Polyodon spathula (Mississippi paddlefish): 121326077
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Entry
121326077 CDS
T07273
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121326077
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121326077
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
bHLH_NPAS4
HLH
bHLH_HIF1A
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
121326077
NCBI-ProteinID:
XP_041125165
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All DBs
Position
13:complement(33596093..33621059)
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AA seq
553 aa
AA seq
DB search
MAKAMLYAGRKRSRPVSRGSKPLPLDRVKTNPSKRHRDRLNTELERLASLLPFPEHITNK
LDKLSIMRLAVSFLRAKAFFGNSLQKKYQVPALLSPLTVNQTSINQQGVPSPGFMVPEGD
LLLQAVNGFVLVVTGEGTIFYTSHTIQDHLGFHQSDVINQSVDELIHTEDREEFNRQLHW
ALDPPKKAGGERYTSDPAMLYQPTQLPPENSPFFDRSFVCRMRCLLDSNSGFLTLHCQGK
LKFLNGMNRKSQSVDKAPSQLALFTIAVPVQPPAIMEIRTRSLAFRSKHQLDFSPISIDA
KGKLLLGWTEAELKTHSGYYFIHFDDILYCAENHLKMMKTGDSGVTVFRLLTKKHTWIWI
TAIARVTYKDDKPDCIIATQRPLTDAEGEEHLLKRAKHDKFLLDKQSLLYNSSDLLSLQA
SRCCQQVEIEGHAAERHFDPSSILADPLHQDQVSYIYHPPEESAPFLSPSTTPSSSPGLQ
TEKATWPELPADVSIWEMLWRYGLSQEDLELIQMDDTMVVHPGEFLPHGVTNVSGPDPSQ
NVHCTGLSCTSVQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaatgctgtatgcaggcaggaagagaagtcggcctgtatcaagaggcagt
aagccgttgcctctagatagagtgaagacgaacccttcaaagagacacagggaccggcta
aacaccgaactggagcgcctggcctcgctgctgcctttcccagagcacatcaccaacaaa
ctggacaaactctccatcatgaggcttgctgtcagcttcctgcgagccaaggccttcttt
ggtaactctttgcagaaaaaataccaagttcctgccctcctttcaccactgacagtcaac
caaacaagtataaaccaacagggggtgccatcccctggtttcatggtgccagagggagac
ctgctgctccaggcagtgaatggttttgtgctggtcgtgacgggagaggggactatcttc
tacacctcacacaccattcaggaccacctcggcttccaccagagtgatgtgatcaatcag
agtgtggatgagctgatccacacggaggacagagaggagttcaacaggcagctgcactgg
gcacttgatccacccaagaaagcaggaggagagaggtacaccagtgacccagcgatgctg
taccagcccacacagctgcccccagagaactcacccttctttgacaggagcttcgtctgc
cgaatgcgctgcctgcttgactccaactctggcttcttgaccctgcactgtcaggggaag
ctgaagtttctcaatggtatgaacaggaagtcccagagtgtggacaaggccccctcccag
ctggccctctttaccatcgcagttccggtccagccacctgccatcatggagatccggacc
aggagcctggccttccgcagcaaacaccagctagacttctctcccattagcattgatgca
aaggggaaactgcttcttggctggacggaggctgagctgaagactcattctggatattat
ttcatacactttgatgacattttgtactgcgctgagaaccatttgaagatgatgaagaca
ggggatagtggggtgacagttttccgccttctcacaaagaagcatacgtggatttggatc
actgctatcgccagagtgacttataaagatgacaaacccgactgcatcattgcgactcaa
cggccactgacagatgctgaaggagaggagcaccttctcaagagagcaaagcatgacaag
ttcttgctggacaagcagtctctgttgtacaacagtagtgatctcttgagcctgcaggcc
agcaggtgttgccagcaggtggagatagagggacacgctgcagagaggcactttgaccct
agcagcatcctggcagaccctcttcatcaggatcaagtttcctatatctaccaccccccc
gaggagtctgcacccttcctgtccccttccaccaccccttcctcttccccaggcctgcag
accgagaaagcaacctggccagagctccctgcagatgtgagcatctgggagatgttgtgg
cggtacgggttgagtcaagaggacctggagctcatccaaatggatgatactatggtggtt
caccccggagagttcttaccacatggtgtcacaaatgtctccggccccgatcccagccag
aacgtgcattgcacaggactctcctgcaccagcgtccagtga
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