Polyodon spathula (Mississippi paddlefish): 121325991
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Entry
121325991 CDS
T07273
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121325991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121325991
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121325991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
121325991
NCBI-ProteinID:
XP_041125050
LinkDB
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Position
13:complement(41884959..41907268)
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAISELPHVERNLQEIQQAGERLRARTLTRTSQETADVKA
SILLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFVTAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQEAEPSFLSDTGPSGRSALDS
VEVAYGRQIYVFNEKIVNGHLQPSLGDLCASVAERLDDKNVSEMWAMVKQMTDVLLVPAR
DTLNSRTSVEMQMAFVSRALQFLEQSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGLQDGEVEGHPVWALIYYCIRCGDLVAAMQVVNRAQHQLGEFKNWFQEYMSST
DRRLAPTAENKLRLHYRRALRNNTDPYKRAVYCLIGKCDITDNHGEVADKTEDYLWLKLN
QVCFEEDSTNSPQDRLTLPQLQKQLLEDYGESHFAAGQQPYLYFQVLFLTAQFEAAVAFL
FRMERLCSHAVHVALVLYELRLLLMSSGHSARLLSQEPGDPPMIRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGESMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISTVAQEAENKGLFEEAVKLYELAKNPDKVMGLMNKLLSPVVSQASAPQSN
RERLKNMALAIAERYRTQGISAEKSVDSTFYLLLDLITFFDEYHAAHVDRAYDVMERLKL
VPLSQDSVEERVAAFINFSDEVRHNLSEVLLATMNILFTQYKRLKGTTPASPARPQRALE
DRDSQLRTQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaaggattcggggagctgctccagcaggctgagcagctggctgcagagacg
gaggctatctcggagctgccacacgtggagcgaaacctccaggagatccagcaggcgggg
gagaggctgagggccagaaccctgacccgcacctcgcaggaaactgccgatgtcaaggcc
tccattctacttggctccagaggactggatatttctcatatctctcagcgactggaaagt
ctgagtgcggctacgacatttgaacccctcgagccagtgaaggacacagatatacagggc
tttctgaagaacgagcgtgacaatgcgctgctgtcagccatcgaggagtccaggaggagg
accttcgtcactgcggaagagtaccacagggagtcgatgctggtggagtgggagcaggtg
aagcagaggatcctgcacacgctgctggcttcaggagaggacgcactggacttcacccag
gaagccgagcctagtttcctcagcgacacgggtccttcggggcgcagcgctctggatagc
gtggaagtggcttacggacggcagatttatgtgttcaatgagaaaatagtaaatggacac
ctgcagcccagcctgggggacctgtgtgcttctgtagcagaacgtctggatgacaagaat
gtctctgagatgtgggccatggtgaagcagatgacagacgttctgctggttcctgcccgg
gacacgctgaacagccgcaccagcgtggagatgcagatggcgtttgtgagtcgggccctg
cagtttcttgagcagagttataaaaactacaccatggtgacagtctttggtaacctgcac
caagctcagctgggaggagtgcccgggacctatcagcttgttcgcagttttcttaatata
aagctgcctggcccccttccagggctccaggacggggaggtggaagggcatcccgtgtgg
gctctgatctactattgcatccgctgcggggacctggtggcagccatgcaggtggtgaac
cgagcgcagcaccagctgggagagttcaagaattggtttcaggagtacatgagcagcact
gacagacgattggctcccacagcagaaaacaagcttcgactgcattacagacgcgccctg
agaaacaacacagacccctataagagagccgtgtactgcctgatcgggaagtgcgacatc
accgacaaccacggcgaggtggcggacaagaccgaggattacctgtggctcaagctgaac
caggtttgcttcgaggaagactccaccaactctccacaggacaggctgaccctaccacag
ctccagaaacagttgcttgaagattacggagagtcgcacttcgctgccggtcagcagccc
tacctgtatttccaggtgctgttcctgacggctcagtttgaggcggccgtcgccttcctg
ttccgtatggagcggctgtgcagccacgccgtgcacgtggccctggtgctctacgagctc
agactcctcctgatgtcctccggtcacagcgcacggctcttgagccaggagcctggggat
cccccaatgataagaagattgaatttcatccgtctgttgatgctgtacacaagaaagttt
gagtcgaccgacccaagagaagcgcttcagtacttttattttctcagaaacgagaaagac
agccaaggagaaagcatgttcatgcgatgtgttagtgagcttgtcattgaaagcagagag
tttgacatgcttcttgggagacttgaaaaagatggcagcagaaagcctggagttattgat
aagtttgctggagacacgagggccatcatcagcaccgttgcacaggaggcagagaacaaa
gggttatttgaagaagctgttaaactatatgaactggcgaagaatccagacaaggtaatg
gggctgatgaacaagctgctcagtcctgtggtctcacaggccagtgctccacagtctaac
agagagaggctgaagaacatggccctcgccattgcagagcggtatagaactcagggcatt
tctgcagaaaagtctgttgacagcactttctatcttctgctggaccttataacctttttt
gatgagtatcacgccgctcatgttgaccgcgcgtatgatgtgatggagcgtctcaagttg
gttccactcagccaagacagtgtggaggagagggtcgctgccttcataaacttcagtgat
gaagtcagacataacttatccgaagtgctcctggccaccatgaatattctgttcactcag
tacaagaggttaaagggcacgaccccggcatcccccgcacgaccccaaagagcgctggag
gacagggactctcaacttcgaacccaagcccgtgctctgatcacattcgcgggtatgatt
ccgtaccgcatggcgggagacaccaacgctcgactggtgcagatggaggtgctcatgaac
tag
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