Polyodon spathula (Mississippi paddlefish): 121326113
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Entry
121326113 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF166-like isoform X1
KO
K17044
E3 ubiquitin-protein ligase RNF166 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121326113
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121326113
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121326113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf_C2HC_14
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_6
zf-C3HC4_4
UIM
U-box
zf-rbx1
UIM_2
zf-Nse
Sina_RING
WSLR
Zn_ribbon_3
DUF7559
DZR_2
Motif
Other DBs
NCBI-GeneID:
121326113
NCBI-ProteinID:
XP_041125218
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All DBs
Position
13:37719710..37734134
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AA seq
238 aa
AA seq
DB search
MMAMFRSFVSGTQQKHSVGAAAAPGDSIESQYSCPICLEVYHKPVRIGSCGHTFCGECLQ
PCLQVPSPLCPLCRMPFDSKKVDKSSSMEKQLSSYKAPCRGCCKKVTLVKMRSHISSCTK
VQEQMANCPKFVPIVPTSQPIPSNIPNRSTFVCPYCGARHLDQLELLKHCMDNHRNDPNK
VVCPVCSAMPWGDPSYRSASFLQHLLHRHKFSYDTFVDYSIDEEAALQAALALSLSEN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgatgtttcgcagttttgtgtcggggacccagcagaagcacagcgtaggtgcc
gcagccgcccctggtgacagcatcgaaagccagtattcgtgtccaatctgcctggaggtc
tatcacaaacccgtaagaatcggcagctgcggacatactttttgcggggagtgtctacag
ccctgcctccaggtcccgtcccccctctgcccgctgtgccgcatgcctttcgactcgaag
aaggtggacaagtcctccagcatggagaagcagctgtcttcctacaaggctccctgccgg
ggctgctgtaaaaaggttaccttggtgaagatgaggtctcacatttcctcctgtacaaaa
gttcaggaacaaatggcaaactgcccaaaattcgtccccatagtgcccacctctcagccc
atccccagcaatattccaaaccgctcaacgtttgtgtgtccgtactgtggggccagacac
ctggatcagctggagctgctcaagcactgcatggacaaccatcgcaacgaccccaataaa
gtggtatgtcctgtgtgttcagccatgccctggggtgatcctagctacaggagtgcaagc
ttcctgcagcacctcctacaccggcacaagttctcttacgacacgtttgtggattacagt
attgacgaggaggcagcattgcaggcagccctcgcactctcactgtctgagaattag
DBGET
integrated database retrieval system
