Polyodon spathula (Mississippi paddlefish): 121326148
Help
Entry
121326148 CDS
T07273
Symbol
fhod1
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121326148 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121326148 (fhod1)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
121326148 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_FH3
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
121326148
NCBI-ProteinID:
XP_041125266
LinkDB
All DBs
Position
13:42239240..42296944
Genome browser
AA seq
1452 aa
AA seq
DB search
MASVVCRVQFLDDMDPFVCTNFPEPRRPPPYTLYEDISLIEQLAGVHKLLEAPLKLEDCA
LQLSPSGNYLDLDLTLSEQKDDLEQFYEDIGKGKKPVLILRTQLSVRVHAILEKLYNSHG
PELRRSLFSLKQLFQDDKDLVPEFVISEGLTCLIKVGAEADQNYQNYILRALSQIMLFVD
GMNGVINHSETLQWLYTLTGSMHRLVVKTALKLLIVFVEYTESNAQLLIQAVSTVSRQRD
TKPWSCLIEILEEKNGADVELLVFTMTLINKILAALPDQDSFYDLTDCLETQGMETVIHR
HMNNKGTDSDLKHQFTLYENALKFEDGELDRALPNMRRDRRKLAPSAEEGRKSRRTSGQN
MTEAVFASTTPSSCASPSPTLESSLPSLDRSHRTPLPSDRASSSQDSGSQSSSPSLYPDS
RSPTAASNGIILSATELQQSEGPPSTSSSHSPGPFTRGRSFVSHYVPPLGIGRRSRLSSG
QSVSGEASPTSASLALQDSSPNGSQSDLHCALPVPEKEGTTSERGIFKTEEVCSVNMDKP
VLRKFENRFLQSLAATQREKEKKRFSLSKGRLETLSSEEVSSSPDIVVTTPKGRNSPSSF
NEGGERLSAKEQQREAASEKEPCSASSSSSTSSTLEREDKRGDRQAAHNDPGQSLLRQSS
LEQHSTLSSDRKFMLDMLYSRNKAGALKTPQEAEKVGQEEEGEVVHEEEKEPGEGRKPSS
KACLASRISVLEPPYEWSEESQQRPEMESMAGSVRAAKERLSEEQQQQQLRNLRAQYSID
AEVNSKNLEKTLMTPLSRDGECMWDQLETRFRQLKIKDLDFSDLLEDEDIDVLDIGVYEP
GVTNRGAVPPSPLTPLGSTGNLPPPPPPSPPYPLPQEAMGGGGPRPLERTGGPLLPPWGS
GYSTAPGSPLKTEDSTFTKKRKTVKLFWKELKQSESPRKCTFGRGTVWASLDKVTVDTAK
LEHLFESKAKELPTAKKGAEIKKQTIVVLDPKRSNAINIGMTVLPPAHIIKTAVLNFDEF
AINKEGIEKILTMVPTDEEKQRIQEAQLANPDVPLGTAEQFLLMLSSISGLTARLQLWAF
KLDYESMEKEIAEPLFDLKLGMEQLAKNKTFKNILATLLAIGNFLNCSNAKGFELSYLEK
VTEVKDTVHRQSLLYHTANFVVENFPETSDVYSEIAAITRSAKVDFSQLSESLVQLERKC
KTSWDNLKVIAKHESKPSLKNKLTEFLKDCTERIIILKVVHRRIINRFHSFLLYLGQPSH
SVRDMKVTQFCRIISEFALEYRTTRERALQQRQKRAEYRERNKTRGKMITETEKFSSAAG
PPESSPAPVSAPSSQQQQGQADEEHENMKNLLIPSAEPSGTRRSRGYYSLGRTSPFNSAV
SKEDSSSSQDDATDEIMDRLVKSVTQNPNQRPSTPKERKRSRANRKSLRRTLKSGLTPEV
VQALGLTNASEV
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtagtgtgccgagtccagttcctggacgatatggaccctttcgtttgcacc
aattttcccgagcccaggagaccgccaccttacactctgtatgaagacatttccctaatt
gagcagttggccggtgtgcataagctgctggaagctcccttaaaattggaagactgtgct
ctgcagttatctccgagtggaaactatttggatttggatttgacactttcagaacagaag
gatgacctggaacagttctatgaagatattggcaaggggaagaagcctgtgctgatcctg
cggacccagctgtctgttcgagtccatgccatactagaaaagctgtataactctcatggg
cccgagctgagacgatccctcttctctctgaagcagttatttcaggatgataaagacctg
gttccggagtttgtgatttcagaggggctgacatgtctcattaaagtcggagccgaggcg
gatcagaactaccagaattacatcctgagagctctcagtcagatcatgctcttcgtggat
ggaatgaatggtgtgattaaccacagtgagactctccagtggctttacactctcactggc
agcatgcaccgtctggttgtgaagactgctctgaagttgctcattgtgtttgtggagtac
acagagtccaatgctcagcttctcattcaggctgtcagcacggtcagcaggcagagagac
accaagccgtggtcctgtctaattgaaatactggaagagaagaatggagctgacgtggag
ctgcttgtattcacaatgacactaataaacaagatactggcagctctaccagatcaggac
tcattctacgatctcactgactgtctggaaacacaaggcatggagactgtcatccacaga
cacatgaacaacaaaggaaccgattcagacctgaagcaccagttcactttatatgagaat
gccttgaagtttgaggacggcgagctggacagggccctgcccaacatgcggagggaccgg
aggaaactggcgccgagcgctgaggaaggccggaagagcaggcgaacttctggacagaac
atgacggaggcggtgttcgcctccacaaccccgtcctcctgtgcctcccccagccccacc
ctagagagcagcctgcccagtctcgaccgttcccacaggacccccctgcccagcgacagg
gcttccagctcccaggactcgggatcccagagctcgtctccctctctatatccagactcc
aggtctcccaccgccgccagcaacggcatcattttatctgccaccgagctccagcagagc
gaagggccccccagcacatcatcttctcacagccctggtcctttcactagggggcgctca
ttcgtcagtcattatgtgccacctctgggcattgggagaaggtctagactctctagcggt
cagtcggtgtccggggaagcttctcccacctctgccagccttgccttgcaggactcctct
cccaacgggagccagtcggatctgcactgcgctctgccggtgccggagaaggagggcaca
acttctgaaagaggcattttcaagacagaggaggtttgttctgtaaatatggataaacct
gtcttaagaaagtttgaaaatcgctttttgcaaagcctcgctgccacccaaagggaaaag
gaaaagaaaaggttttcgctcagtaaagggaggctggaaactttgtcttctgaagaagtg
tcgtcatccccagacattgttgtcaccaccccaaagggtcgcaactcaccaagcagtttt
aatgaaggtggggagcgtctgagtgcgaaggagcagcagagggaggcagcaagcgagaag
gagccttgctcagcctcctcctcctcttcgaccagcagcaccctggaacgagaggacaag
agaggcgacaggcaggcggcacataatgatccaggtcaaagcctccttcggcagagcagt
ctggagcagcacagcaccctttccagcgacaggaagttcatgctcgacatgctgtactcc
aggaacaaagccggggccctgaagacaccccaggaggctgagaaggtcgggcaggaggag
gagggggaggtggtgcatgaggaggagaaggaaccaggagagggtcggaagccctccagc
aaggcctgtctggccagccgcatctctgtcctggagcccccctacgagtggagcgaggag
agccagcagagaccggagatggagagcatggcggggagcgtgagggcggctaaggagagg
ctgagcgaggagcagcagcagcagcagctcagaaacctccgagcgcagtacagcatcgac
gctgaagtcaactccaagaacctggagaagaccctcatgacccccttgtcaagggacggc
gagtgcatgtgggaccagctagagacacgcttcaggcagctgaagatcaaggacctggac
ttctcagacctgctcgaggatgaggacattgacgtcttggacattggcgtttacgaaccg
ggggttacaaacaggggcgcggtccccccttctcccctcactcctctgggcagcactggc
aacctgcctccccctccccctccctctcccccttaccccctcccccaggaggcaatgggc
gggggagggccccgccccctggagagaacggggggacctctcttgcccccctgggggtcc
ggctacagtacggcgcctggttcccccttaaagactgaggacagcaccttcaccaagaag
aggaagactgttaagctcttctggaaggagctgaaacaatctgaaagccccaggaagtgc
acgtttgggaggggcacagtctgggcctccctggacaaggtgactgtggacactgccaag
ctggagcacctgtttgagtctaaagccaaggaactccctactgctaagaaaggagctgaa
attaaaaagcagacaatagttgtgctggatcccaagagaagcaatgcaattaacattggg
atgacagtgctgccccctgctcacatcatcaagacagccgttctcaacttcgatgaattc
gcaattaacaaagaaggcattgagaaaatcctcaccatggtcccgacggacgaggagaag
cagaggatccaggaagctcagctggccaaccctgacgttcctctgggcaccgctgagcag
ttcctgctgatgctgtcctccatcagcggactgaccgccaggctgcagctctgggctttt
aaactggactacgagagcatggagaaggagattgcagaaccattgtttgatctgaagctg
ggaatggagcagcttgcaaagaataaaaccttcaaaaacattctggcaacgctgcttgca
attggaaacttcctcaattgttccaatgccaaaggctttgagctgagctacttggagaaa
gtgaccgaggttaaagacacagtgcacaggcaatccctgctctaccacaccgctaacttc
gtagtggagaacttcccagaaacatcagatgtgtattctgagatcgcagccatcacacgc
tctgctaaagtggatttcagtcagctgtcagaaagcctggttcagctggagaggaagtgc
aagacgtcctgggacaacctgaaggtgatcgccaagcatgagagcaaaccctccctgaag
aacaaactgacagagttcctgaaggactgcacagagcggatcatcatcctgaaagtggtg
caccgacgcatcatcaacaggtttcattcattcttgctgtacctcggccagccctctcac
tcggtgcgggacatgaaggtgacgcagttctgcaggatcatcagcgagtttgctttggag
tatcgcactacgcgggagagggccctgcagcagaggcagaagagggctgagtaccgagag
aggaacaagacccggggcaagatgatcacagagacggagaagttctccagtgctgctggc
cccccggagagcagcccggctcctgtgtcggctcccagctcccagcagcagcagggccag
gcagacgaggagcatgagaacatgaagaacctgctgatcccgagtgcggagcccagcggc
acccgtcggagcagaggctactacagtttaggtagaactagtccattcaattcggcagtg
tcaaaggaggacagttcgagttcacaggacgatgccactgatgaaatcatggatcgtttg
gttaagtctgttacgcaaaaccctaaccagagaccttcgacaccaaaggagaggaagagg
tcccgggcaaacaggaagtcgttgcggaggaccctgaagagtgggctgacccctgaggtg
gttcaggctctgggactgaccaatgccagcgaggtgtaa
DBGET
integrated database retrieval system
