Polyodon spathula (Mississippi paddlefish): 121325833
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Entry
121325833 CDS
T07273
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04520
Adherens junction
pspa04810
Regulation of actin cytoskeleton
pspa04820
Cytoskeleton in muscle cells
pspa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121325833
04520 Adherens junction
121325833
09142 Cell motility
04820 Cytoskeleton in muscle cells
121325833
04810 Regulation of actin cytoskeleton
121325833
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121325833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121325833
04147 Exosome [BR:
pspa04147
]
121325833
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121325833
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121325833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Mob_Pre
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
121325833
NCBI-ProteinID:
XP_041124853
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All DBs
Position
13:9803958..9845534
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AA seq
1137 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQLMKRDMPPAFIKVENACTKLVQAAHMLKTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAVKIFVTTKSSKSQGVEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWANKDSESMKRALALIDSKISQAKDWLRDPNAQSGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSELRGRGQGTTPVAMQKAQQVSQGL
DLLSSKVENAARKLEAMTNSKQALAKNIDAAQNWLADPCGGPEGEEHVRGIMSEAKKIAD
LCEDPKEREDILRSLGEIAALTAKLSDLRRQGKGDTPEARALAKQIATTLQNLQSKTNRA
VANSRPVKAAVNLEGKIEQAQRWIDNPNIDDRGVGQAAMRGLVAEGRRLANAMLGPYRQE
LLGKCDRVEQLSAHLAELAARGEGESPQARAVAAQLQESLKDMKSKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPPGAPNREEVFDERAANFEHHAAKLGGTAEKAAAVGTANKSTVEG
IQAAVKSSRELTPQVVSAARILLRNPGNQAAHEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EIVKAASDNLSKTISPMVMDAKGVAGNIQDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLDQLHLNDEPAPPKPPLPEGEVPPPRPPPPEEKDEEFPEEKAGEMVNQQMMV
AARQLHEEARKWSSKPDVTEGNEAAEAGVDIDDEDDADDVEFALPSDNEDDYESELFLMP
TDQSVNQPIMAAAKSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGVTGNKRALIQ
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
NISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWARKTPWYQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttccatacaaagacgatagagagtatcctggagccagtggctcagcagata
tcccacttggtgataatgcacgaagaaggggaggtggacggtaaagcaatcccagaccta
actgcacccgtagctgcagtgcaggcggctgtcagcaacctcgtcagggttgggaaagag
actgttcagacaacagaggaccagctcatgaaaagagacatgccaccagcttttattaag
gttgagaatgcctgtactaagctggtccaggctgcccacatgctgaaaacagatccctat
tctgtgcccgctcgtgattacctcattgacggatccaggggaattctctcagggacttca
gacttgcttttgactttcgatgaggctgaggttcgaaaaatcattcgtgtgtgcaaaggc
attctggaatacctgaccgtggctgaagtggtggagagcatggaagatttagtaacgtac
actaaaaacctgggaccaggaatgacaaaaatggcaaaaatgattgacgagcgccagcag
gaactcacccatcaggaacacagagtgatgctggtgaactccatgaacactgtgaaagag
ctcctgccagtgctaatctcagctgttaaaatctttgtgacaacgaaaagttccaaaagc
cagggggttgaggaggctctgaagaaccgcaacttcaccgtggagaagatgagcactgaa
atcaacgagatcatccgcgtgctgcagctcacctcctgggacgaagatgcctgggctaac
aaagactctgaatcgatgaagagagctttggcacttattgactcaaagataagtcaggcg
aaagactggctgagagaccccaatgcacagtcaggtgatgctggagaacaagccatccgg
cagattctagatgaggctggtaaagttggagaattgtgcgctggcaaagaaaggagagac
atcctgggaactgcaaaaactctgggccagatgactgaccaagtgtctgaactgcgtggc
agaggtcaggggaccacccctgtagccatgcagaaggctcagcaggtctctcagggcctg
gatctgctgtcatcaaaggtagaaaatgctgcccgaaaactggaggccatgaccaattcc
aaacaggcccttgccaagaacattgatgctgcacagaactggcttgcagatccctgtggg
ggcccagagggagaggaacacgtacgcggaatcatgtctgaagcgaagaaaattgcagac
ctgtgtgaggaccccaaggaaagggaagacatcctgcgttcccttggggagatcgctgct
ttaacagccaagctctctgacttgagaaggcagggaaaaggcgacactcccgaggccagg
gccttagccaagcagattgccaccaccctgcagaacctgcagtccaagacaaacagagct
gtggccaacagtaggcctgtgaaggcagccgttaacctggagggcaagattgagcaggcc
cagcgctggatagacaatcctaacattgatgaccgtggcgtgggccaggctgcaatgcgg
gggctggtggctgagggccgtcgccttgccaacgccatgctgggcccttaccggcaggag
ctccttggcaagtgtgatcgagtggagcagttaagtgcacacctggctgagctggcagcg
cgtggggagggagagagtccgcaggcgcgggctgttgcagctcagctccaggaatcccta
aaagacatgaaatcaaagatgcaggaagcaatgacccaggaggtttcggatatcttcagt
gacaccaccaccccaattaaactgctggctgtggctgccacagcgccccccggagctcca
aacagggaagaggtgtttgatgagcgggctgccaacttcgaacatcatgctgccaaactt
ggaggaacagcagagaaggctgcagctgttggaacagctaataagagcaccgtggaaggg
atccaggctgctgtgaaatcatccagagagttaacaccacaggtggtgtcagctgctcgc
atcttgctgaggaatcctggtaaccaggctgcccatgagcattttgagaccatgaagaat
cagtggattgacaatgttgaaaaaatgacgggtttggtagatgaagccattgacacaaag
tccctgttggatgcatccgaagaagcgattaaaaaggacattgataagtgccgggtggcc
atggccaatgtccagccccagatgcttgttgctggtgccactagcattgcgcgccgggcc
aataggatcctgctggtagctaagcgggaagtggagaactctgaagatcccaagttccgt
gaaattgtaaaggctgcctctgacaatctgagcaaaaccatctcccccatggtaatggat
gccaagggtgtagctgggaacatccaggatccaggtctccagaagagtttcctggactct
ggatacaggattctgggagcggtagccaaagtccgagaggccttccagccacaggagcca
gacttccctccacctccccctgaccttgatcagctgcatttgaatgatgagcctgcacct
cctaaaccccctctcccagagggtgaagtgccaccccccagacccccaccccctgaggag
aaggatgaggagttccctgaggaaaaggcaggcgagatggtcaaccagcaaatgatggtg
gcagccagacagctgcatgaggaagctaggaagtggtccagcaagcccgatgtgactgag
ggtaatgaagccgctgaggcgggtgtagatatagatgatgaggatgatgcagatgatgtt
gagtttgccctcccctcagacaatgaagatgattatgagtctgagctgttcttaatgccc
actgatcagtcggttaaccagcccattatggccgctgctaagtctttgcaccaagaagca
cgcaagtggtccagtaagggaaatgacatcattggcgcagcgaagcgaatggccctgttg
atggcagaaatgtcccgtctagtgcgtggcgtcactggaaacaagcgtgcccttattcaa
tgtgccaaggacatcgccaaggcatctgatgaggtcactcgactggccaaagaagttgca
aagcagtgcactgacaagcgaatccgaacaaaccttctgcaggtgtgtgaacgtattccg
acgattagcacacagctcaaaatcctgtccactgtcaaagctaccatgttgggccgcact
aatatcagcgaggaagagtcagagcaggcgacagaaatgctcgttcacaacgcccagaat
ctgatgcagtctgtcaaggagacagtgagagaagctgaagctgcttccatcaagatccgt
acggatgctggattcaccctgcgctgggccagaaagactccctggtaccagtaa
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