Polyodon spathula (Mississippi paddlefish): 121326110
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Entry
121326110 CDS
T07273
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein homolog isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121326110
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
121326110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
121326110
NCBI-ProteinID:
XP_041125212
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Position
13:complement(8483162..8489908)
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AA seq
709 aa
AA seq
DB search
MKCLLVASESAEVLFYWADREFEQNIQDQYGPRQYEGDTYPAFEDSFNTLFAPLIISCST
LIEKINDTYTSFVTENTHLYILHQFGECLYIAVNGDGEETEADLRRKIYVMKKLIEVHFG
MVTLNSALLRKELRPQDTEQRIQLWKMLQSLLETYSLLREQDQSFLVEAVERLIHPTLCE
QCIEFLERRVVQQINGSPERAGEEVLHAFILVNTKLLAFYSSRNASSLKPSDLLALILLV
QNLYPSNNELDDTALELSTQPVYSSSSSGGSIPIQRAGGRGGTSTNTTNSPSTTQEGPEV
FYTPEPSPTGRESDAAEMEGKSTPVFQFVDPDVQMAEDSLKTQASQPPDPATPRRVFLEA
TFKEGYCPMMPHSMYCLPLWPGISVVLLTKIPHSQVAVSLYQFLEAFTVLEKKLSEGQEG
GSLPRMQPPLSELRNKLDKFIRALGSNEIQFPQLQNTWTDFKNKAFSRAAQGTSRELLMS
CRAMKTWLCAVYRHYFVVQSHRSPQRLSVSLQEKALAMMQEKLMDWKDFLLVKSKRNITM
VSYLEDFPGLVHFIYVDRTAGQMIAPSLNVTDLSTTELGKGPLAHFIKSKVWSLVGTARR
YLQKGYTTVTLRDGDYYFCYFLWFESETGYKLEGIELPVLSEDSAPIGMLAGDYYRKLLR
YYSKDHHTEIVKCYELLTIHLGVIPTDCIVQHCCELAKKLWEPTRIPLL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgctggtggccagtgaaagcgcagaggttctgttctactgggccgaccgt
gaattcgagcagaacattcaagatcagtatggacccaggcagtatgagggagacacatac
cctgcatttgaagacagcttcaacaccctgttcgctcctctgatcatctcctgcagcacc
ctgattgaaaagattaacgacacctacacctcctttgtcacagagaacacccatctctat
atcctccaccagtttggagaatgcctgtacattgctgtcaacggggatggagaggagact
gaggcagacttgaggaggaagatctacgtgatgaagaagctgatcgaggtgcacttcggc
atggtgaccctcaacagcgccctcctgaggaaggagctccgaccccaggacacagagcag
cggattcagctctggaagatgctgcaaagccttctggaaacgtacagtctcctgagagaa
caggaccagagctttctagtggaggcggtggagcggctgatccaccccacgctgtgtgag
cagtgcatcgagttcctggagcggcgtgtggtgcagcagatcaacgggagccccgagcgg
gctggggaagaggtgctgcatgctttcatattggtgaacaccaagctgctcgccttctac
tccagccgcaacgccagttcgctcaagccctctgacctgctggccttgatcctcctggta
cagaacctgtatcctagcaacaatgagctggacgatacagccctcgagctgtccacacag
cctgtctacagcagcagcagcagcggtggcagcatccccattcagagggcaggaggaaga
gggggcacttctactaacaccaccaactcacccagcacaacacaagagggtccagaagtg
ttctacaccccagagccgtctcccacaggcagggagtcagatgcagctgagatggaagga
aagagcacgcctgtctttcagtttgttgatcccgatgttcagatggcagaggacagcctg
aagacccaagcgtcccagccccctgacccagcgaccccccgcagggtctttctggaggcc
acgttcaaggagggttactgtcccatgatgcctcactccatgtactgcctgcccctctgg
ccgggcatctcagtggtgctgttgaccaagatcccacacagtcaggtggccgtgtctcta
taccagtttctcgaggcgttcactgtgctggagaagaagctgagtgagggacaggagggg
ggttcgctcccccgcatgcagccccccctctctgagctccgtaacaagctggacaagttc
attcgggccctgggcagcaatgagatacagtttcctcagctgcagaacacctggactgac
ttcaagaacaaggcattttccagagcagcgcagggaacctccagagagctgctgatgtcc
tgccgtgcaatgaagacttggttgtgtgctgtctacaggcactacttcgttgtgcagagt
cacaggagccctcaacgcctctcagtgagcctgcaggagaaggccctcgccatgatgcag
gaaaagcttatggattggaaggacttcctattggtgaagagcaaaaggaacatcaccatg
gtgtcctacctggaggacttcccaggactggtccactttatctacgtggatcgcacggca
gggcagatgattgccccctccctcaatgtgacggacctctctaccacagagttgggcaag
gggccgctcgctcacttcattaagagcaaggtgtggtctctggttggaacagcacggcgc
tacctacagaaagggtacactacagtgaccctgagagatggcgattattacttctgctac
ttcctgtggtttgagagtgaaacgggatacaagttagaggggattgagctgcctgtcctg
tctgaggactctgccccgatagggatgctcgctggtgactattacaggaagcttctgagg
tactacagcaaggaccatcacactgagatcgtgaaatgttatgagttgctgaccatccac
ctcggggtgattcccactgactgcatcgtccagcactgctgtgagctggccaagaagcta
tgggagcccacgagaatccccctgctgtag
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