Polyodon spathula (Mississippi paddlefish): 121326006
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Entry
121326006 CDS
T07273
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121326006
Lectins [BR:
pspa04091
]
C-Type lectins
Others
121326006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_3
Kelch_4
EGF_LMN_ATRN
Kelch_6
CUB
Kelch_2
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_laminin
PSI_integrin
EGF_2
TMEM100
FBA_3
Motif
Other DBs
NCBI-GeneID:
121326006
NCBI-ProteinID:
XP_041125071
LinkDB
All DBs
Position
13:complement(683189..858252)
Genome browser
AA seq
1368 aa
AA seq
DB search
MDAGNMLRRGLQLFKRQTYPHSGWLDVNRYLLLYVLLYLVLHAEASLSRSCDKNCHSGRC
FNGTCICDQGWVGEQCRHCQGRFKLTEPSGYLTDGPIHYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYVYDGDSIYAPLIAVFSGLIVPEVRGNETVPEVVTTSGYALLHFFSD
AAYNLTGFHIFYSMNSCPNNCSGHGKCTTGNSIASRVYCECDKYWKGEACDIPYCKNNCG
SPGHGYCDLTGEKLCVCNDSWQGPDCSLSVPSTESYWVLPNVKPFSPSVSRTSHKTVMHG
KFMWVIGGYTFNYSSFQMVLNYNVESSIWNVVPINSGPLQRYGHSLALYQGDVYMYGGKM
ETNNGNVTDELWVFNIPSQTWSAKSPTVLVHGQQYGVEGHSAHVIELDSGEVIMILIFGY
SAVYGYISNVQEYNLRTNTWLVPETKGAIVQGGYGHSSVYDRMTKCVYVHGGYKALPANK
YGLVDDLYRYEVRTRTWTILKESGLARYLHSAVIISGVVLVFGGNTHNDTALSNGAKCFS
SDFIAYDIACDEWKMLPKPNLHRDFNRFGHSAVISNGSMYVFGGFSSVLLNDVLVYKLPS
CEAFRAEEPCLDAGSGIRCLWDGERCVSWDPRHTNGTFPNIQCPPKKTSADDRCYRYTDC
ASCTANTNGCQWCEDKKCISASSNCTVSVKNYSKCHVRNEHICTKLTSCKSCSLNLNCQW
DQRQQECHALPAHLCGEGWNHVGDACLRINASRESYDNAKLYCYNLSGNLASLTTSKEVD
FVLDELHKYTVQKISPWVGLRKINISYWGWEDMSPFTNTTVQWQPGEPNDSGFCAYLEKA
EVAGLKANPCTAMADGLICEKPVVSPNQNARPCKTPCSLRTTCSNCTSQGMECMWCSSAK
RCVDSNAYVISFPYGQCLEWQTGNCLPQNCSGLRTCSQCLEQPGCGWCNDPSNTGKGKCI
EGSSRGPMKGIGKQSQDLVLDQSLCLKDKSFEWDFIHCPACQCNGHSTCVNSSVCEQCRN
LTTGKQCEACMAGYYGDPTNGGKCQGCKCNGHANSCHSQSGKCFCTTKGIKGDQCQLCDS
ENRYLGNPLRGTCYYSLLIDYQFTFSLLQDDDKHYTAINFMANPEQPNKNLDMSINASNN
FNLNITWSVGSTAGTISGEEIPIVSRSNIKDYRDSFSCEKFSFRNNLNITFYVYVSNFSW
PIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKVKQTCWASRRREQLMRERQQ
MASRPFASVDVALEAAGGEQTDPLRGPLEGALKPVAVEPCSGSKAAVLTVFMCLPRGSSE
APPPGQSGLAIASALIDISQQKPMDCKEKSSGVRNRKQPPPTHQGTCV
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgggaatatgctgagaagaggactacagcttttcaaaaggcaaacatacccg
cattctggatggctcgatgtcaacagatatttattgctttatgttttgttatatctggtg
cttcatgccgaggcgtccctctcaaggtcctgcgataagaattgccattctggaagatgt
ttcaacgggacgtgcatctgtgatcagggatgggttggagagcagtgtcggcattgccag
ggcaggtttaaattaactgaaccttctggatatttaacagatggaccaatacattataaa
tataaaacaaagtgcacctggttaatcgagggatatcctaatgcagtattaaggttacga
tttaaccactttgctaccgagtgtagctgggaccatatgtatgtatatgatggagactct
atatatgcacctttaatagcagtgtttagtggtcttatagtcccagaggtgcgagggaac
gagactgtaccggaggtagttaccacttctggatatgctttgctgcacttttttagtgac
gctgcttacaatttaacaggattccacattttttactcaatgaattcctgccccaacaat
tgctcaggccatgggaagtgtacgacaggtaactcgattgccagcagggtgtactgtgaa
tgtgacaaatactggaaaggggaggcatgtgacattccctattgcaaaaacaactgtggc
agcccgggccacggatattgtgacctgacaggggagaagctgtgtgtttgcaatgacagc
tggcaaggtccggattgctctctatcagtcccttctacagaatcgtactgggtgctgcca
aatgtgaaaccgttcagcccgtccgtcagccgtacttcccataagactgttatgcacggg
aaattcatgtgggtgatcggaggctacacgttcaactacagctccttccaaatggtttta
aattataatgttgagagcagtatatggaatgttgtaccaattaacagtggtcctctccag
aggtatgggcactctctcgctttgtatcagggtgacgtctacatgtatggaggtaaaatg
gaaaccaataatgggaatgttacagatgaattgtgggtattcaacatccccagccagacc
tggtctgcaaagtctcccacggtgctggtgcacggccagcaatacggcgtggaggggcac
tctgctcatgtcattgagctggacagtggagaggttataatgatcctcatttttggatat
tcagctgtatatggctacatcagcaatgtgcaggaatacaatttaaggactaacacatgg
ttagtgccagagactaaaggagccattgtccaaggtggttacggccacagcagtgtttat
gatagaatgacaaaatgtgtttacgtgcacggaggatacaaagctctcccagcaaataag
tacggcttggtggacgatctctatagatacgaagttcgaacccggacatggacaatcttg
aaggaaagtgggctggcgcggtacctccattcggctgtcatcatcagtggtgttgtgctt
gtctttggaggaaacacacataatgatacagctctgagcaacggagcgaagtgcttctca
tctgatttcatagcgtacgacattgcctgtgatgaatggaaaatgttgccaaaacccaat
ttgcacagagacttcaaccgctttgggcattctgcggttatcagtaatggatccatgtat
gtgtttggaggtttctccagtgtgctcttgaatgacgtcctggtttacaagctgcccagc
tgtgaggctttcagagcagaggagccgtgcctcgacgcgggctcaggaatccgctgtctt
tgggatggagagcgctgtgtgtcctgggatccccgtcacaccaatggcactttcccaaac
attcagtgcccgccaaagaaaacgtctgcggatgacaggtgttacagatacactgactgt
gccagctgtacggcaaacaccaacggctgccagtggtgtgaagacaaaaagtgcatttca
gcatccagcaactgcactgtgtctgtgaagaattactcaaagtgccatgtgagaaacgaa
cacatctgcacgaagctgaccagctgcaagagttgctctttaaacctgaactgccagtgg
gatcagcgacagcaggagtgccatgcgctgcctgctcatctctgtggagagggctggaac
catgttggggatgcctgtctgcggatcaatgccagccgggagagctatgacaacgccaaa
ctgtactgctataatctcagtggcaacctcgcctccctaaccacttccaaagaggtggat
tttgtccttgatgaactgcacaagtacactgtacagaagatctctccttgggttgggctg
cgcaagatcaacatctcttactggggctgggaggacatgtccccgttcaccaacacaacc
gtgcagtggcagcctggagagcccaatgactctgggttctgtgcttatctggagaaggcc
gaggtggcaggtctgaaagccaatccgtgcactgcaatggcagatggcttaatctgtgag
aagcctgtcgtaagtccaaaccagaatgccaggccctgcaagacaccatgctccctgaga
acaacctgctccaactgcaccagccaaggcatggagtgcatgtggtgtagcagcgccaag
cgctgtgtggactccaacgcctacgtcatctccttcccatacgggcagtgcctggagtgg
cagactggaaactgcctgcctcaaaactgctcaggactccgtacctgcagccagtgtctg
gagcagccaggctgcggatggtgcaatgaccccagcaacaccggcaaaggaaagtgcatt
gaaggctcatcaaggggaccaatgaaggggattggaaagcagagccaagacctggtgctt
gatcagagcctgtgcctcaaggacaaaagctttgaatgggattttattcattgtccagcg
tgccagtgcaacggacacagcacatgtgtgaacagcagcgtttgtgaacagtgcagaaac
ctgaccacaggaaagcagtgcgaggcctgcatggctggatactatggggaccctacgaac
ggagggaaatgccagggatgtaaatgcaatggacatgcaaatagttgccattcgcagtca
ggaaaatgcttctgcactaccaaaggaatcaaaggagaccaatgtcaactgtgtgactca
gaaaacaggtatctgggcaatccgctgaggggaacatgctactatagccttctgattgac
tatcagttcaccttcagcctcctccaggacgatgacaaacactacactgctatcaacttc
atggctaatccagagcagcccaacaagaatcttgacatgtctattaatgcatcaaacaat
ttcaacctgaatattacgtggtcagttggttcaacagctgggaccatctcaggagaggaa
atcccaattgtctccaggtctaacataaaggactacagagacagtttctcctgtgagaaa
ttcagcttccgaaacaacctcaacatcaccttctacgtgtacgtcagcaatttctcatgg
ccaataaaaatacagattgcgttctctcagcacaacagcataatggacctggtgcagttc
tttgtaacattctttagctgcttcttgtccctgcttctggtcgctgctgtggtttggaag
gtaaaacagacctgctgggcctcgagacgcagagagcagctcatgagggagaggcagcag
atggccagccgcccctttgcttctgtggacgtggcactggaagcagcaggaggagagcaa
actgatcctctgcgagggccactagagggagccctgaagccggttgctgtagagccctgc
tccggaagcaaggcagcagtgctgaccgtgttcatgtgtctcccaagaggctcatcggag
gcacctcctcctggccagtccggtctggctattgccagcgccctcattgacatctcacag
cagaaacccatggactgcaaagagaagagctcgggagtacggaatcgaaagcagccccct
ccaacacatcaagggacttgtgtctga
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integrated database retrieval system
