Polyodon spathula (Mississippi paddlefish): 121325802
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Entry
121325802 CDS
T07273
Name
(RefSeq) zinc finger protein ZFPM1-like isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121325802
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121325802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCHC_ZFPM2
FOG1-like_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
121325802
NCBI-ProteinID:
XP_041124787
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Position
13:complement(31147621..31229846)
Genome browser
AA seq
1206 aa
AA seq
DB search
MSRRKQSKPRQIKRSIGDLEEGEDNLPDEHSLSEEGGGASEQEDSAEYDDSSPASVPLGS
EEATANESPGTPEGKEDQGPADRMKEEEEQEEKEDGNHWNGPDELELFGSDGDCKVRAKQ
GLLHETTWGPFRGKIQVEAPAVELVGGEPRITLVTDDRDCWLTRLSFTSDGTAANSIIYS
KGDELYCKTSQVILEGEILTAVLVSGQGEGSSPLKTESTYPAALHSDIQLLPQQAGMAAI
LATAVVNKDIFPCKDCGIWYRSARNLQAHLMYYCASRQKQDSSPPPEKPKDSYPNERICP
FPHCSKSCPSTSSLEIHMRTHSGERPFVCLICLSAFTTKANCERHLKVHTDTLNGICHGC
GFVSTTRDILYSHLVTNHMLCQPGSKSEVYTPGPGFPVLPLTAGLNPVDPASSVKCSLCG
FLADSPASLQQHAQVHMEGRAQGDPSHVQLQKSPKPSEHVEQEQDKGATPSVLHCNSPSP
RANGDSATPSQCNSPEALPAVRIKEEPKSAQNSESESETDDSAEQKGQVNPASDHSSGTS
SPRSLHSVKVKTELSSPTPGSSPVNFGTGPLQPGGTVFLPQYVFSPEASVVPQASEILAK
MSEMVHSRLKQGQGGVPPFYAGSPIQKGATCFECDINFNNINNYYVHKRLYCSSRHQHGD
NSVNVPHVKDSAAATVTATSTHGSSSAAGSRTASAPQSDTEPEPSASSTDAKVVEVKTEE
VGLKDTSSEGESGSRVSEGSQSPCNSVGEAEDDPTKTFCEACNIRFSRHDNYVVHKRYYC
ASRHDPPHQRPRSGKVTFLPQPVRTRKRRKLYEIHMARNEAVANQTAPVSIKQEPIALVG
RPLEPPSKPICLVSTAGSNAVPSPSSSPDGEGPIDLSKKPRLQEDQLVAPLLPLADYHKC
TACSISFNSVENYLAHKKYYCPATQLQQKAHDQLQKMKRAVSSSPKSRVLETSDLHEEHL
DLKVIKVEKNASAILVPTTACTNSTSLPGTCSLSSEVNLHQSPNMKALQVPPNVSMIVCP
YCPINGAIKGDLLEHFKNVHGLLLTMPAFGHAAQSINMKDVLQPSRSQESSRASPTLSPR
VTPTSPPKLRSKSALNGREQNETVSPLSNGSPGRINVSPKLVLSICPAVPVNISSVPEAL
REAGLKPVMPPLHADKPISSPNAIVPPVQNGNHRYCRLCNIKFSSLSTFIAHKKYYCSSH
SAEHVK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggagaaaacagagtaagccgcgacagatcaaacgctccataggggacttggag
gagggtgaagacaatctcccagatgagcacagcctatcagaagaggggggaggagcctcg
gaacaggaagattctgcggagtatgacgattcaagccctgcttcagttcctctgggtagc
gaagaagcaacagcaaatgaatcaccagggacaccagaaggtaaagaagatcaaggtcca
gcagatagaatgaaagaggaggaagagcaagaagagaaagaggatggaaaccattggaac
ggaccagacgagctggagctgtttggcagtgatggagattgtaaagtccgtgccaagcag
ggccttcttcacgagaccacctgggggccattcagggggaagattcaggtggaagccccg
gctgtggagttggtaggaggggaacccaggatcacacttgtgacagatgacagagattgc
tggctcaccagactctccttcacttctgatggaacagcagcgaattccatcatctacagc
aaaggtgacgagttgtattgtaaaacgagtcaggtgatcctggaaggggagattttgacg
gccgtcctggtgtctggtcagggggaggggtcctctccactgaagactgagtccacctac
ccagcagccctgcactctgacattcagctcctgccccagcaggctgggatggcagcaatc
ctagctactgcagttgtcaacaaggacatcttcccctgtaaggactgtgggatatggtac
aggagtgcgaggaacctccaggcccacctgatgtattactgtgccagccggcagaagcag
gactcctcccctccgccagagaagcccaaagactcctaccccaacgagcggatctgcccc
ttcccacattgcagcaagagctgccccagcaccagctccctggagatccacatgcgcact
cacagcggggagaggcccttcgtgtgtctgatctgcttgtctgcctttacaacgaaggcc
aattgcgaacgtcacctcaaagtccacactgacacactcaacggtatatgccatggctgc
ggatttgtctcgaccaccagagatattctgtacagccatcttgtaaccaatcatatgttg
tgccaaccagggtcaaaaagtgaagtatataccccaggtccagggtttccagtcctgcca
ttaactgcaggtttgaatccggtggaccctgcatcatcagtgaagtgctccctttgtgga
ttccttgcagactctcctgctagcctccagcagcatgcacaggtacacatggaagggaga
gcacagggtgacccaagccatgtccagctgcagaaatctcctaaacccagtgagcacgtt
gagcaggagcaggacaaaggggctacaccatcggtattgcactgcaattctcccagccca
agagctaatggcgatagcgcaactcccagccaatgcaattctccagaggctcttccagca
gtgagaattaaagaggaaccaaagtctgcccagaactcggaatccgaaagtgaaactgac
gacagtgcggagcagaagggccaggtaaaccctgcaagtgatcattcctctgggacctcc
tctcctcggagcctgcattcagtcaaggtgaaaactgaactctccagcccaaccccaggc
tctagtccagtgaattttggaacaggccccttgcagcctggaggaacagtttttctgccc
cagtacgtgtttagtccagaggcctcagttgttccccaggcttcggaaatccttgccaaa
atgtcagagatggtgcacagcagactgaaacaaggacaaggtggcgtcccaccattctac
gctggctcccccatccagaaaggggccacatgctttgagtgtgacatcaacttcaacaac
attaacaattactatgtgcacaagaggctgtactgctcaagccgccaccagcatggcgac
aactccgttaatgtaccgcatgtgaaggacagtgcggctgcaaccgtgacagccacctcc
actcacggctcttcatcagctgcaggaagccggactgcctcggccccgcaaagtgacact
gaacctgaaccatccgccagcagcaccgatgccaaggtggttgaggttaaaacagaggaa
gttggcctgaaggacacctcttctgagggggagagtgggagcagggtaagtgagggcagc
caaagcccttgtaactctgttggggaagcagaggacgaccctaccaagaccttctgtgag
gcctgcaacattcgatttagccgtcatgataactatgtggtccacaaacgctactactgt
gcttcaaggcatgatccaccccaccaaaggccgagatctggaaaagtaacattcctgccg
cagccggtacgcaccagaaagaggaggaagttgtatgagatacatatggcccggaatgaa
gcagttgccaaccaaactgcacctgtaagcatcaagcaagagcccatagccctggtaggg
agaccactagaacctccttcaaaacccatctgccttgtctccacagcagggagcaatgcc
gtcccgtctccaagttccagtccagatggagaaggtcccattgatctcagcaaaaaaccc
cgtcttcaagaagaccaactggtggctccattgctacccctggctgactatcacaaatgc
acagcttgtagcataagcttcaacagcgtggaaaactacctagctcataagaagtactac
tgtcctgcaacccagctgcagcagaaggcgcatgatcagcttcagaaaatgaaaagggcc
gtttccagttcaccgaaatcaagagtcttggaaacttcagatcttcatgaagaacatttg
gaccttaaggtaataaaagtagaaaagaacgcttcagcaatcctagttccaacaactgct
tgcactaactctactagtttacctggtacttgttcattgagctcagaagtgaacttgcac
cagtctccaaacatgaaggctttacaggttcccccgaatgtttccatgattgtttgcccc
tattgtcctatcaatggggccatcaaaggggacttgctagagcatttcaaaaacgtgcat
ggtctccttttgactatgccagcattcggacatgcagctcagagcatcaacatgaaggac
gttttacagccaagcagatctcaggagagcagccgcgccagccccacccttagcccaagg
gtaacccccacatcccctccaaaactgagatccaagagcgccctgaatggcagagaacaa
aatgaaacagtgtctcctctttcaaatggaagcccaggaaggataaatgtttcacccaag
cttgttctttccatctgtcctgctgttcctgtgaacatctcctcagtgcctgaagccctc
agagaggcaggactcaaaccagtaatgccccctctccatgcagacaagcccatctcctca
cccaatgctattgttcccccggtgcagaatggcaaccatagatactgccgcttgtgcaac
atcaagttcagcagtctctccacgtttatagctcataagaagtactactgctcttcacac
agtgcagaacacgtgaaataa
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