Polyodon spathula (Mississippi paddlefish): 121325774
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Entry
121325774 CDS
T07273
Name
(RefSeq) RNA-binding protein NOB1-like
KO
K11883
RNA-binding protein NOB1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121325774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121325774
03051 Proteasome [BR:
pspa03051
]
121325774
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121325774
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121325774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
HypA
DUF7129
DZR_2
Zn_ribbon_8
Cys_rich_KTR
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
121325774
NCBI-ProteinID:
XP_041124705
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All DBs
Position
13:34598366..34604773
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AA seq
438 aa
AA seq
DB search
MSAAMVEHVVADAGAFLKNAPLQDIGKNIYTIKEVVNEIRDKETKKRLAFLPYTLQFKDP
FPEFIQLVTEFSKKTGDYPSLSATDIKVLALTYQLESEHVGINHLKHEPERKVQVSSTRQ
HPEAPVNIAGFHLPSKKHQENAAAISSTQSQTPESSEFNTFQFWRNPLPSIEADLLELLN
AELVSVQDSSTGVEDLLSRENHEGEGDSKEGSEEEEEKAGEAAAGDDDNDDGGWITPSNI
KQIQQDMGCCETPSKMQVGCLTTDFAMQNVLIQIGLHVLSVSGMLITQARSYILRCHACF
KTTSNMTKVFCPNCGNKTLKKIAVTIKEDGSVQMHFSRNPKVLNPKGMRYSLPKPQGGKH
ANNPHLVEDQHFPQQRLSRKARQKTNVFDPDYTAGGSPFAENDIYSRAANLNIRDSQCGA
GRRRVNPNTANKKFVKKR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggccatggtagaacatgttgttgctgatgctggagctttccttaagaatgca
cctttacaggacattggaaagaacatttataccatcaaagaagttgtgaatgaaatccgt
gataaggaaacaaaaaaaaggcttgcctttttgccatacacgcttcagttcaaggatccc
tttccagagttcattcaattagtgactgaattctccaaaaagacaggtgattacccaagc
ttgtcggcaacagacatcaaggttttagccttgacctaccagcttgagtcggaacatgtg
ggaatcaaccatctgaaacatgaaccggaaagaaaagtccaagtgagcagcactcgacaa
catccagaggccccagtaaatattgctggatttcatctaccttcaaagaagcaccaagaa
aatgctgctgcaatcagttccacacagtcacagaccccagagagttcagagttcaacacc
ttccagttctggaggaatccactgcccagcatagaagctgatctattagagttactgaat
gctgagttggtgtcagtacaagacagctccacaggtgtagaggatcttctttccagagag
aatcatgaaggggagggggactctaaagaagggagtgaggaagaagaggaaaaggcaggg
gaagctgctgctggtgatgatgataatgatgatggaggttggataacccccagcaatatc
aaacagattcagcaggacatggggtgctgtgaaactccttccaaaatgcaagttgggtgt
ctgactacagatttcgccatgcagaatgttcttattcagattgggctccatgtgctctca
gtcagcggaatgttaatcactcaagccaggagttacatcctgcggtgccacgcatgcttc
aagaccacatccaacatgacaaaagtcttctgcccaaactgcgggaataaaaccttgaag
aaaattgcagtgacgataaaggaggacggcagtgtccagatgcacttctcacgcaacccc
aaggtgctgaatcccaaaggaatgcggtactccctgccaaagccccagggtgggaagcat
gctaacaacccccaccttgtggaggaccagcacttcccacagcagcggctgtcccgcaag
gcccggcagaagaccaacgtctttgaccccgattacactgctggggggtctcccttcgca
gaaaacgacatctacagccgggcggctaacctcaacatccgggacagccagtgcggagca
ggccgacgcagggtaaaccccaacaccgccaacaagaaatttgtcaagaaaagatga
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