Polyodon spathula (Mississippi paddlefish): 121325628
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Entry
121325628 CDS
T07273
Name
(RefSeq) beta-2-syntrophin-like
KO
K24064
beta-syntrophin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121325628
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Gene cluster
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121325628
NCBI-ProteinID:
XP_041124377
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Position
13:complement(34232127..34292465)
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AA seq
606 aa
AA seq
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MAVWTRADKNGLLELLLRDRWIRVLAELTRETLTLTADAEPGHAGDMEYNISHPPGAWNG
VTNGTEPGTAAGNSNRSYNQHLNHSALRRTGSPGSGGSNRGQTDTSSGLNSPGSGRVPHD
NGTVSDFGSPGSSYGSPGSSFSSAGPVRSGETNIALESGSSEMVRKVRVLKQESGGLGIS
IKGGQENRMPILISKIFPGLAADHSRALRVGDAILSVNGNDLREATHVLSVNGNDLREAT
HDQAVQALKKAGKEVTLEVKYIKEVSPLFKKPSLVADLPWDGVRPQSPSLSGSEDSGSPK
HRGTRDKKVISLKMCYISRNLTIPDLESRLIELHSPDGRNTVVLRCKDSAAAHSWFTAIH
TNIAALLPHVLAELNSMLGSSNASSNREVRHVGWLAEQIKLDGGRHQYRPVVMALTEKDI
LLYDSMPWTREAWASPSLSHPLLATRLVHSGSARSSPALGSELAFATRTGTRQGIEGHLF
RTETHWDLSTWTRMMVQGCHSAVELIKEVSMACTLNEQDVRLTVHYENGFTIAKEGAGPG
SGSTVLYRYPFEKLKMSGDDGIRNLYLDFGGPEGEMALDLQSCPKPVVFVVHSFLSAKVT
RMGLLV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttggacacgggctgataagaatggacttctggaacttttgctccgggaccgc
tggattcgagtattggcagaactcacccgggaaacactcaccctcacagctgatgctgaa
ccagggcatgcaggtgatatggaatataatattagccatccgccaggggcgtggaatggg
gtgacaaacggaaccgaaccagggaccgcagcaggcaactcaaaccgatcctacaaccag
catctgaatcacagtgcgcttaggcgaactgggagccctggcagtggtgggtcaaaccga
ggtcaaactgataccagctccgggctcaacagccctggttcgggtcgggtaccccatgac
aacgggacggtttctgacttcggtagccctggctccagttatggtagccctggctctagt
tttagtagcgcaggaccggtgaggtctggggaaactaatattgctttagaaagcggtagt
tctgagatggtaagaaaagttcgagtattgaaacaggagtctggtgggcttggtatcagt
atcaaaggaggacaggagaaccgtatgcctatcctgatttccaagattttcccaggactc
gccgcggaccacagtcgggctcttcgggtcggtgatgccattctatctgtcaacggcaac
gacctccgtgaagcaactcacgttctatctgtcaacggcaacgacctccgtgaagcaact
cacgatcaggcggtccaggcactgaaaaaggccggtaaagaggttacactcgaagttaaa
tacattaaagaagtcagccctctgtttaagaagccctctttggtggcggacctgccctgg
gatggcgtgcgccctcagtcccccagcctgagtggcagcgaggactcggggtccccaaaa
cacaggggcaccagggacaagaaggtgatctccctgaagatgtgttacatcagccgcaac
ctcaccataccagaccttgagagcaggctgattgagctgcactctcctgacggcaggaac
acggtggtcctgaggtgtaaagactcagccgcagcacactcctggttcacagcgatccac
accaacatcgcagcgctgctcccacacgtcctggctgagctcaactccatgctgggctcc
agcaacgccagcagcaacagggaggtccggcacgtcgggtggcttgctgaacagataaag
ctggatggaggccgccaccagtacaggcctgttgtcatggccctgacggagaaggatata
ctgctgtacgacagcatgccctggacaagagaggcctgggcatcgccaagcctgagtcac
ccgctacttgctacacgactggttcactctggttctgcgcgaagctcgccagcacttggc
tcagaactcgccttcgccaccaggacgggcaccaggcagggcatcgaggggcacctcttc
cgcaccgagacccactgggacctgtccacctggactagaatgatggtccagggctgccac
agtgctgtagagctcatcaaggaggtctcaatggcttgcacactgaatgaacaggatgtc
cggttgacagttcattatgagaatggattcacaatcgcaaaggaaggggctggacctggc
agcggcagcactgtcctctaccgctacccctttgaaaagttaaagatgtcaggagatgat
gggatcagaaatctttacctggactttgggggccctgaaggagaaatggctctggatctt
caatcttgtccaaaaccagttgtctttgttgtacattcttttctttctgccaaagtcaca
aggatgggactgctggtttga
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