Polyodon spathula (Mississippi paddlefish): 121325764
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Entry
121325764 CDS
T07273
Name
(RefSeq) calsyntenin-3-like isoform X1
KO
K22661
calsyntenin 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121325764
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Cadherin related
121325764
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121325764
NCBI-ProteinID:
XP_041124664
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All DBs
Position
13:complement(25657478..25791360)
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AA seq
962 aa
AA seq
DB search
MQAVEVGRMKRQTAGLLLLLLISSALASKANKHKPWIETEYQGIVMENDNTVLLNPPLFA
LDKDAPLHYAGEVCGFRVHSGGSSVPFEAVVLDKSTGEGLIRAKEPLDCEAQREHSFTIQ
AYDCGEGPEGTNSKKSHKATVHVRVNDVNEFAPVFLERLYQVSVSEGRLYDRILRVEAID
ADCSPQFSQICFYEILTPNMPFTIDNDGNIKNSEVLDFRRQRLYRFSVTAYDCGKKRAVQ
DSEVQIEVKPTCKPAWTGWSKRIEYTPGSGSVSLLPSMHLETCDEPVWNIQATIELQTNH
IGKGCDRDSYSDRSVRRLCGAVRGEVDLLPPPSLSTNWTAGLTTVPSPDSSLVFVFNGSV
RQACEVPQSALRELGVSAGDHFTLQLWMKHASGNQPAQQQHGRARKEEESIICNTVRNDD
SFSHYSLSVHSCRLSLLYWPQLTSARPVKFLWKLEQVCDDDWHHYAVNLEFPTVTLYVDG
VTYDPALIHDNGPLRPPAPRPRLVIGASWTEEAQKGSTNGSESEQDLAPPQFQSHFRGLL
AGFTVRPGRVEPHSVIECLYACREGLDFGDLESLGSGMKVHVNPTQSMLILEGDDIENFN
RAIQQITYRNSLRFATPGVRPLRISTSLRCFSEEGCVSIRDVEGYLVVLQPDAPQIFLSG
MAHFALPASEFETPQGVPLFSELRITCSLSHSINTASQGMEGGALMSDAVAHTLDGCEVS
PVGEELDLQREELILDPESVKEKGLELINNTAYIAISGAESISVYEDLLRSLRYRISFGA
ALYERKFRLSCTEMNGRYASNEFSVEVNFLHSVDAGQSHPNHLLSSQQFMPPLRHNLPPE
LTGHNLANAQRNSVVPGAATVIIVVCVGFLALMVVLGIFRIRSIHRQETKEGSSGGKEGE
IDWDDSALTIIVNPMESYELQHGVAAEGKEEKEEKGEEGEESLESLPGDAPDNQRIIIKL
DG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggtggaggtaggcaggatgaagcgacagacagcgggactcctgctgctgtta
ttgattagcagcgcgctcgccagtaaagccaataagcacaagccatggattgagacggag
taccaggggattgtgatggagaatgacaacactgtgctgctgaacccacctctgtttgcc
ctggacaaggacgcacccctgcactacgcaggtgaggtgtgtggattccgggtgcacagt
ggggggagcagcgtccccttcgaggctgtggtgctggacaagtcgacaggggagggtctg
atccgcgcaaaggagccgctggactgcgaggcccagagggagcacagcttcaccatccag
gcatacgactgtggagaggggccagaggggaccaacagcaagaaatcacacaaggccaca
gtgcacgtgcgagtgaatgacgtaaacgagtttgccccggtgtttctggagcgcctgtac
caggtgtcggtgagcgagggccggctttacgacaggatcctcagagtggaggccatcgat
gcagactgctctccgcagttcagccagatctgcttctacgagatcctcactcccaacatg
cccttcaccatcgacaacgacggtaacattaagaactctgaggttcttgatttccgcagg
cagcggttgtatcgcttctccgtcacggcgtacgactgcggcaaaaagcgtgcggtgcaa
gacagcgaggtgcagatcgaggtgaaaccgacctgcaaaccagcctggacaggctggtcg
aagcggatcgagtatacccctggctctggcagtgtctccctgcttcccagcatgcacctg
gagacctgcgatgaaccggtttggaacatccaggccactatagagctgcagaccaaccac
atcggcaagggctgcgaccgggacagctactctgaccgctctgtgagacggctctgcggt
gcagtgcgcggggaggtggacctgctcccgcccccttccctctctaccaattggactgca
gggctaaccacggtgccctccccagattcgtcgctggtgtttgtgttcaatggctcggtg
cggcaggcgtgcgaagtgccccagtccgcgttgcgtgagcttggcgtgtcagctggagac
cacttcactctgcagctatggatgaaacatgccagcggcaaccagccggcacagcagcaa
cacggccgggccagaaaagaggaggagagcatcatctgtaacaccgtcaggaatgatgac
tcgttctctcactactctctctcggtgcacagctgtcgtctgtccctcttgtactggccg
cagcttaccagcgctagacctgtcaagttcctctggaagctggaacaggtgtgtgatgat
gactggcaccactacgctgtgaatctggagttccccacagtcacgctctacgtggacgga
gtgacctatgaccccgctctcatccatgacaatggccccctgcgtccccctgccccccgc
ccccgcctagtcatcggagccagctggacagaagaagctcagaagggaagcactaacggt
agtgagtctgagcaagacctcgccccccctcagttccagtctcattttcggggtctgctg
gcggggttcactgtgcggccgggtcgtgtggagccccacagtgtcatagagtgtctgtat
gcctgccgagaggggctggacttcggggacctcgagtcgctggggtcgggcatgaaggtc
catgttaatcctacacagtccatgctaattcttgagggcgatgacattgagaatttcaat
cgggcgattcagcagatcacatatcggaactctctgagattcgcaacccctggggtccgt
ccactgaggatatccacatcactcaggtgtttcagtgaggagggctgtgtctcaattcgt
gatgttgaggggtacctggtggtcctgcagccggacgcacctcagatttttctctctggg
atggctcacttcgcattgcccgcctctgaattcgagaccccccagggggtgcccctcttc
tctgagttgaggatcacctgctccctgtcccactccatcaacacagctagccagggtatg
gagggcggagctctcatgtcagatgcagtggcgcacacgctcgatggctgtgaggtgtct
ccggtgggggaggagctagacctacagagggaggagcttattctcgaccctgagtccgtg
aaggagaaaggactggaactgatcaataacacggcttacatcgcaatatcaggtgccgag
tcgatctcagtatacgaggatcttttgcgttcgctgcgttatcggatctctttcggtgcc
gctctgtatgagaggaagttccggctgtcctgcacggaaatgaacggacgctacgccagc
aacgagttctcagtggaggtgaatttcctgcacagtgttgacgctggtcagtcgcacccc
aatcacctgctgtcctctcagcagtttatgccccccttgagacacaacctgccccctgaa
ctcacgggacacaacctggccaacgcacaacgtaactcagttgttcctggtgctgcaacc
gtcatcatcgttgtgtgtgtaggcttcttggctctcatggttgttttgggaatattccgg
attcgctctattcaccgccaagaaacaaaggaaggaagcagtggagggaaggagggtgag
atagactgggacgactcggctctcaccatcattgtcaacccaatggagtcctacgagtta
cagcacggagtcgccgctgagggcaaggaagagaaggaggagaagggagaagagggggag
gagtctctggaatcactgcccggcgacgcccccgacaaccaacgaatcatcatcaagctt
gacggctga
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