Polyodon spathula (Mississippi paddlefish): 121326186
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Entry
121326186 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein IRX-6-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121326186
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121326186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121326186
NCBI-ProteinID:
XP_041125317
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Position
13:complement(42899794..42905496)
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AA seq
492 aa
AA seq
DB search
MLTKGAAMSFSQFGYPYNSTSQFFMSANPSTTCCDSACRSLPDGSSGTAHAAAAFCCPSY
ENRLLASTRTELKAALGLYGSSYAAASQNYANYFPYSTDPSTLYSALNPQYDIKDGAGSL
HSGIAQSAAYYPYDHSLGQYQYDRCGTIDFNGSARRKNATRETTSTLKTWLYEHRKNPYP
TKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKPGDERKDDLEKRDRDDC
DLESLDKDFKECKESDSRLSDLDDTDDEECSVLDSDCEKTLHQDQSLQRDMTAEPRKTDC
SLTNTRNHFHAFSCNKTGSSVAPGVLENAITKPSTIASNIGIVPRYYETSEKPRIWSLAH
TAAAGVILGIRNSEERTVNADCQLQERHSTVSGAHCSELRVQQEARSQSTNGHAFEALPQ
SKKVYRTSIFNQESLQLHCSSYPVLSDTCQYLSGMEGFSRNVKSDQGHTELGEECLIQQE
DKITELRPVLKR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaaggagcagcaatgtccttctctcagtttggatatccttacaacagcact
tcgcagttttttatgtctgcaaaccccagcacgacttgctgtgattcagcctgcaggtct
ctgcccgatggctcttctggtacagcccacgctgcagcagctttttgttgcccgtcttac
gagaacagattgctggctagcactcgaacggagctcaaagcagctctgggcttgtacggc
tcttcctacgcagcagccagccagaactatgctaactatttcccctatagcaccgaccca
tccactctctattcagcactgaaccctcagtacgacattaaggatggcgctggaagtttg
cattcggggattgcgcaatctgctgcctattacccctacgaccactccctggggcagtac
cagtacgacagatgtggtaccattgattttaatggttcagccaggcgcaaaaacgccact
cgggaaaccactagcacactcaaaacgtggctgtatgagcacaggaaaaacccttacccc
accaaaggggagaagatcatgctggccatcatcaccaaaatgaccctgacccaagtttcc
acctggttcgccaacgccaggaggagactgaaaaaggaaaacaaaatgacctggtcccca
aaaaacaaacctggagacgagaggaaagatgaccttgaaaagagagacagagatgactgt
gatctggaaagcctagacaaagattttaaagaatgtaaagagagtgattcgaggctgagt
gatctggatgacacagacgatgaggaatgctcagtgctggacagcgactgtgagaaaaca
cttcaccaagaccagagcctccagcgagacatgacggcggagccacggaaaacggactgc
agcttgactaatacacgcaatcatttccacgcgttttcgtgcaataagaccgggtcgtct
gtggcgccgggtgttttagaaaacgcaataactaaaccgtcaaccatagcatcaaacatt
ggcattgttcctcgttattatgaaacatcagaaaaacccagaatttggtctttagcgcat
actgcagccgccggtgttattttaggaattcgtaacagtgaagaaaggaccgtaaatgca
gactgtcagctccaagaaaggcattctacagttagtggcgcacattgtagcgaactaagg
gtacagcaagaagcaaggagccagtctaccaatgggcatgctttcgaggccctcccacag
tctaaaaaggtttatagaacttccatctttaaccaggagtctctccagttgcattgttct
tcctatcccgtgttgtccgacacgtgccaatatttgtcaggaatggaaggtttttcaaga
aatgtgaaatctgaccaaggacacacagaactcggtgaagagtgtctaatacaacaggag
gacaaaataactgaattgaggcccgtgctgaagaggtga
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