Polyodon spathula (Mississippi paddlefish): 121325827
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Entry
121325827 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: UPF0183 protein C16orf70 homolog
KO
K27411
phagosome assembly factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325827
Membrane trafficking [BR:
pspa04131
]
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Others
121325827
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
121325827
NCBI-ProteinID:
XP_041124847
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Position
13:complement(41921137..41932797)
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AA seq
426 aa
AA seq
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MLDLEVVPERSLGNEQWVFALGMPLAQAIAILQKHCRIIRNVQVLYSEQSPLCHDLILNL
TQDGIKLLFDACNQRLKVIEVYDLSKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEPNFAHGLASLQIPHGATVKRMYIYTGNSLQ
DTKAPAMPLTCFLGNVFAECIDVLRDGTGPLGLRLRLLTAGCGPGVMVDAKVRVLERCIY
FGDSCQDVLSTLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDAT
THLVKKFVLHTNFPGHYNFNIYHRCDFKIPLTNKKGGADSQTDAGTLTTYSKWDLIQEHI
GHPMEKPVVLHRSSSANNSNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPPXSSSHSRA
AEAPAQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaggtcgtgcctgagagatcgctgggaaatgaacaatgggtatttgca
ctagggatgccattggcccaggccattgctattctccagaagcactgccgcatcatcaga
aacgtgcaggttctctatagtgaacagagtcctctatgccatgacctcatactgaacttg
actcaggatggaatcaagctgctgtttgatgcctgcaatcagcgactgaaggtaattgaa
gtttatgacttgagcaaagtgaaattgaaatactgtggcgtgcattttaactctcaggca
atcgcgccgaccattgagcagatagaccagtcctttggagccacgcacccaggagtgtac
aatgcagctgagcagctttttcatcttaatttccgaggtctgtctttctcatttcaactg
gactcctggaacgaagctcccaagtatgagcctaactttgcccatggcttggcctccctg
cagattcctcatggagccactgtaaaacgcatgtacatctacactggaaacagtctgcag
gataccaaggctccagcgatgcctcttacctgctttctggggaatgtgtttgccgagtgc
atcgatgtattaagagatgggacgggacccttaggtttaagactccgcctcctcactgca
ggctgtggccccggggtgatggtagatgctaaggttcgagtgctggagcgctgcatatac
ttcggagactcgtgtcaggatgttctgagcactctggggtcaccacacaaggtcttctat
aaatccgaggacaagatgaagattcactctccttctcctcacaagcaggttccctccaaa
tgcaatgactacttcttcaactacttcacgcttggagtggatatactgtttgatgccact
actcatctggtgaaaaagtttgtgctacatacaaatttccctggtcattacaattttaat
atttatcatcgatgtgatttcaagattccacttacaaataaaaaaggtggtgctgattct
cagacagacgcaggcactttgacaacttacagcaagtgggatttgattcaggagcatatt
ggtcaccctatggaaaagccggttgtcctgcacaggtcatcttcagcaaacaacagcaac
ccgttcggatccactttttgcttcggactgcaaagaatgattttcgaggtgatgcagaac
aaccacatagcctcagtaaccctatacggcccccccnggtcgagcagccattctcgagca
gccgaagcacctgcccagtga
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