Polyodon spathula (Mississippi paddlefish): 121325895
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Entry
121325895 CDS
T07273
Name
(RefSeq) ribonuclease P protein subunit p30-like
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121325895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121325895
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121325895
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121325895
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
121325895
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
121325895
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
121325895
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
121325895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
121325895
NCBI-ProteinID:
XP_041124902
LinkDB
All DBs
Position
13:complement(12849497..12855998)
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AA seq
286 aa
AA seq
DB search
MLLQRAVCLVNKLLTGLRLKTPQFTCVLSTSELPRFYFKSNQSYQSVISWDKRKLQNIIE
TAARLGYSTVAINHVVNLQEKKQGLQDVGKPTCVAELFTSPPIVQGKSKPIKIITRLTLV
VSEGSHCNELVSKTLQTACMTLDVDIIEIIMTEKQQFNFRRSPVNAAIDRGIVFELVYSP
AIKDSTMRRYTISNSLSLMNISKGKNIIISSEAEKPLELRGPYDIANLGLLFGLSEGDAK
AAISTNCRKALLHGETRKTAQGVVHSMKTTEAPEDKKEAPASKRKN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttcaacgtgctgtatgtttagtaaacaagctccttacaggattaagattaaaa
acaccgcaatttacctgcgttttatctacttctgaactaccgcggttttattttaaatcc
aaccaatcataccagtctgttatctcatgggataagagaaaacttcagaatattatcgaa
acagctgctcgtcttggatattcaacagttgcaattaaccatgtggttaacctccaagaa
aagaaacagggtttacaggatgttggcaaacctacttgtgtggcagaacttttcacctct
cctcccattgtacaggggaaatcaaagccaattaaaataatcaccagactgactctggtg
gtttccgaaggatcacattgcaatgaattggtaagtaagactttacagaccgcttgtatg
accttagatgtggacataattgaaattattatgacagaaaagcaacagtttaatttcaga
cgatccccggtgaatgcggcaattgacagaggaattgtctttgaacttgtttatagtcct
gctatcaaagattctacaatgagaagatatactatttcaaattcactcagtctgatgaat
atcagtaaagggaagaatattattatatcaagtgaagcagaaaagcctttagaattaaga
ggaccttatgacatcgctaacctagggttactgtttggcttgtcagaaggggatgccaaa
gcagcaatctcaaccaactgcagaaaagctcttctgcatggagaaacgaggaagacggca
cagggtgtagtgcacagcatgaagacaactgaggcccctgaagataagaaggaggcccca
gcctcaaaaaggaagaactga
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