtctcaagattgac
tccagcatggtggtggacatccgcaagagccagcagcggcctggtttgatggccctccag
ttcacagtcggggagcagcagaacaaagtggccattgatgtcccccctgagcaccctttc
tttgttttcggccagggctggtcatcctgtagtcctgaccggacggtccaactgtatggg
ctgtcttgccaccgattacaagcaggggatgtgtgtatctcgctcaccttgcagcagcaa
gcacaaacaaggacacccacaattactgctaatgtcaataatgctggtgtctcccagccc
atgggacccccagcctcccagcaattgagggcccccagccagttcagagctgacaggact
cacagggagcgagaggatgaagaggaagcaatgcagtcggggggagcgggatcaggggag
acagcactccagactgttaggacatttgcgaaccagcccagaggccagaccaattattat
ttgcacacagagagccattcccaggcaggaggggagcagttgcacacaacaattgcggct
cagcggcgttggtcggcgcccggtttccaaagatacgggaccaggagcgaggaatcagcc
cagccttcctcctcatcctctggctcctccaggccttccttcatccctcaggaggtcaaa
ttgtccatcgagggacgctccaacgcggggaagtag
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