KEGG   Polyodon spathula (Mississippi paddlefish): 121325668
Entry
121325668         CDS       T07273                                 
Name
(RefSeq) protein bicaudal C homolog 1-like isoform X1
  KO
K18756  protein bicaudal C
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121325668
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121325668
SSDB
Motif
Pfam: KH_BICC1 KH_1 KH_BICC1_1st SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 KH_N4BP1_1st SpoIIIAH
Other DBs
NCBI-GeneID: 121325668
NCBI-ProteinID: XP_041124448
LinkDB
Position
13:14311606..14405597
AA seq 969 aa
MAAQCESLSGYLQQSDPGSNSERSTDSPVPVSEDDSSGPHAPPDPEWTEERFRVDRKKLE
VMLLAATEGKVNSGEDFFQKIMEETKTQIAWPSKLKIGAKSKKDPHIKVSGKKDNVKEAK
EKIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPAGVEAARAKIRELLPLVLMFELPAIIQPNPDPNSPAVQHISQTYNISVSF
KQRSRMYGATGIVRGSQNNTTAVKRGTALLLDHLAGSMANAISVSTQLDIAPQHHLFMMG
RNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIDSVCLARQYLMGCLPLVLMFDIK
EGIEVEPPCITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLESSG
VTIQSSSSSTVICPVGLDILASAGLGLTSLGLLGPTSSSLNNCTAANSLLNALNSSVSPL
QHSSSGRPSPTLWATSLASPTSAPGFSSPLMMHPSTQATLTNIFLSGVQGYAQNTPSPPP
GLAPIDSQVNGLSETSKNLSSLNGHVKHSNSVYRRLSGACLADKVLGGNHTDSSNESSGH
SPTEQLTGKSSPDEVSNDAFVEVGMPRSPSHSANSNELKQMLGSSKSSAGKRQAVELLQG
TKNSHLHTSDHLLSDSDSSASESPLADKKAPGSERAAERAAQQNSERIRLAPPSFANMQV
LTAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHVPYKP
TMSTTYEVSPLSLSRSDNQEGLGSGSDSDNWRERNGNGTLAHSEFPSAIGSPKRKQNKST
EHYLSCSNYMDCISSMTGGNGCNLNGSFKGSDLPELFSKLGLGKYTDVFQQQEIDLQTFL
TLTDQDFKELGITTFGARRKMLLAISELNKNRRKLFEPPSIRSSFLDGGVSGRLPRQFPS
DIASVSGRW
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggctgctcagtgcgagtctttgagcggatacttgcaacaatcggacccgggctcgaac
agcgagcgcagcacagactctcctgtccccgtctctgaagatgattcaagcgggccccat
gccccaccagatccggaatggaccgaggagaggtttcgtgtggatcgcaagaaactggaa
gtcatgttactagctgccacagaggggaaggtcaacagtggagaggatttctttcagaag
attatggaagaaactaaaacccagattgcgtggccttctaaactgaagataggtgccaag
tctaagaaagatccgcatatcaaagtctctggaaagaaggacaatgtgaaggaagcaaaa
gaaaagataatgtccgttcttgacaccaaaagtaaccgggtcacgctgaaaatggatgtg
tctcatacagaacattcccatgtgatcggcaaagggggcaacaacatcaagaaagtaatg
gaggaaactgggtgccatatacatttcccagactccaacaggaataaccaggcagagaaa
agcaaccaagtatcaattgcaggacagcccgctggtgtggaggcagccagagccaaaatc
agggaacttcttcccttggtactgatgtttgaactgcctgcgattatccagcccaacccg
gaccccaactccccagcagtgcagcacatatcccagacctataacatttcagtgtccttc
aagcagcgctccagaatgtatggtgctactggcattgtcagggggtcccagaacaacacc
acggctgtcaagagagggactgctttgctgttggatcacctggctggcagcatggccaat
gccatctctgtgagcacccagctcgatatagcaccgcaacatcatctcttcatgatgggc
cgcaatggcagcaatatcaaacacatcatgcagagaacaggcgcccagatccacttcccc
gaccccagcaacccacagaagaaatccaccgtctacctccagggaaccatcgactctgtc
tgcttggccaggcagtatctcatgggttgccttcctcttgtgttgatgtttgatatcaaa
gaaggcattgaagtggaaccaccctgtattacccagctgatggagcagttagatgtcttc
atcagcatcaaaccaaagcccaaacagccaagcaagtctgtgattgtaaagagtgtggaa
aggaatgccttaaacatgtatgaagcgaggaagtgcctcctgggcctagaaagcagtggg
gtaacgatacaatcaagcagctcttccactgtcatctgccctgtgggcctggatattctg
gcttcagccggactcggtctcaccagcctaggcctcttgggccccacgtcgtcatcgtta
aataactgtactgctgccaactcgctcctgaatgccctcaacagttcagtcagtcccctg
cagcactccagctcaggcaggcccagccccacactttgggcaacctcacttgctagcccg
acaagtgccccaggcttctcttcacccctcatgatgcacccatcaacacaggccaccctg
accaatattttcctgtcaggtgtccagggttatgcacagaacacaccctctcctcccccc
ggactggccccaattgacagccaggtcaacggcttatcagaaaccagcaagaatctgtca
tctctcaatggacatgtcaagcattccaattcggtatacagaaggttgtccggggcttgc
ctagctgataaagtccttggtgggaatcacacagactcttcaaatgagagcagtggccac
agtcccacagagcaactaactggcaaatccagccctgacgaagtttcgaatgatgccttt
gtagaagtaggcatgccgagaagtccatcgcactccgcaaacagtaatgagctgaaacag
atgctgggttcttcaaaatcgtcagctggcaagaggcaggcagtggagcttctacaaggc
accaagaattcacacctgcatacatcggaccacttgctttcagattcggattccagtgct
tcggaaagcccactggctgataagaaggctccagggagcgagagagctgcagagagggca
gcccagcagaattctgagagaattcgtctggcgccgccctcttttgccaacatgcaggta
ctcactgcatttgactatgaacaaaagaagctgttagcaaccaaagcaatgctgaagaaa
cctgtggtaacagaagtgcgaacgcccacaaacacctggagtgggctgggattctccaag
tcaatgccggcagaaaccatcaaggaactcagaagagctaaccatgtgccctacaagccc
accatgtcaaccacttacgaggtttcccccctgtctctctcgcggtcggacaatcaggag
ggtttggggagcggcagtgattctgataactggagggagaggaacgggaacggcaccttg
gctcactccgaattcccatcagccattggcagccctaaaagaaaacaaaacaaatcaaca
gaacactatctaagctgcagtaactacatggactgcatctcctcaatgactggcggcaac
ggctgcaacctgaacggttctttcaagggatcagatctgcctgagctcttcagcaagctg
gggctggggaaatacacagacgtatttcaacagcaagagattgatctccagacattccta
acgctgacagatcaagatttcaaggagcttggcattactacatttggtgctagaaggaaa
atgctgcttgcaatctcagaactgaacaaaaacagaagaaaacttttcgagcctccaagc
atccgctcttcgttcctggacggcggggtcagcgggcggctgcctcgtcagtttccctca
gacattgccagcgtcagcggcagatggtag

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