Polyodon spathula (Mississippi paddlefish): 121325766
Help
Entry
121325766 CDS
T07273
Symbol
wdr11
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325766 (wdr11)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121325766 (wdr11)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Others
121325766 (wdr11)
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Other cilium assembly proteins
121325766 (wdr11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_RIG_1st
TPR_GEMI5
Beta-prop_IFT140_1st
RAB3GAP2_N
NDNF_N
Motif
Other DBs
NCBI-GeneID:
121325766
NCBI-ProteinID:
XP_041124682
LinkDB
All DBs
Position
13:21384571..21485289
Genome browser
AA seq
1225 aa
AA seq
DB search
MIPFTVNIKLSPRTLTGALNIQNKTAVDWGWQGLIAQGCHSVVLVIDPVTAQTIQALERH
KANVVKVKWARENYHHDTGSPYSLRLASADVSGKIIVWDVMAGTARCEIQEYSKPIQDME
WMWNQDASRDLLLAVHPPNYIVLWNADTGTKLWKKSYAENILSFSFDPFDPSNLALLTSE
GIVFISDFSHSKAPGSTGKKVYISSPFSSPVHSKPTPTTGAKKALNKVKVLITNEKPSAE
SVTLNDCLQLSYLPSKRNHMLLLYPREILILDLEVSQTVGVVAIERTGIPFIQVIPCRQR
DTLFCLHENGCITLRVRRSNCSAVKEPDPDQSVQELAYDLRCQCDAMRVTKTVRPYRMVC
SPVSENSAALIISDGRVMMWELKAYATRSDIQYRNSSGVSPLYSPVSFCGVPLRLHQRRI
PDLSLDSMIGQSMIAGEEPPKAPLQQEVQLKFLLTGLLSGLPLPPFVIRMCPPLTTKNIN
QYQPLLAVGTSNGSVLVYHLTSGLLHKELSIHSCEVKGIEWANLTSFLSFATSTPNNQGL
VRNELQLVNLPTGRSLAFRGELGNDETPIEMIKVSHLKQYLVVVFKDKPLELWDIRTCTL
LREMAKNFPVVTALEWSPSHNLKSMKKKQLAAREAIARQTVSDTEVCSVESSVISLVQEA
ESRSGLSQSISAREHFVFTDMDGQVYHLTVEGNSVKDGARIPPDGSMGSIACIAWKGDTL
VLGDVDGNLNFWDLKARLSRGIPTHRGWVKKIRFAPGKGNQKLLVMFNDGAEVWDTKEVQ
MVSSLRSGRNVNYKVLDVDWCTSDKVVLASDDGCIRVLEMAMKSASYRVDEQELTDPVWC
PYLLLPRASLALKAFLIHQPWNGSYTLDVAQINYTEKEDIKSLIQEQLNSLSNDIKSIFL
DPEFSLLQRSLLVSRLYGDESDLQFWMVAAHYLHKFSQGEQLSEPAAAGAAAAQEKPENH
LDICYDTLCENAYFQKFQLERVHLQEVKRSNYDHTKKCADQLLLLGQTDRAVQLLLETNA
ENTSYYCDSLKACLVTTITSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADACRY
LQTYGEWNRAAWLAKVRLNSTECSEVLKRWVDHLCSPQINQKSKAILVLLSLGCFLKVVE
ILHSMRYFDRTALFVEVCLKHGVIEVNDNTNKLISSVFADYARTLKALGLKQGAVLFASK
AGAGGTDLLNELTEIRGASGGEEEQ
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgattcccttcacagtaaatatcaaactgtcaccacggacactgactggagcgttgaat
attcagaataaaacagccgtggattggggatggcaaggactcattgctcaaggctgtcac
tcagttgtactggtcattgatcccgtaacagcacagacgatacaggctctcgagaggcat
aaagctaatgttgtcaaggttaaatgggccagagagaactatcatcatgatactgggtct
ccatattccctgcggctggcctccgcggatgtgtcgggaaagataattgtgtgggatgtg
atggcaggaacagctcgctgtgagatacaggagtacagcaaacccattcaagatatggag
tggatgtggaaccaggatgcgtcccgggacctgctgctggcagtgcaccccccaaactac
attgtcctctggaacgcagacacagggaccaaactctggaagaagagctatgctgaaaac
atcctgtccttctcctttgatccttttgacccttcaaatttagcactgttgaccagcgag
ggaatagtgttcatctctgacttctcccactccaaagccccgggcagcactgggaagaaa
gtgtacatctccagccccttctccagcccagtccacagcaaacccacccccaccaccggg
gcgaagaaggctctcaacaaggtcaaagtgctgatcactaatgaaaaaccaagtgctgaa
tctgtgacactaaacgactgcctccagctgtcatacctgccttccaaacggaaccacatg
ttgctgctgtaccccagagagatcctcatactggacctggaagtgagccaaacagtgggc
gtggtggctattgagaggactgggatacccttcattcaggttattccatgtcgacaaagg
gatactctcttttgtctgcatgaaaatggttgcataactctgagggtccggagatccaac
tgcagtgctgtcaaagaaccagatccagaccagtctgttcaagagctggcctatgatctc
cgctgtcagtgtgatgcaatgcgggtaacgaagaccgtgcgtccctatagaatggtgtgc
tcccctgttagtgagaactcggctgccctcatcatcagcgacgggagggtgatgatgtgg
gagctgaaggcttacgctactcggtccgacatacagtacagaaacagctcaggagtctct
cctctgtactctccagtctctttctgtggagtgcctctgagactgcaccagaggaggata
cctgatctttcactagacagcatgataggacaaagcatgattgctggggaggagcccccg
aaagcacccctgcagcaggaggtccagctcaaattcctcctcaccgggctgctctctggg
ctgcccctgcctcccttcgtcatccgaatgtgcccccccctcaccaccaagaacatcaac
caatatcaacctctgctggcagtcggtactagcaatggatcggtgctggtctaccatctg
accagcggattgctgcacaaggagttaagcatccattcctgtgaagtaaagggtatcgag
tgggcaaatttgactagctttctttcttttgccacgtcgacaccaaataaccaaggcttg
gtcagaaacgaactgcagctggtgaacctcccaacaggcagaagcttggcattccgtggc
gagctaggcaatgatgagacgccaatcgaaatgattaaagtgtctcatttgaaacagtac
ttggtggttgttttcaaagacaagccattggaactgtgggatatcagaacatgcactctg
ctccgagagatggccaagaacttcccggtagttacagctctggaatggtctccatcccat
aacttaaagagcatgaagaagaagcagctggcagcgcgagaagcaattgccaggcagact
gtttctgacacagaagtctgcagtgtggagtcttctgtcatcagcttggtgcaggaagca
gaaagcagatctgggctgagtcagagcatctctgcgcgagagcactttgtcttcacggac
atggacgggcaggtctatcatctcactgtggaggggaactctgtgaaggacggggctagg
attccccctgatggaagtatgggaagcattgcttgtattgcctggaaaggagacaccttg
gttcttggggatgttgatggcaacttgaacttttgggatttaaaagccaggctttcaaga
gggatacctacgcatcgtggctgggttaagaagatccgatttgcacctggaaaaggcaac
cagaaactgctggttatgtttaatgatggtgctgaagtgtgggatacaaaagaggtgcag
atggtgagcagtttaagaagtgggcggaatgtaaactacaaggtcttggatgtagactgg
tgcacctctgataaagttgtcctggcttctgatgatgggtgtattcgagttctcgaaatg
gccatgaagtcagccagctacagagtggatgaacaggagctgacagatccagtgtggtgt
ccttatctgcttctgccgagagcctccctggcattgaaggcatttttgatccatcagccc
tggaacggttcatacaccctggacgttgcccaaattaattacacagaaaaggaggatatt
aaaagcctaattcaagagcagcttaactccctgtccaatgacatcaagagcatttttctg
gatccagagtttagtttgctgcagagaagcttgttagtttcaaggctgtatggggatgag
tctgacctgcagttctggatggttgcagcccattatctgcacaagttttctcagggagag
cagctcagcgagccagctgctgctggggctgccgcagcacaggagaagccagagaaccac
ctcgacatctgctatgacacactgtgcgagaatgcatacttccagaaattccagcttgaa
agagttcacttgcaggaagtgaagaggtcaaactacgatcacaccaagaaatgtgctgac
cagctccttctgctgggacagactgaccgggcagtgcagttgctgctggaaacaaatgct
gagaacaccagctattactgcgattcactaaaagcctgtctggtgacaactattacctcc
tctggaccttcacagagcaccatcaaacttgtagccacaaatatgatagctaatgggaaa
ctggcagagggtgtgcagctgctgtgcctgatagataaagctgctgatgcctgtcgctat
ctacaaacatatggggaatggaatcgggcagcctggctcgcaaaggtgagactaaactct
acagagtgttcagaggttttgaaacgatgggtagatcatctgtgttcaccgcaaatcaac
cagaagtcaaaagccattttggttcttctttcattgggatgtttcctgaaagtcgtggaa
atactacacagcatgcggtactttgatagaactgcactgttcgttgaagtctgtctgaag
cacggagtaattgaagtcaatgacaacacaaataaactcatcagctctgtgtttgctgat
tatgcacggaccttaaaggcgctggggctgaaacagggagctgtcctgtttgcctctaaa
gctggggctggcggtacagacctgctgaacgagctcacagaaattagaggagccagcgga
ggagaagaggagcagtga
DBGET
integrated database retrieval system
