Polyodon spathula (Mississippi paddlefish): 121326044
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Entry
121326044 CDS
T07273
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121326044
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121326044
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121326044
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
121326044
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
121326044
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121326044
Prokaryotic type
Other AARSs
121326044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
121326044
NCBI-ProteinID:
XP_041125121
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All DBs
Position
13:36408958..36418121
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AA seq
609 aa
AA seq
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MLSVVRAARQQFIQTFGVGGQRAKYVFPGLATFPLLQGNRWRGDKSELKRQIKAEKKAAE
KDARVKELVEQKKKAGDTGDQNLYGAEDETLDPNQYFEIRTQAIQDLKGTSEDPYPHKFH
VDLSLSEFIEKYNHLQPGDHLTDVILNVSGRVHAKRASGAKLLFYDLRGEGVKLQVMANS
RNYKSEEEFVRINSKLRRGDIIGVHGNPGKTKKGELSIIPKEMTLLSPCLHMLPHLHFGL
KDKETRFRQRYLDLILNDYVRQKFIIRAKIITYLRSFLDQQGFLEIETPMMNLIPGGAVA
RPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCEF
YMAYADYQDLMEITEKLLSGMVKHITGGYKVQYHPEGPEGPAFELDFTPPFRRVSMVYDL
EKELGVKFPPPDTYDSNEARKFFDELCAQKGVECPPPRTTARLLDKLVGDFLEVTCINPT
FICDHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNSYTELNDPIKQRELFEQQAKAKA
EGDIEAMFIDETFCTALEYGLPPTAGCGIGIDRLTMFLTDSNNIKEVLLFPAMKPDDHKA
APPPDGTSV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgtggttagagctgctaggcagcagtttatccaaacgtttggggtcgggggt
caaagggcaaagtatgtgttccctggcctggccaccttccctttgctccaagggaatcgc
tggcgaggtgacaaaagtgagctgaagcggcagataaaggctgagaagaaggctgcagag
aaggatgctcgagtcaaagaactcgttgagcaaaagaagaaagcaggagatacgggagat
cagaatctttatggagccgaggatgagacgctggaccccaatcaatactttgagattcgc
acccaggcaatccaggacctcaagggcacatcagaggatccctaccctcacaaattccac
gtggacttgtctctgagcgagttcattgaaaaatacaaccacctgcaaccaggagaccat
ctgacagacgtcattctaaatgtgtctggccgtgtccatgccaagcgtgcctctggagct
aagctgcttttctatgacctgcgaggtgaaggggtcaagctgcaggtcatggccaactcc
aggaactacaagtcggaggaggagtttgttcgcatcaactcgaagctgcggcggggtgac
atcatcggggtgcacgggaatccagggaaaactaagaagggcgagctgagcatcatcccc
aaggagatgaccctgctgtcgccctgtctgcacatgctgcctcacctgcacttcggactc
aaggacaaggaaacccggttccggcagcgctacctggacctgatccttaatgattatgtg
aggcagaaattcatcattcgggccaagatcatcacctacctgcgcagtttcctggaccag
caaggcttcctggagattgagacccccatgatgaacctgatccctgggggcgctgtagcc
cgaccttttgtcacctatcacaatgacctggacatgaacctgtacatgaggatcgcacca
gagctgtaccacaagatgctggtggttggagggattgaccgggtgtatgaggtcgggcgg
cagttcagaaacgagggcatcgaccttacccacaatcccgagttcacaacatgcgagttc
tacatggcgtacgccgattaccaagacctcatggagatcacggagaagctgctgtcaggc
atggtgaagcacatcactggtgggtacaaggttcagtatcacccagaggggccagagggg
ccagcctttgagctcgacttcacccctcccttcagacgggtgagcatggtgtatgacctg
gagaaagagctgggggtcaaattccccccacctgacacttacgactccaacgaggcccgt
aagttctttgatgaactctgtgctcagaaaggagtggagtgtccacctcccagaaccaca
gcccgtctgctcgacaagctggttggcgatttcctggaggtgacctgcatcaaccccacc
ttcatctgcgatcacccccaaatcatgagccctctggctaaatggcatagatcgcagaaa
ggtctgacggaacgatttgagctctttgtaatgaagaaggaaatctgcaacagctacacc
gagctgaacgaccccatcaagcagagggagctctttgagcagcaggcaaaggcgaaggca
gagggcgatattgaggccatgttcattgacgagacattctgcactgcccttgaatatggg
ctcccccccaccgcgggctgtggcataggcatcgaccgtcttaccatgttcctcaccgac
tccaacaacatcaaggaggtgctgctcttcccagccatgaaacctgatgaccacaaggca
gccccccctcctgacggaacgtcggtatag
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