Polyodon spathula (Mississippi paddlefish): 121325797
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Entry
121325797 CDS
T07273
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121325797
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121325797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_FBX41
F-box-like
F-box
zf-C2H2_6
zf-C2H2
Exonuc_VII_L
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
121325797
NCBI-ProteinID:
XP_041124782
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Position
1:103745739..103797021
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AA seq
813 aa
AA seq
DB search
MASLDLPYRCPRCGENKRFQSLSSLRAHLEYNHTYETLYVLSKSNSVCDATLIPLVSDGP
LLRRKDVFESTSFSAKEHHYPYDLPCANDLGLTAEVTCYIPNVEIPLSGIFVKEGMTSTT
PPTHTAVTAATAAASAVEAAYEEGLARLKVRAFEKLELDERLEKLSEEVEEKIAARVGRM
QVELEKKSLELEKAKQESIRLDQEKQDLENKAMELSRQVDVSVEMLATLKQDLVSKEQEL
NRKQQEVAQIDQFLQETAAREANAKVRLQQFIEELLDRADRAEKQLQSISSSGTTPNGSL
SRCSVPGCKSTGRQRERNSGSVSRGMYEVPDRCSSASTGASSRVKMLSQGSGGYDSDSIE
MHPLKECPEAQYYHVQCQSGEVGFERASMSQNWGLRKHAIQNWHRRPYHNSTEGEEGDVS
DGGSRTTESEAEVWEQERRASSETQQSNSNKGSRGYRLGTGRSEGRYKPCRHEKHSPSQS
NEVISPEILKMRAVLFCIFTYLDTKTLLRAAQVCKDWKFVARHPAVWTRVLLENGRISSK
FMTTVSQWCTQTHSLILQNLKPRQRGKKETKEEYLKSTRGCLEVGLEALLKAAGGNLLIL
KISHCPSVLTDRSLWLASCHCRALQAVTYRSATDPVGQEVIWALGAGCRDIISLQVAPLH
PCQQPARFSNRCLQTIGRCWPHLRALGVGGAGCGIQGLASLARNCMRLQVLELDHVSEIN
QEVAAEVCREGLKGLEMLVLTSTPVTPKALLHFNSVCRNLKSIVVQIGIVDYFEDPNSPE
ARKLFEEMVNKLQALRKRPGFSKILHVKADEVC
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcctctttggacctaccttaccgctgtccacgttgcggggaaaacaaacgtttccag
agcctgtcctcccttagagctcacctggagtataaccacacctatgagaccctctacgtc
ctgtcaaagtccaacagtgtgtgcgacgccaccctcatccccttggtgtctgacgggccc
ctgctgagacgaaaagacgtcttcgagagcacctctttcagcgcaaaggagcaccactat
ccctacgacctgccgtgtgctaatgatctgggcctgaccgcagaagttacttgctacatc
cccaatgtagagattcccctgagtggcatttttgtcaaggaaggtatgacctccaccaca
cctcccactcacactgccgtcacagcagctactgctgcagccagtgctgtggaagccgcc
tacgaggaagggctggcccggctgaaggtgcgagccttcgagaagctggagctagacgag
cggctagaaaagctctcggaggaggtggaagagaagattgcggcccgtgtgggccgcatg
caggtggagctggagaagaagagtttggaactggagaaggccaagcaagagagcattcgg
ctcgaccaggagaagcaggatctggagaataaggccatggagctctcccgtcaggtggac
gtctccgtggagatgctggccaccctcaagcaggacctggtttccaaggagcaggagctc
aacaggaagcagcaggaggtggcgcagattgaccagttcctgcaggagacagcagcgcgg
gaggccaacgcgaaggtgcgtctgcagcagttcatcgaggagctcctagaccgggccgac
cgcgccgagaagcagctccagagcatcagcagcagcggcaccactcccaacggcagcctg
agccgctgcagtgtgccgggatgcaagagcaccggccgacagagggaaaggaactctggc
tctgtttctcgaggaatgtatgaggtaccggatcgatgctcttcagcaagcactggagcc
tccagccgggtgaagatgttgtcgcagggctcgggggggtacgacagtgacagcattgag
atgcaccccctgaaggagtgccccgaggcacagtactaccacgtgcagtgccagtcaggg
gaggtggggtttgagagggccagcatgtcacagaactgggggctgaggaaacatgccatc
cagaactggcatcggcggccctaccacaacagcaccgagggggaggagggagacgtatcc
gatgggggctcccgcaccactgaatccgaggctgaggtctgggagcaggagaggagggcc
tcttcagagacacagcagtccaactccaacaaaggcagcaggggatacaggctcggcaca
ggtcggtcagagggcaggtataaaccctgccggcacgagaagcacagcccttctcagtcg
aacgaggtgattagcccggagattctcaaaatgagggctgtgctgttctgcatcttcacc
tacctggacacaaagaccctgctgcgggccgcccaggtctgcaaggactggaagtttgtg
gcccggcaccctgcagtgtggacccgggtgctgctggaaaatggccggatatcctccaag
tttatgacaaccgtgtctcagtggtgtacccagacacactccctcatcctccaaaacctc
aaaccacgacagagggggaagaaggagacaaaagaggagtacttgaaaagcacacgaggc
tgtctggaggtggggctggaggctctgctgaaggctgcaggaggcaatctcctgatcctg
aagatctcacactgccccagcgtgctgactgaccgctccctgtggctcgccagctgccac
tgccgtgctctgcaggccgtaacctaccggagcgccactgatccagttggccaggaggtg
atctgggcacttggggcaggctgcagagacattatttcactgcaggtggcgccacttcac
ccatgccaacagcctgctcgattcagtaaccgctgccttcaaaccattggccgatgctgg
ccccacctgcgagcgctgggtgttggtggtgcggggtgtggcatccagggcctggcatcg
ttagcgcggaactgcatgcggctgcaggtgctggagctggatcatgtgagtgagatcaac
caggaggtggcggcagaggtgtgtcgagagggactgaaggggctggagatgctggtgctt
acctccaccccggtcacgcccaaagctctgctgcatttcaacagtgtgtgtcggaatctg
aaatccattgtggtgcagattgggattgtggattactttgaagatcctaacagccctgaa
gccaggaaactctttgaggaaatggtgaacaaactgcaggcactaaggaaaaggccaggt
ttttcaaagattcttcatgtcaaggcagatgaagtttgttaa
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