KEGG   Polyodon spathula (Mississippi paddlefish): 121325918
Entry
121325918         CDS       T07273                                 
Name
(RefSeq) protein transport protein Sec31A-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121325918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121325918
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pspa02044]
    121325918
Membrane trafficking [BR:pspa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    121325918
Secretion system [BR:pspa02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   121325918
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_EIPR1 Beta-prop_EML EIF3I TPR_Sec16 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_DCAF12 Prp18 VP4_2 SMAP
Other DBs
NCBI-GeneID: 121325918
NCBI-ProteinID: XP_041124927
LinkDB
Position
13:complement(11596337..11618130)
AA seq 1222 aa
MKLKEIQRTANQAWSPASQHPTYLATGTSAQQLDASFSTSAALEIFELDFSDPSLDMKLS
GSLSTTNRFHSLIWVNFGAVTAGSSGMLVGGGDNGAVTLYNPTQILASEKEAIVGQSEKH
TGPVRALDFNPFKSNLLASGANDSEIYIWDLNNFCNPMTPGAKSQPLEDVSVVAWNRQVQ
HILASAHPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRLPVV
QIWDLRFASSPLKLLENHTRGILSISWSQADPELLLSSAKDNRILCWNPGTGEVIYELPT
SSQWCFDVQWCPRNPAILSAASFDGRISIYSVMGGSLDAQGQGHVDKMSSSFDAMDPFGT
GQSLPPLQVPQKVAKTKVILPLKKPPKWIRRPVGASFAFGGKLITFENAKPAQQQVPQPN
PRHVFISQVITETEFLQRSSELQSALHTGSFSSFCEAKIQKAATDSEKNIWSFLKVNFED
DARSKFLRLLGYSKEELEKKIASFLGKSLQPNSNGVDANDLAEKIQLLSAQRSDESSAAG
DTSSSPTSSTQSDFFSNLPNDKPKFQISTTTDTDGLISQALLVGNFEGAVELCLNDARFA
DAVILAISGGEELLKETQQRYLAKQKTDISVLVSSIVNRNWTDIVQSCDLENWKEALAAL
LTYARPEEFSELCGILGSRLEREREERMCLRACLCYICSGNTEKLVDCWVLKNDTSSPLA
LEDLVETVMVLRKSIEQLRGGDMVTQSAVLAEKLTQYANLLAAQGSLAAAMSYLPASSSQ
ALIMQLRDRLFHAQGEAVAGQQPPPFPYNRVQVGGGARPVSTAQAQQSGHRTQQQPAFHP
QMQPSGQPPVFTPQPMSADSVPHSGMPAISHGPPASMFSRPQYPRHPATASAFSQPFSQL
GGPPSGQAAFPTHPYLLGPEPHAAQPSGLQSMPGPTVSGPTFRPASVPFYQPSGPLPPSS
QAAGLPPMFSGGARTATSMPASQPPTTYPLGPGYPQGGPGAPAAKTFAAASLPPPPTGYF
PWLENRCDDEGSQEGWNDPPNVRGGPRKKKLHENYTLPAPITSPVMNFPMEHKALQPQAS
LSQDTIQASPGAPKEANIQTLHQLPAEKIEKKDIPQEHLMLKTTFDGLLKRCFLAAGDPQ
TKRKLDDALKRLEYLYDKLREQVLTPNVLRGLHEIGRCIEGRNYQQALAVHTQIVSSSNF
SDISAFMPILKVVMTIANKLSI
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgaagctaaaagaaattcagagaacagccaatcaggcatggagccctgcatcccagcat
cctacctacttagcaacaggtacatctgcccaacagctagatgcatcttttagtacaagt
gcggccctggagatttttgaactggatttctcagatccttcactagacatgaagttaagc
ggttccctttcaaccacaaacaggtttcacagcctgatctgggtgaatttcggcgcagtc
acagcaggatcctcagggatgcttgtgggtgggggtgacaatggagctgtcactctgtac
aatccaacacaaatactggcttcagaaaaagaggccatcgtaggacaaagtgagaagcat
acaggccctgtccgggcccttgacttcaacccctttaagagtaaccttttggcctctgga
gccaatgattcagagatctatatctgggacttgaataacttttgtaatccaatgacacca
ggggcaaagtcacaacctcttgaagatgtcagtgttgttgcctggaataggcaggtgcag
cacatccttgcttcggctcaccccagtggtaaggcagttgtgtgggacctgagaaaaaat
gaacccatcattaaaatcagtgatcacagcaacagaatgcattgctctgggatgttgtgg
caccctgaagtggccactcagctggtgctggcatcagaagatgatcgccttccagtagtc
cagatatgggacctgcggtttgcctcttctcctctaaaattgctggagaaccacacaaga
gggattctgtctatttcctggagccaggctgacccagagctgctgctcagtagtgctaaa
gacaacaggattttgtgctggaatccaggaacaggagaggtgatttatgagttgccaaca
agcagccagtggtgcttcgatgtccagtggtgtcccaggaatcctgccattctctctgct
gcctcatttgatggtcggataagcatttactcagtaatgggaggaagcctagatgctcaa
ggacaaggccatgttgataagatgtcttcctcgtttgatgccatggacccttttggaact
gggcagtccctccctcctctacaggttcctcagaaggtggccaagacaaaagtcattctt
cctcttaaaaagcctcctaaatggatcaggaggcctgtgggggcatcatttgcatttggt
gggaagctgataacctttgaaaatgccaagccagcacaacagcaagtgccacagcccaat
ccacgtcacgtgttcatcagccaggttatcacagaaactgagttcctccaacgctccagc
gagctccagtcagcactgcacactggaagtttctccagcttctgcgaagccaagattcag
aaggcagcaacagactctgaaaagaacatctggagcttcttaaaggttaactttgaagat
gatgctcgtagcaaattcttacgactcctgggctacagtaaagaagaactggagaaaaag
attgcctctttcttaggaaaaagtctacagcctaacagtaatggggttgatgctaatgat
cttgcagaaaaaatacaacttttatctgctcagagatcagacgaatccagtgccgcagga
gatacttcatcatcccccacatcctcaacacagtctgactttttcagcaatcttcccaat
gacaagcccaaatttcagatttctacaaccacagataccgatggtctgatcagccaagca
ctcctagtaggtaattttgaaggggccgtcgagctctgtcttaacgatgcccgctttgct
gatgctgttatcctggctattagtggtggagaggagctgttgaaggaaacccagcagaga
tatctagcaaagcagaaaaccgacatttcagtgcttgtgtcctccatagttaaccgtaac
tggacagatattgttcagtcatgtgatttagaaaactggaaggaagccttagctgccctc
ctgacttatgcacgtcctgaggaattctcggagctgtgtggtattctggggtctcgtctg
gagcgtgaaagagaagagaggatgtgtcttcgggcctgtctgtgttatatctgctccggg
aacactgagaaactggtagactgctgggtactgaaaaatgatacctcatcacctttggct
ttagaggatctggtagagacggtaatggttttacgcaaatcgattgaacagcttcgtggt
ggtgatatggtaactcagagtgctgtcctggcagagaaactgactcagtatgccaatctg
ttagcagctcaagggagtcttgctgcagccatgagttatctgcctgcaagcagcagtcag
gctttaatcatgcagttgcgggacagactgtttcatgctcagggagaggctgttgcaggt
caacaacctcctcccttcccttacaacagagtccaggtggggggaggcgctcgccctgtt
tctacagcgcaagcccagcaatcgggccacagaacccagcagcagcctgcatttcatcct
cagatgcaaccttcagggcagcctccagttttcactccacagccgatgtcagcagactca
gtgccacactctggtatgccagctatttcccatggacctccagccagcatgttctccaga
ccacagtaccctcgacaccctgccactgcttcagcattctctcaacctttcagccagcta
ggagggcctccaagtggacaagcagcttttcctacccatccttatctattgggacctgag
ccgcatgcagcacagcccagtggcctacagtcaatgcctggccccactgtgtcagggcct
acctttaggcctgcctctgttcccttttaccagccctctggtcctctcccgccatcctcc
caggcggctggtcttccaccaatgttctcaggcggtgctcgcactgcgacctccatgcca
gcctcacagcctcccacaacctatccactgggaccaggatacccacagggtggcccagga
gctcctgctgccaagaccttcgctgctgcttctcttcctccccctcccacaggatacttt
ccgtggctggagaaccgttgtgatgatgaaggctctcaagaaggatggaatgatcctcca
aacgtgcgaggagggccaaggaagaaaaagcttcatgagaactacaccctaccagccccc
atcacatcgcctgtcatgaacttccctatggaacacaaagcactccaacctcaggcctct
ctatctcaggacactattcaggcatcaccaggggcacctaaagaagccaatatccagact
cttcatcaactaccagcagagaagattgaaaagaaggatattccacaagagcatctaatg
ttaaagacaacctttgatggactgctaaagcgctgcttcctagctgctggtgacccgcaa
acgaagagaaaacttgatgatgctttgaagaggctggaatacctctacgacaagctgaga
gagcaagtgcttactcctaacgtcctccggggactgcatgagattggacgctgcattgag
ggtcgaaactaccagcaagcacttgcagtccacactcaaattgttagcagcagcaatttc
agtgacatttctgcattcatgcccatccttaaagtagtaatgacaattgctaataagctc
agtatctga

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