Polyodon spathula (Mississippi paddlefish): 121326112
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Entry
121326112 CDS
T07273
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1-like isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121326112
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121326112
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121326112
Ion channels [BR:
pspa04040
]
Other channels
Mechanosensitive channel (Piezo)
121326112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
121326112
NCBI-ProteinID:
XP_041125215
LinkDB
All DBs
Position
13:37655081..37713336
Genome browser
AA seq
2562 aa
AA seq
DB search
MEPHVLCGLLYWLLLPLCLLAACLFRYNALSLVYLLYLLLLPWFPGPSERTIRGHTGRFI
KALFGTSIFFLLGHVVFQICLHTVPGLDDILGHNCSMWVTLSRHVGVTRLPLDDLSNASR
LLAPDVGISVVSLVTLCLSVRLLKRRGVTPGETVETEPLKQGEPAEGVGEEESEEDEEED
GEAANYEEEEERERRNVEEDSLEGEQPLANRAALLAAQLRVTALKFLKNVGKILAIALLG
LAGITLPSAFSGVYFLLFLGVCTWWACHFPISPLGFNTLCVMVGFFTAGHLVCLYIYQVP
FFQDLFPPASIWARVLGFKEIITPSNCAAPHDLILNVGHDWPVYVNPGILLLLYFTMASV
LKMGSLASSKKKEVEDARSSSQAQHSAVEVELTPRLSQRQSAEDDTKQMLLPANAMPRSD
AESVTVHVMSGSSQAELGAPGGENGDSPLHMIGCMILQQSYICALIAMMVWSITYHSWLT
FVLLLWACLIWIVRSRHRFAMICSPFILLYGMSLCSVQYIWAMDLEPELPDRVGFMSLKQ
LGLERSPQPCLRLGAMLLYTLTFWLLLRQSVKEMFTRKKAATAPLLEVTTRDTEAGRNES
LLKVLGERVMDFYAKYWIYVCGGMFIVVSFAGRLVGYKIVYMLLFLLCLCLYQVYYTLWR
RLLKVFWWLVVAYTMLVLIAVYTFQFEDFPTYWKNFTGFTEHQLADVGLETFELSDLFTS
ILIPGFFLLACILQLHYFHQPFMRITDLEHTPQKDRRLKNRKEPGSKSELLHEGEGLEDE
EEELETEPGDDQLEDEAVPSKWGLVVDRLMVLFKKFSEILTRVQVFIWRVLELHILKMVA
FFIIWVALQELSVMNLVLVVLWSFAVPYSRFRHMASCLSTIWACIIIVCKMLYQLSIVNP
IEYSSNCTKPYPNETNLEEDNIPYSVLYKAPVDPANWFGFRKDTPILGYIKNHLLVLMLL
VFEATVYRHQAHYYRQQQTSPTATHTIFSEVSREHLDHSVLDCVKYFVNYWFYKFGLEIC
FLLTVNVIGQRMNFLVIFHGCWLVVILTSRRRAAIAKIWPKYCLFLVLFLLYQYLLCLGI
PPALCIDYPWRWNTTLTINSALIKWLYLPDFSTLPNSRNLIYDFLLLLCASQQWKVFEDE
KTEEWIQLAGHNTDEANPMQGKMNPVPNFINCRCYLDMLKVVVFRYQFWFVLAVLFVAGS
TRISIFGLGYLLACFYFLLFGTQLIQKPAKSRLALWDCLIIYNVAVIISKNMLSLLACVF
VEQMQNRFCWLIQLFSLVCTVKGYYNPKELRDDNKDCFLPVEEAGIIWDSICCFFLLLQR
RVFLSHYFLHVVADQRASAQQASRGFKLFKASIVKSMNIHQEAEKKSLAQLKRQMERIRS
KQKKYKEGRRSSETKEEAESIERGANRKTSKQKKKWWRPWQDHATVLHSGEYYLFESDSE
EEEELQGEEQKPPRQSAFQLAYQAWVMNAKSALNDRQQHQRVLHRQEKEKARQGSPRLPV
MGDECEADTTDLSVQDEELEEGDSGKSDIMQRLLEMLKFLWVLFLAMVDGATQWLNTLTK
QYVNTSTVLWIERYLLTHKISQEQKPGKDISEDQRFLDSPTEETASQRLGLEELDMEKDT
ENIQTNSTSGCELEELLSTDHTTPFTTGYSTRTNSWERILDLDPEQDPDATHSRLRTASE
ILTDRHFLFEELEESQQFYSSQNRALKLLLALYNLLASNSEMVCYFIIVLNNMVTASVIS
LVLPILIFLWAMLSIPRPSKRFWMTAIVYTEVMVIVKYLFQFGFFPWNSYYDTKLNEGKP
FFLPRILGLEKMDNYVKYDLIQLLALFFHRSLLRRYGLWDQDGQLAEKKKKTMTVETSEE
MEGGPLNPDPSQNDSEGAKPGQDLVPPGSEEDEPGQDEERKPDQNQEPPPSQDTPVPPVK
GDKGSSLRFRKKRKQAKESSQEKKKAREKCSERASKKLGTLSEKVKLLLLTLIRSVYKPV
HEFFHNILHTEYRAATDVYALMFLTDVVDFVIVIFGYWAFGKHSAAADITSTLSEDQVPE
AFLVMLLIQFSTMVIDRALYLRKTVLGKLIFQVLLLFGIHFWMFFILPAVTERMFSQNTV
AQLWYFVKCIYFALSAYQIRCGYPTRILGNFLTKTYNHLNLFLFQGFRLVPFLVELRAVM
DWVWTDTTLSLSDWMCVEDIYANIFIIKCSRETEKKYPQPRGQKKKKIVKYGMGGLIIFF
LICIIWFPLLFISLVRSVVGVVNHPIDVTVTIKLGGYEPLFTMSAQTQSIQPYTQQDYDK
LTQEFKTNPVAMQFITLYSYEDIVTANIEGSSGSVWRISPPSRRKMMEELLNSSADMTLR
FTWNYQRDLGRGGTVEHTFDRHSIDLNPNDPVRKELASLLMGNDTNAVRVHHMFPNYIRA
PNGAEAKPVKQLYPDDEDSYQDVTLTLIKDRSSETNGLQEWWDIHIADCDRAKEDCDVLP
MVIFSDKVSPPSLGFLAGYGIMGLYLSVVLVIGKFVRGFFSEISHSIMFEELPCVDRILK
LCTDIFLVRETGELELEEEMYSKLIFLYRSPETMIKWTCDKD
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggaaccccatgtgctttgtggattgctctactggctcctactgccgctctgtctgcta
gcggcctgcctgttccggtataatgccctgtcattagtttatcttctttacctgctcctg
ttgccatggtttccaggacccagtgaacgcaccatacgaggtcacacaggccggttcatc
aaggccctgtttggcaccagcatctttttcctgttaggtcatgtggtttttcagatctgc
ttgcacaccgtcccgggactggacgatatcctgggacataactgcagcatgtgggtgact
ctttcgaggcacgttggggttaccagactgccgctagatgacctctcgaatgcgtctcgc
ctgctggctccggacgtggggatctccgtggtgtctctggtcactctgtgtttatctgtg
cggctgctgaaaagaaggggggtcacacctggagagactgtggagacagagcccctgaaa
cagggggagcctgcagaaggagtcggagaggaggagtctgaggaggacgaggaggaggat
ggtgaggcagctaattatgaggaggaggaggagagggagaggaggaatgtggaggaagac
tctctggagggggagcagccgttggcaaaccgtgccgccctgctggctgctcagctccgc
gtcactgccctcaaatttctcaagaatgttggcaagatcctggctattgcactgctgggc
ttggcagggatcaccctcccatccgccttctccggtgtctacttcctgctgttcttaggg
gtgtgtacatggtgggcctgtcacttccctatcagccccctgggtttcaacacactgtgt
gtgatggtgggcttcttcacggcgggacacctggtctgtctgtacatctaccaggttccc
ttcttccaggacctcttcccaccagctagtatatgggccagggttcttggtttcaaggaa
atcataacaccgtcaaactgcgcagcgcctcatgatctcatcttgaacgtgggtcatgat
tggccggtttacgttaacccagggattctgctcctcctctacttcacgatggcttctgtt
ctgaaaatgggaagcctggcttccagcaagaagaaggaagtggaggacgctcgttcctcc
agtcaggcacagcacagcgcagtggaggtggagctgacacctcggctgtcacagagacag
agcgccgaggacgataccaagcaaatgttgctgcctgctaatgcaatgcctagatctgat
gcggagagtgtcacagtacatgtgatgagtggctcaagtcaagctgaactaggtgcccct
ggtggagagaatggggacagtcctctgcacatgattggctgcatgatcctgcagcagagc
tacatctgtgctctcattgccatgatggtgtggagtatcacttatcacagctggctgaca
ttcgtcctcctgctgtgggcctgtctgatctggattgtgcgctcccggcatcgctttgca
atgatctgctcccccttcatcctgctctacggcatgtcactctgcagcgtccagtacatc
tgggcaatggacctggagcccgaactgcctgaccgagtcggattcatgagcctgaaacag
ctgggcctcgagcgcagcccccagccctgcctcagactgggagcaatgctcctgtatacc
ctgaccttctggctgctcttgcgtcagtcagtgaaggagatgttcaccaggaagaaggca
gccacagctccactactggaggttaccacaagagataccgaggctggccggaacgagtcc
ctgctgaaggtgttgggcgagcgggtcatggatttttacgccaagtactggatctacgtg
tgcgggggcatgttcattgtggtcagctttgctggcaggctggtcggatacaagatagtc
tacatgctgctcttcctgctctgcctgtgcctctatcaggtgtactacacactgtggcgg
cggcttctcaaggtcttctggtggctggtagtggcttacaccatgctggtgctcattgct
gtctacacattccagtttgaggacttccccacttattggaaaaacttcacaggattcacc
gaacaccagctggcggatgttggtctggagacctttgagctgtctgatctcttcaccagc
atcctcatcccagggttcttcctgctggcttgtatcctgcagctgcactacttccaccag
cccttcatgaggatcacagacctggagcacacccctcagaaagaccgcagactaaaaaac
cggaaggagccaggcagcaaatcagagctcctgcatgagggggaggggctagaggacgag
gaggaggagctagagacggagcccggggatgaccaattagaagatgaagccgtgcccagt
aagtggggtctggtggtggaccggctgatggtcctgttcaagaagttctccgagatcctg
acccgggtgcaggtcttcatctggagggttctggagctccacatcctcaagatggtggct
ttcttcatcatctgggtggctctgcaagagctttcggtgatgaacctggtgcttgtggtg
ctctggtccttcgccgtgccctactcccgcttccgccacatggcctcctgcctctccacc
atctgggcttgcatcatcattgtctgcaagatgctttaccaactgagtatcgtcaacccc
attgagtactccagtaactgcacaaagccctatcctaacgagaccaatctagaggaagac
aacatcccatactctgtcctgtacaaggcgccggtggacccggccaactggttcggcttc
cggaaagacacccctatcctgggctacatcaagaaccacctattggtgctgatgttgctg
gtgtttgaggccacggtgtaccggcaccaagcacactactaccggcagcagcagacttcc
cccacggccacacacaccatcttcagtgaggtgtcgcgagagcacctggaccacagtgtt
ctggactgtgtcaagtactttgtcaactactggttctacaagtttgggctcgagatctgc
ttcctgttgacggtgaatgtgattggtcagcgcatgaatttcctggtaattttccatggc
tgctggttggtggtgatcctgacaagccgtcgccgggctgccatcgctaaaatctggccc
aaatactgcctgtttctggtgctgttcctgctctaccagtacctgctgtgcctgggcatt
cccccagcactctgcattgattacccatggcgttggaacactacactcaccatcaactcg
gccctgatcaagtggctgtacctgccagacttctccacattgcccaattccagaaacctt
atctatgacttcctcctcctcttatgtgcctcgcagcagtggaaggtcttcgaggacgag
aagacagaagaatggatccaactggctggacacaacacagacgaggccaatcccatgcag
ggcaagatgaaccccgttcccaacttcatcaactgcaggtgttacctggacatgctcaag
gtagtggtgttccggtaccagttctggttcgtgctggcggtgttgtttgtggctggctcc
actcggattagcatatttggattgggctacctcctggcgtgcttctacttcctgctgttt
ggtacccagctgatccagaagcctgccaagtctagactggctctctgggattgtctcatc
atctataacgtggccgtcatcatctccaaaaacatgctctctctcctggcctgtgtgttt
gtggagcagatgcagaatcgcttctgctggctcatccagctcttcagcctggtgtgcact
gttaagggctattataacccgaaggagttgcgggatgacaataaggactgctttctgccg
gtggaggaagccgggatcatctgggacagcatctgctgcttcttcctcctgctgcagagg
agggtcttcctcagtcactacttcctgcatgttgtggcggaccagagggcctctgcacag
caggcttccagggggtttaagctgttcaaggccagcattgtgaaaagcatgaacatccac
caggaggcagagaagaagtcccttgcacagctcaagagacaaatggagcgcattcgatcc
aagcaaaaaaaatacaaagaggggcgtcgctcttcggagaccaaggaagaggctgagtca
atcgagcgaggtgccaacagaaagacatccaagcagaaaaagaagtggtggcggccctgg
caagatcatgccacagtcttgcactcaggggaatattacctctttgagtcggacagtgag
gaagaggaggagctgcagggggaagagcagaaacctccacggcaaagcgctttccagcta
gcatatcaggcatgggtgatgaacgccaagtcagcattgaacgacagacagcagcaccag
agggtactgcacagacaggagaaggagaaagccaggcagggcagccctcggctcccagtc
atgggagatgagtgcgaggctgacaccacggacctgtctgtgcaagatgaggagctagaa
gagggagactcgggtaagagtgacatcatgcagcgcctcctggaaatgcttaagttcctc
tgggtgctgttcctggccatggtggacggcgccacacagtggctcaataccctgacaaag
cagtatgtcaacacctctactgtactctggatcgagcgctacctgctgacgcacaaaatc
agccaggagcagaaacctggcaaagacatctcggaggaccagagattcctggacagtccg
accgaggagaccgcctcccagaggttgggtctggaggagctggacatggagaaagacact
gaaaacatccaaaccaacagtacgagtggctgtgagctggaggagcttttgagtacagac
cataccacccccttcaccacagggtacagcacaagaaccaacagctgggagcgtattctg
gacctggaccccgagcaggaccccgatgccacccattcccggctcaggaccgccagcgag
atactcacagataggcacttcctgtttgaggagctggaggagtctcagcagttctactct
tctcagaaccgagccctcaagctgctgctcgcgctctacaacctgctagcgagcaactcc
gagatggtgtgttacttcatcattgtgctgaacaacatggtgactgcctccgtcatctcg
ctggtcctgcccatcctcatcttcctgtgggccatgctgtccatcccgcggcccagcaag
aggttctggatgactgccatagtctacaccgaggtgatggtgattgtgaagtacttgttc
cagttcggtttcttcccctggaacagctactatgacaccaagctgaatgaaggcaagcct
ttcttcctgcctcgcatcctgggcctggagaagatggataactatgtcaaatatgacctg
atccagctgctggctctcttctttcatcggtccctgctccggaggtatggtctctgggat
caggatgggcaactggcggagaagaaaaagaagacaatgactgtagagacgagtgaggaa
atggaaggaggccccttgaatccagaccccagccagaatgattcagaaggggccaaacca
ggccaggatctggttcctcctgggtcagaggaagacgaaccaggccaggatgaagaaagg
aaacctgatcagaaccaggagccacctcccagccaggacacccctgtccctccagtgaag
ggagacaaaggaagcagcctacgcttccgcaaaaaacggaaacaggccaaagagagttcc
caggagaagaagaaagccagagagaaatgcagtgagcgggcaagcaagaagctgggaaca
ctgagcgagaaagtgaagctcctcctcctcactctaatccggagtgtttacaagccagtc
catgagttcttccacaatattctccacacagagtatcgtgccgccacagacgtctacgca
ctcatgttcctgactgacgtggtcgattttgtaatagtaatctttgggtactgggctttt
ggaaagcactcagcagctgcagacatcacctccactctgtcggaagaccaggtacctgag
gcctttctggtcatgctacttatccagttcagcaccatggtcattgaccgtgccctctac
ctgcgtaagactgtgctcggaaaactcatattccaggtcctcctgcttttcggtatacac
ttctggatgttcttcatactgcctgcagtgaccgagaggatgttcagtcagaatacagtg
gctcagctttggtactttgtgaagtgtatctacttcgctctgtcagcctatcagatccgc
tgtggctaccccactcgcatcctggggaacttcctcaccaagacatacaaccacctcaac
ctgttccttttccaaggattccgtctggtgccgttcctggtggagctgcgggcagtcatg
gactgggtctggaccgacaccaccctctcgctctctgactggatgtgtgtggaagacatc
tacgccaacatcttcatcattaagtgcagccgtgagacagagaagaaatacccccagcca
aggggtcagaagaagaagaagattgtcaagtacggaatgggcgggcttattatattcttc
ctcatctgcatcatctggttcccactgctcttcatttcattggtcagatctgtcgtgggt
gtggttaaccacccaattgatgtcactgtgactatcaagctggggggatatgagcctctc
ttcaccatgagtgcacaaacgcagtcaatccaaccctacactcagcaagactatgacaag
ctaacccaggagttcaaaaccaaccctgtggcgatgcagtttatcacgctatacagctat
gaggacattgtgacggccaacatagagggcagctccgggtctgtgtggcgcatcagccct
ccgagtcggcggaagatgatggaggagcttctgaacagctcggcagacatgacgctacgc
tttacttggaattaccagagggacttgggaagaggaggcacggttgagcacaccttcgac
aggcactctattgacctgaatcctaatgaccctgtccgcaaagagctggcttctctgctg
atgggaaacgacaccaatgctgtgcgtgttcatcatatgtttccaaattacatcagggca
ccaaacggagctgaagccaaacctgtcaaacagctgtatccagatgatgaagacagttac
caggacgtgacgttaacattaatcaaggatcgcagttcagagaccaatgggctgcaggag
tggtgggatatccacattgcagactgtgaccgtgccaaagaggactgtgatgtcctgccc
atggtgatcttcagtgacaaggtcagcccccccagcctgggcttccttgctggatacggg
atcatggggctgtacttgtcggtggtgctcgtgatcggtaagtttgtgcgtgggttcttc
agtgagatctcacactccatcatgtttgaggagctaccctgtgtggaccgcatcctgaag
ctgtgcacagacatcttcctagtgcgtgagactggggagctagaactggaggaggagatg
tactccaaactcatcttcctgtatcgctcgcccgagacaatgatcaaatggacctgcgac
aaggactaa
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integrated database retrieval system
