Polyodon spathula (Mississippi paddlefish): 121325695
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Entry
121325695 CDS
T07273
Name
(RefSeq) twinkle protein, mitochondrial-like
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121325695
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121325695
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121325695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_16
nSTAND_NTPase5
AAA_29
AAA_19
nSTAND3
T2SSE
ABC_tran
ATPase_2
TsaE
AAA_23
cobW
AAA_SelU
AAA_24
Motif
Other DBs
NCBI-GeneID:
121325695
NCBI-ProteinID:
XP_041124487
LinkDB
All DBs
Position
13:457527..465939
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AA seq
729 aa
AA seq
DB search
MQQTLVFLRRPVMFLQEACCSARRLHHLSHYSTFLWTRCQRSPVCVPTLAPLHYSTILWT
RCQHSPVCVLTPAPLHSLPCSAWLYSTRRSFKKGLKSSLDCSVPPVSVTEIRQYLRSKDI
PFHDGYSCLHTPSLFKERASDSAVTEKESFSLFVDKTTGRFLCKETLVEGSWEDFQDCVE
VMQKERQGSLSPEVLLGYPDSDTELDEKEMDRREIQRIWSSSVPFSDLLEDDAQLVKVMF
GMGKISSTTLKKFGVRFFKPTKSLVLPWFSGRDSSLRGLKLLSAECKGEDQVIYKDVTFP
KPGLYHNLFGLQLIGRKDTEVVLTGREVDTLAVSQATGLPSVALPRGVSCLPPVLLPFLE
QFKRVTLWLGGDLRSWEASKIFARKLGLKRCSLIRPGETQPCPSDALAKGMNLNKILKAS
IPAAHKSIISFRQLREDVFGELANKEQVAGVKWSRFPELNKILKGHRKGELTVLTGPTGS
GKTTFISESALDLCMQGVNTLWGSFEINNVRLAKIMLTQFSQQRLEESLDQYEEWADQFE
ELPLYFMTFHGQQNIKTVIDTMQHAVYLYDISHVVIDNLQFMMGQENLSVDKFAVQDHII
STFRKFATGSSCHVTLIIHPRKEEDDKELQTASIFGTAKASQEADNVLILQEKKLVSSQG
RRSLQVAKNRFDGDVGIFPLEFNKTSLTFSTPKSKTKLRKVKGDTAEKPVKTLSSAGRTP
SEEGAKKKK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaccctcgtcttcttgcgaaggccagtcatgtttctccaggaggcttgttgc
agtgccaggaggctgcaccacttgagccactactccaccttcctgtggactcggtgccag
cgcagccctgtgtgtgtgcccactctagctccattgcactactccaccatcctgtggact
cggtgccagcacagccctgtgtgtgtgctgactccggctccattgcactccctcccatgc
agtgcctggctctacagcacccggaggagctttaaaaagggcctcaagtcatccctggac
tgctctgtccctccagtgagtgtgactgaaatcaggcagtacctgcgctcgaaggacatc
ccatttcatgatggttacagctgcctgcacacccctagcctcttcaaggagcgagcgagt
gactccgctgtcacagagaaggaaagcttctccctttttgttgacaaaaccacgggccgt
ttcctgtgcaaggagacccttgtggaagggagctgggaggactttcaggactgtgtggag
gtgatgcagaaggagaggcaaggatccctcagtccggaagtcctgttgggctatcctgac
agtgacacggagctggatgagaaggagatggaccgccgggagatccagaggatctggtcc
agctcagtccccttctcagaccttcttgaagatgatgcccagctggtgaaagtcatgttt
ggcatggggaagatctccagcaccaccctgaagaagtttggtgtgaggttcttcaagccc
accaaaagcctggttttgccctggttcagcggccgggattccagcctaagggggttgaag
ctgctgtctgctgagtgcaagggtgaagaccaggtcatctacaaggatgtcacttttccc
aagcctggtctctaccataatctcttcggtcttcagttgattggccgcaaagacactgag
gtggtgctgaccggccgggaggtggataccttggcagtcagccaggccacagggctaccc
agtgtggccctgccccgaggggtgagctgcctccctccggtcctcctacctttcctggag
cagttcaagagggtcacgctctggctgggaggggacctgcgctcctgggaggcctccaag
atctttgccaggaaactgggtttaaagcgctgctccctgatccggcccggggagacccaa
ccttgccccagcgatgccctggccaaggggatgaacctcaacaagatccttaaggcctcc
atccctgctgcccacaagtccatcatctccttccgacagctcagagaggacgtgttcgga
gagctggccaacaaggagcaggtggccggagtgaaatggtcaaggtttcccgaactgaac
aagattctcaaaggccatcggaaaggggagctgactgtactcacaggacccacgggcagc
gggaagacgaccttcatcagcgagagcgctctggacctgtgcatgcagggtgtgaacacg
ctgtgggggagctttgagatcaacaacgtgcggctggccaagatcatgctgacgcagttc
agccagcagaggctggaggagagcctggaccagtacgaggagtgggcagaccagtttgag
gaactgcccctctacttcatgaccttccatgggcagcaaaacatcaagactgtgattgac
accatgcagcatgctgtgtatttgtatgacatcagccatgtggtgattgataacctgcag
ttcatgatgggccaggagaatctgtccgtggataagtttgctgtgcaggatcacatcatc
agcaccttcaggaagtttgccacaggcagcagttgtcacgtgaccctgataatccacccc
aggaaagaggaagatgacaaggagctgcagacagcctccatattcgggactgccaaggcc
agccaagaggcagacaacgtgctgatcctgcaggagaagaagctggtgtccagccagggg
aggaggtccctgcaggtggcaaagaaccgctttgatggagatgtgggcatcttccccttg
gagttcaacaagacctccctgaccttctccacacccaagagcaagaccaaactgcgcaaa
gtcaaaggggacacagcagagaaaccagtgaagacactgtccagtgctgggagaacccct
tcagaggagggggccaagaagaagaagtag
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