Polyodon spathula (Mississippi paddlefish): 121325617
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Entry
121325617 CDS
T07273
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04371
Apelin signaling pathway
pspa04514
Cell adhesion molecules
pspa04520
Adherens junction
pspa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121325617
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121325617
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121325617
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121325617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121325617
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121325617
04090 CD molecules [BR:
pspa04090
]
121325617
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121325617
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121325617
CD molecules [BR:
pspa04090
]
Proteins
121325617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
TM_ErbB1
Cadherin_4
AMPK1_CBM
Motif
Other DBs
NCBI-GeneID:
121325617
NCBI-ProteinID:
XP_041124365
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All DBs
Position
13:complement(37747970..37764524)
Genome browser
AA seq
888 aa
AA seq
DB search
MGSNRSFGVILILVQIWIGGFCEESAKCQPGFSSNHFVFKLNKGELERGRVLGKVNFDDC
TGRKVVLYNSNDSRFDVGTDGTIKLKRRVKLHHGHKSFSVHAWVTKGKRSYTRVTVENET
RRRHSHHRDHDHHGKHNSSTNVQSSSQHQVLTFPQSSTGLRRQKRDWVIPPISVSENERG
QFPKFVVKIRSNKDKEITVYYHITGPGADEPPEGLFTITKTGGELYVTQPLDRESQAQYI
LMAHSVDINNKPVEDPMEIIIRVTDQNDNVPEFTMNTFLGNISEGSPQGAVVMKVTATDK
DDPTMDNGIIGYSILNQEPKEPHFPMFSINKAGTISVIAAGLDREKVPEYKLIIQAADMD
GTGLSTTATAIITVTDQNDHAPQFKTAQETVWVPENEVGVLVTRLAVTDLDVPHTPAWNA
KYTIVKGNDGNAFNITTEPGSNEGILKTAKGLDYETIRQYTLFVTVENEEPFTSTLPTAT
ATVTVNVEDVNEAPIFNPLVKRIVVEENMPIGSSIAVYTATDPDKEMKQTVTYRIGNDPA
GWMEISNNTGVIKVKQLMDRESPFVKNNTYTAMFLALDNANPPATGTGTLVVELTDVNDN
GPEIVEREIRVCNKETVPQILNVVDKDTSVYAGPFNVQVLQDEEKNWTATMNDKGEHIIL
TMAKELKQNDYLVILRVFDTDNKYQDSRIKAIVCDCKGGDFACKGEISDAGLPAILGIMG
AILTLLILLLVLLLLLRRRKAIKKEPLLPEDDIRDNVLSYDEEGGGEEDQEYDLSQLHRG
LDARPEVFRNDVVPTTMAVPQYQYRPRPANPDDIGNFIDDNLKAADNDPTAPPYDSLLVF
DYEGGGSEAGSVSSLNSSSSGDDQDYDCLNEWGPRFKKLADMYGGGED
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaataggagttttggagtaatacttatcctagtccagatttggattggagga
ttttgtgaagaaagtgcaaaatgtcagcctggattcagttcaaaccattttgtcttcaaa
ctcaacaaaggagagctagagagaggcagagtgcttggtaaagtgaattttgatgactgt
actggacgcaaggtagtcctttacaactcgaacgattcccggtttgatgtgggtactgat
ggaactatcaaactaaagagaagggtgaaactgcatcatgggcacaagagcttttcagtc
catgcctgggttactaaaggcaagcgatcctacaccagagtcacagtggaaaatgaaacg
agaagacgccactcccaccatagagaccatgaccaccatggaaagcataactcatctaca
aatgttcagagcagtagccagcaccaggtcctgacatttccacaatcttctactggcttg
aggagacaaaagagagactgggtgattccacctatcagtgtttctgagaatgaacggggc
caattccccaaatttgtggttaagataaggtccaacaaagacaaggaaattacagtttac
taccacataacagggccgggagcagatgaacccccagaagggcttttcacaattacaaag
actggtggggaactgtatgtgacccagcccttggatcgtgagtctcaagctcaatatatt
cttatggcacattctgttgacattaataataaaccagttgaagatcctatggagatcata
attagagtcactgatcaaaatgataacgtaccagagttcacgatgaacacctttcttggc
aatataagcgagggctcaccacaaggagctgtagttatgaaggtgacggctacagataaa
gatgaccccacgatggacaatggtataattgggtattccattctaaaccaagaacctaaa
gaaccccacttccccatgttttccattaacaaggcaggaaccattagtgtgattgcagct
gggctggatagagagaaagtacctgaatataaattgatcatccaggctgcagatatggat
ggtactggtctctcaaccactgccacagctatcattaccgtaacggatcagaatgaccat
gctccacagtttaaaactgcacaggaaactgtttgggtaccagaaaatgaagtgggcgta
ttggtgacgagattagctgtgacagatctggatgtgccccatacaccagcctggaatgcc
aaatatacaattgtcaaagggaatgatggaaatgctttcaatatcaccacagaacccggc
agcaatgaaggaattctcaaaactgccaagggccttgattatgagacaataaggcaatac
acgttgtttgtgacggtagaaaatgaagagccatttaccagtactctaccaacagccaca
gctaccgttacagttaatgtagaagatgtcaatgaggctcccatttttaatccactggta
aagagaattgtagttgaagagaacatgcctattggaagttctatagcagtatacactgca
acagatccagacaaagagatgaagcagactgtaacatatcgtatagggaatgatcctgca
ggatggatggaaatcagtaataatactggagtgatcaaagttaagcaactcatggataga
gagtctccatttgttaaaaacaatacatacactgcaatgtttctggcattggacaatgct
aacccaccagccacaggtacaggaactcttgtggtggaattgacagatgtgaacgacaat
ggtcctgaaatagttgaaagagaaataagagtttgtaacaaggaaacggtcccccaaata
ctgaatgttgtagacaaagacacttcggtctatgctggtccttttaatgtacaagtcctg
caggatgaggagaagaactggactgccaccatgaatgataaaggagaacacattattctc
acaatggccaaggagctaaagcaaaatgattatcttgttatactgagagtgtttgatact
gacaacaaataccaagatagtagaattaaggcaatagtgtgtgattgcaaggggggtgat
tttgcctgcaaaggtgaaataagtgacgctggcttgcctgcaattctggggataatggga
gccatacttacactgctgattctcttgctagtactgttgctcctgctcagaagaagaaag
gccattaaaaaggaacctctgcttccagaggatgacatccgtgacaatgtcttatcttac
gatgaagaggggggtggagaggaagatcaggaatatgacttgagccagctgcacagaggt
ctggatgcccgacctgaggtcttccgaaatgatgtggtgccaactactatggctgtgcca
cagtaccagtaccgtccccgaccagctaacccagatgatatcggcaacttcattgatgac
aacctgaaggctgctgacaatgaccccactgctcctccttatgactctctgctggtgttt
gattatgaaggtggcggctcagaggctggttctgtcagttcactgaactcctccagctct
ggggatgaccaggactatgactgcctcaatgagtggggcccccgcttcaagaaacttgct
gatatgtacggtggtggagaagactga
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