Polyodon spathula (Mississippi paddlefish): 121325607
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Entry
121325607 CDS
T07273
Symbol
pex5
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisomal biogenesis factor 5
KO
K13342
peroxin-5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121325607 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325607 (pex5)
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121325607 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_16
TPR_17
TPR_11
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
ANAPC3
TPR_20
TPR_Slam
TPR_9
TPR_10
DUF1641
Motif
Other DBs
NCBI-GeneID:
121325607
NCBI-ProteinID:
XP_041124349
LinkDB
All DBs
Position
13:25520341..25597409
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AA seq
616 aa
AA seq
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MAMRELVEGECGGANALMKLTTHMTQDRTLRPEGVSAWEHRGGGATASVPKPVAVCTEDE
LVSESSTRVGVSALSRAPPTFKMDDLLAEMQEIEQASYRHAPQRAPGVAALALSGDWTQE
FLTTESSAANQQLPHEPAESDWTREFIADTAETQSLGFARPGSGGEYLEQSEEKLWLGDF
ERQEKEWTEEYRPPDDLRDTANQLLAKVDDPKLQNTESSVESWVDEFTKAPALVSDTDFE
KARAAVESDVDFWDKLQVEWEEMAKRDAESHPWLSEFDEIVTSSYDKGYQFESENPLLEH
PEPFEEGLRRLHRGDIPNAVLLFESAVQRDPQHMEAWQYLGTSQAENEQELAAISALRRC
LQLQPDNLVCLMALAVSFTNESLHKQACETLRDWLRHNPRYGSLVRERESGSACASGAHR
RAFGSLLPDSLFSEVQSLFLAAVSLDPSHIDPDVQCGLGVLFNLSSEFDKAIDCFNTALS
ARPEDYLLWNKLGATLANGSRSEEAVEAYRRALELQPGFIRSRYNLGISCVNLGAHREAV
EHFLEALRLQRSASGEGLAREGGRTSAQGGGATSDNIWSTLRMALSMMGESSLYSAADQR
DLDTLLREFGLEREGE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgagagctggtggagggggagtgtgggggggccaacgccctgatgaagctg
acaactcacatgacccaggacagaacgctgcggccggagggggtgtcggcctgggagcac
cgggggggcggagccacagccagcgtccccaagccagtcgctgtgtgcacagaggatgag
ctggtcagcgagagttccaccagggtgggagtctccgccctctccagagcgccacccact
ttcaagatggacgacctgctggcagagatgcaagagatcgagcaggccagctatagacac
gccccccagagagcccctggagtggcagcgctcgccctgtcaggtgactggactcaggag
ttcctcaccactgaatcctctgcagccaatcagcagcttcctcatgaaccggctgaatct
gattggaccagagagttcatcgctgacactgccgagacacaaagtctggggttcgcgagg
ccaggttcaggtggggagtatttggagcagtcggaggaaaagctgtggctcggagacttt
gaaagacaagagaaagagtggacagaggagtaccgacccccagatgacctcagagacacg
gccaatcagctgctggcaaaggtggacgaccccaaactgcagaacacagagtcgtcggtg
gagtcctgggttgatgagttcaccaaggccccagccctcgtctcagacacagactttgag
aaggcccgcgctgcagtggagtcggacgtggatttctgggataagctgcaggtagagtgg
gaggagatggcaaagagagacgcagagtcacacccctggctctcggagttcgacgagatt
gtcacatcgtcatatgacaaggggtaccagttcgagagtgagaacccgctgcttgagcat
cccgagccctttgaggaggggctgcgccggctccacaggggggacatccccaacgcagta
ctgctgttcgagagcgcagtccagagggacccccagcacatggaggcgtggcagtatctc
ggaacctctcaggctgagaatgagcaggagttggctgctatcagtgccctccgcaggtgc
ctgcagctccagcctgataacctggtgtgcctcatggctctggctgtgagcttcaccaat
gagtctctgcacaagcaggcctgcgagacgctgcgggactggctgagacacaacccacgc
tatggtagcctagtgagggagcgcgagagtgggagtgcgtgcgcgagcggggcgcacaga
agagcattcgggtccctgctgccagactctctcttctcagaagtccagtctctcttcctc
gccgcggtcagtttggacccatctcatattgatccggatgtgcagtgtgggttgggggtt
ctgttcaatcttagcagcgagtttgacaaggccatcgactgcttcaacactgcactgagc
gccagaccagaggactatctcctctggaataagctgggtgccactcttgctaacggcagt
cgctcggaggaggcggtggaggcctacaggcgagcgctggaactgcagccaggcttcatc
cgctcccgatacaacctgggcatcagctgtgtgaacctaggggcgcacagggaagctgtc
gagcacttcttggaagcactgcgcctccaacgttctgccagtggggaggggcttgccagg
gaggggggcaggacctctgcacaggggggaggggccacctcagacaacatctggagcaca
ctcagaatggccctgtccatgatgggggagagcagcctgtacagtgccgcagatcagcga
gacctggacaccctgctgagagagttcggcctggagagggagggggaatga
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