Polyodon spathula (Mississippi paddlefish): 121325941
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Entry
121325941 CDS
T07273
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121325941 (rrp12)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
Other 90S particles
121325941 (rrp12)
Pre-60S particles
Other pre-60S particles
121325941 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
121325941
NCBI-ProteinID:
XP_041124960
LinkDB
All DBs
Position
13:9032156..9043836
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AA seq
1286 aa
AA seq
DB search
MVKAGKLRSGTAQKLKRWKKGHSSDSNPETSRYRQAARSRFFSRPSARSDLTVDALKLHN
DLQSGPLEHKESKDDTPLEVDEPALTERTSATFLSGLSDCSNLTFSKVQRYWESNSASHK
EICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVESSESVGAVAYLLNLVLKRVPSPV
LNLKFSDTSKVFMNIMSSQASSESPSALRWILSCLANLLRKQDGSVWSYPSTLQVYHGLL
SFTVHSKPKVRKAAQHGVCSVLRGSDFMFGDSAPLYHPAAQSTAKFCIKEMEQAGGNKED
TTVLHVLGLLKELLPCFPHGAVKSCCETLLRVMTLSHVLVTAGAMQAFHKLFSAKPNSST
LPAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHTHLSSLQISLCLGHLPRFFTAAM
TCFLSPHVQVVSTAAQTLKTLLKECVAPCVAEIGSITSTAPAGNAAYICKVFRLIEEGLT
YRYYSSWPFVMQVLSCFYQVAGKEAHPIMVKSLQSLCDLRLTPQFPFSGELDQTVGSAVE
SMGPEIVLRAVPLQIDGNEDDLEFPRSWLIPVIRDRVKNTELGFFTTYLLPLATTLKNKA
DELSQAGRNLESKVYMTLHLQIWSMLPGFCTQPTDLATSFKGIARVLGMVISDRPDLRLT
VCHAIRTLINKSSKKEEDHAEVARFAKNFLPILFNVYTQQPAVVDSAALRMPVLDTIKVY
LTITDQEMVCTFLQKATEKLCSLESSGFTRLAVMDLIMAMAPCVDESTMTKTFELVKPYL
ASKESGLQKKAYRILEEMCGGEREPCRQFVLTNLEELKQTLLGSLKSASSPAKRPRLKCL
IHIVKHLSPEHTGFITAVLPEVMICTNEVAVGARRNAYTLLVEIGRAFIRFCGSQKEAVL
QYLELIYAGFTGSVTMISCTVLALTRLVYEFKDSLERSVIEPLLRNVCLLLSSRTREVVK
TALSFIKVILFIMDVKMLASHMPLLMEGIGNIKEDMRRHFRTKLKNIFTKFIRKFGFELV
KNMLPEEYHKVLVNIRKVEARNKQRKILKHDADSESENEEDMSKPKGDSIEDILADSEDE
DEEEKKGRGRKKQPGQKGRAWLKEGEGDEPLNFLDPMVSQRVLATNPDVKKNTKVRHDFK
LTSDGRLIIREEADDDEKSKGAKEEMEDILEEAGVKSRNQKRKFKEGNLDEDMEMDPQFQ
YKAGGSGIHRPLSKKGDSGGQYKAKSGKGDIKKKGQHDPYAYIPLKKAQLNRRKKAKLQG
QFKGLVRGAQKGARTGRKMQRKRRNV
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagctgggaagctacgttctggtacagcacagaagctaaaacgctggaaaaag
ggacacagcagcgactctaacccggagacaagccgctacagacaggcagcgagaagccgg
ttcttcagtcgcccctcagcgagaagtgacctgacagttgacgcccttaagctccacaat
gacctgcagtccggtcccctggagcacaaggagtctaaagatgacactcccttggaggtg
gatgagccagcactcaccgagcgaacctcggccaccttcctgagtggcctgtctgactgc
tcgaacctgaccttcagcaaagtgcagcgctattgggagtccaactctgcatctcacaag
gagatttgtgcagtgctagctgctgtaacagaagtgattcgatcccaaggtggaaaggag
acagagactgaatattttgctgctttgatgaccacgctagaagttgtggaatccagtgaa
tcagtgggtgccgtggcttaccttctcaacctcgtgctaaagcgagttcccagcccagtt
ttaaacctgaagttttcagacacatcaaaggtcttcatgaacatcatgtcctctcaagcc
agttcagaatccccctctgccctgcgctggatcctctcctgcttggcaaatctgcttcgg
aaacaggacgggtctgtatggagctacccatcaacacttcaggtttaccatggactgctg
agtttcactgttcactccaaacccaaggtccgtaaggcggcccagcatggcgtgtgttct
gtcctgaggggcagtgacttcatgtttggagactctgctcctttataccatcctgctgct
cagtcaacggccaaattctgcattaaggagatggaacaagctggtggcaataaagaggac
accacagtcctacacgtcctggggctcctgaaggaactgctgccatgcttcccacatggt
gctgtcaagtcctgctgcgagacgttgctccgggttatgacactcagtcatgtgcttgtg
acagcaggtgccatgcaggctttccataagctattcagtgccaaaccaaactcctccaca
ttgcctgcagaactcaatgcacagataattacggctctgtatgattaccttcccagtgaa
aatgacctgcagccactgctggcgtggctggctgtaatggaaaaagcacacactcacctg
tccagtctgcagatttcgctctgtttgggtcacttgccccgtttcttcaccgctgccatg
acttgctttttgtctccgcatgtgcaagtcgtttccacggcagcacagacattaaagact
ttactgaaggagtgtgttgctccgtgcgtggcagagatcgggtcaatcacatcgactgct
cccgcaggcaatgctgcttacatctgtaaagtatttcgactgatagaagagggtctcacg
tatcgatactattcctcctggccctttgtaatgcaagttctcagctgcttctaccaggtg
gcagggaaggaggcgcaccccatcatggtaaagagtttgcagtccttgtgtgacctgcgc
ttgacgcctcagttccctttctcaggtgagctggatcagactgtggggtctgcagtagag
agcatgggccctgaaatcgtcctgagagccgtacctctacagatcgacggcaatgaagat
gatcttgaatttccaaggagttggctgatacctgtgatccgggatcgtgttaaaaacaca
gagctaggattcttcaccacataccttctgccactggcaactactctcaaaaataaagct
gacgagcttagtcaggcagggcgaaaccttgagtctaaggtgtacatgactctgcatcta
cagatctggtccatgctgccagggttctgtacgcagcccactgatctggccacctctttt
aaaggcattgctcgggtgctcggcatggttatcagtgaccgacctgacctgaggctcact
gtctgccatgctatacggacactgatcaacaagagtagtaagaaggaggaggatcatgca
gaagttgcccgctttgcaaaaaatttcctgcccatcttgttcaacgtttatacccaacag
cctgctgtagtggacagtgctgcactgaggatgcctgttctggacaccattaaggtgtac
ctgacgatcactgaccaggagatggtttgtacatttctgcagaaagccaccgagaaactt
tgcagtctggagagctcgggcttcacaaggctggcggtgatggacctgataatggcgatg
gctccgtgtgtggatgagtccacaatgactaaaaccttcgagctcgttaagccctatctg
gcgagcaaggaatctggattgcagaagaaggcctaccgtatcctggaggagatgtgcgga
ggggagagggagccgtgtcgtcagtttgtcctcacaaacctggaggagctgaagcagacg
ctgctcggctctctgaagagtgcttcctctccagccaagaggccaagacttaagtgcttg
atccatattgtgaaacatctgagtcctgaacatactggattcatcacagctgttctccca
gaggttatgatctgcaccaatgaggtggctgtaggtgctcggcgaaatgcatataccctc
ctggtggagatcggccgtgcattcatacgcttctgtggcagccagaaagaggcagtactt
caatacctggaactgatctatgcaggattcactggatcggtaacaatgatcagctgcact
gtcctggctctgactcggcttgtttatgagtttaaagattccttggagcgctcagttatt
gaaccgttgcttcggaatgtgtgtctcctgctcagctccagaacacgagaggtggtgaag
acagccctcagctttattaaagttattttatttataatggatgttaaaatgctggcgtcc
cacatgcctctattgatggagggaattggaaacattaaagaagacatgaggcggcatttc
cggacaaaactaaagaatattttcaccaaattcatccgcaagtttgggtttgagttggtg
aaaaacatgcttccagaggagtaccataaagtgctggttaatatccgcaaggtagaagcc
aggaacaaacagaggaaaatcttgaagcatgatgctgattccgagtcggagaatgaggag
gatatgtcaaaacccaaaggggacagtattgaagacatcctggctgattctgaggatgag
gatgaggaagagaagaagggacggggaaggaagaagcagcctggacagaagggaagggcg
tggctaaaggagggagagggtgatgagccgctgaatttcctggatcccatggtttcccag
agggttcttgccacaaatccagatgtaaagaagaacacaaaggtccgtcatgatttcaag
ttgacttcggatgggcgtttgattatccgcgaggaagcagatgacgacgagaaatctaaa
ggtgcaaaggaggaaatggaagacatactggaggaagctggtgttaagagtagaaatcag
aaaagaaaattcaaagagggcaacttggatgaggacatggagatggacccacaatttcag
tataaagccgggggctctgggattcatcgaccgttgtctaaaaaaggagactctggtgga
cagtacaaggcaaagagtggtaaaggtgacataaagaagaaaggtcaacatgatccatat
gcctacatcccactgaaaaaggctcagctgaaccgaaggaaaaaagcaaaactgcaaggt
cagttcaaagggttggttagaggagcacaaaaaggggctcggactggaaggaaaatgcag
aggaagaggaggaatgtgtaa
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