Polyodon spathula (Mississippi paddlefish): 121326214
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Entry
121326214 CDS
T07273
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121326214 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121326214 (gbf1)
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121326214 (gbf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
Motif
Other DBs
NCBI-GeneID:
121326214
NCBI-ProteinID:
XP_041125370
LinkDB
All DBs
Position
13:complement(23590181..23810096)
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AA seq
1856 aa
AA seq
DB search
MGFTMVDKNIYIVQGEICTVVSAIKRNARWSTHTPLDEEQDPLLNSFSHLKEALNNIKEL
PEMEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSHGLIDSSHDGAAEGIESMADAV
THARFVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSDL
LRKSAEHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKAYNILWKNKRVQLKMRAGGMSDS
SKWKKQKRSPRPTRHASHTGSIAGEQLGQNVGSNNLSGAVPFIEQSTPGMYTFHPGSDSG
PSSISSPTTDSGLEISSKTTSKEDLTDLDQGSSTGTTPATSPSGEQDSSRRSEPGQPEAQ
NEGPRVERTQSASVESIPEVLEDRDSLADQSDAASAHDMDYVNPRGVRFTQSTQKEGAAL
VPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVGLESAQISNYQSLLGLVKDE
LCRHLFQLLSVERLNLYAASLRVWFLLLESMREHLKFQLELYLKKLMDIIPSENPKLPYE
MKEMALEALVQLWRIPGFVTELYINYDCDYYCSSMFQELTKLLSKNAFPVSGQLYTTHLL
SLEALLTVIDSTEAHCQAKVLNNTTQQEKADTAKSAMDSTISSSTDRSNGSEGMSGGGKV
QGRLGAETLTPQPPTSGHLMADKMKLGRQCQEDGDSAEKKAPKKPHRFSSCLPDAQELSD
IKNKKKLLIAGTEQFNQKPKKGIQFLQEKGLLSSPMDNNEVARWLRENPRLDKKMIGEFV
SDRKNMELLDSFVGTFMFQGLRIDEALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGS
PFETNDAGFALAYAVIMLNTDQHNHNVRKQSVPMTLEQFKKNLKGVNGTKDFDQDMLEDI
YNAIKTDEIVMPEEQTGLVKENYMWSVLLHRGANSEGDFLHLPTGSYDHDLFTMTWGPTI
AALSYVFDKSMDETIIQKAISGFRKCAMISAHYGMSDVFDNLIISLCKFTTLSSESVETL
PTVFGSNAKAQVAAKAMFNLSHRHGDILREGWKNIMDSMLQLFRAELLPKAMVEVEDFVE
PNGKISLQREETPSNRGESAVLSFVSWLTLSGTEQSGQRGPSTENQEAKQAAVDCIKQCD
PEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVW
QTVRDHLCHLCVHATENCFLVERAVVGLLRLAIRLLRREDISSQVLLSLRLLLMMKPNVL
SRVSRDVSYGLHELLKTNAANIHSSDDWYTLFSLLECIGAGVKAPPSLQATAGPDNDTGA
QSDSELSSSHPSDVCLDRGYTSDSEIYAEHGKQSRIHRSVTDVDVASSGWLVVGRDDLDC
SKSGTAPVNQYSLTLGQDLGLHDTKSLIKCVESLSFIVRDAAHVTPENFQLCVKTIRVFV
EASLNGGYKAHEKRSKSHKYEPKLTRFRRKPREKEGVPVRRAKVSSQRLSRSHSDDEEDE
GVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAEEQCHLEAASRKIAADSRTLWSNC
WCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQTLDALEWESCFNKVLFPLLTKLL
ESISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSD
LLLEAIPESLKNMLLVMDTAGIFHNADSRTGYSDLWEITWERIDCFLPRLREELFKQTII
PEPAEPSQPPYSAPAVPAKPEEPTQPSANETDKAQSMVQPSVPPPPPPVSTPMKRSPVEV
SPAISQPPLILQPLASPLQVGHPPMSLPIILNPALIEATSPVPLLSTPRDANSEVK
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaccatggtggacaaaaatatttatattgttcaaggggagatttgtactgtt
gtgagtgccattaaaagaaacgcgagatggagcacccacactcccttggatgaagaacaa
gatccactgctgaacagttttagccacctgaaagaagcactcaacaatattaaagagctt
cctgaaatggagcccaacgtgttcctacggccctttctggaggtcatccgaagtgaagac
actacaggacccatcaccggccttgctctgacatcggtcaacaagttcctctcacacgga
ctcatagactccagtcatgatggcgcagcagaggggattgagagcatggctgatgctgtc
acacatgctcgttttgtggggacagacccagccagtgatgaggttgtcctcatgaaaatc
ttgcaggtattgagaaccctgctcctcactcctgtgggagcccacctcaccaatgaatct
gtctgtgagattatgcagtcctgcttccggatatgttttgaaatgaggctcagtgactta
ttgaggaaatctgcagagcacactctggtagacatggtacagctgcttttctcgaggttg
ccacagttcaaagaggaagccaaaagctttgttggaaccaatatgaagaaggcttacaat
atcttgtggaaaaacaaacgagtgcagttgaagatgagggccggtgggatgagcgactcc
tctaagtggaagaagcagaagcgctccccccgtcccactcgacatgcctcccacaccggc
tcgatcgccggggagcagctgggccagaacgttggcagcaataacctgtcgggtgcagtc
ccctttattgaacagtccactccaggcatgtacacgtttcaccccggctccgacagtggc
ccctcctccatctccagccccaccactgacagtggcctggagatctcttcgaagaccacc
tccaaggaggacctgacagacctggatcaggggagctccacaggcaccaccccggccacc
agcccctccggagagcaggacagcagcaggaggagtgagccaggccagccagaggctcag
aatgaaggtcccagggttgagagaactcagtccgcctcggtggagtccattcctgaggtg
ctggaggaccgagactcgctggccgatcagtcggatgctgcctcggcacatgacatggac
tatgtgaatccacggggagtgaggtttactcagtccactcagaaggaaggtgctgccctg
gttccatatggccttccctgtatccgggagctgttccgtttcctcatctccctaaccaac
cctcacgatcggcacaactctgaggtgatgatccacatgggcttgcagctgctgactgtg
ggtctggaatccgctcagatctccaactaccagtccctcctcggcctggtcaaggatgag
ctctgtcggcacctcttccagcttctgagtgtggagcgtctaaatctttatgcagcttcc
ctcagggtgtggttcctgttattggaaagcatgagagaacatctaaagtttcagcttgag
ttgtatttaaaaaaactgatggacataatcccttctgaaaatcctaagctgccgtatgaa
atgaaggagatggccctggaggcgctagtgcagctctggaggatccctggctttgtcact
gagctctacatcaactatgactgtgactactactgctccagcatgttccaggagctcacc
aagctgctgtccaagaatgcatttccagtctccgggcagctctacaccacccatcttctg
tcactggaagctttattaactgtgattgacagcacggaggcgcattgccaggctaaagtc
ttgaacaacaccacccagcaggagaaagcagacacggccaaatctgccatggatagtact
ataagcagcagcacagacagatccaatggcagtgaagggatgtcaggtggtggcaaggtg
caggggcgtttgggagcagagacgctgacacctcagcctcccaccagtgggcacttaatg
gctgataaaatgaagctgggaagacagtgtcaagaagacggtgattcagctgagaaaaag
gctcccaagaaaccccaccggttctcatcctgcttaccggatgctcaggagctttcagac
atcaaaaacaaaaagaagctcctgattgcaggcacagagcagttcaaccagaagcctaag
aaaggaatccagttccttcaggagaaaggactactcagcagccccatggacaacaatgag
gtggctcggtggctgcgagagaacccccgtctggataagaaaatgatcggagagtttgtg
agcgaccgcaaaaacatggagcttctggacagctttgtcgggaccttcatgttccaaggc
ctaagaatcgatgaagccttgcgcttgtatctagaagccttcaggctccctggggaagcc
cctgtcatccaaaggctgcttgaaacctttactgacaactggcataaagtgaatggatct
ccttttgaaacaaatgatgctggatttgctctggcctacgctgtgatcatgctcaacact
gaccagcacaaccacaacgtgcgcaagcagagtgtgccaatgacactggagcaatttaaa
aagaacctgaagggtgttaacgggacgaaagactttgatcaggatatgttggaagacatc
tacaatgccatcaagactgacgagattgtgatgccagaggaacagaccggcctggtgaag
gaaaattacatgtggagtgtgctgctgcaccgtggagccaactccgagggggacttcctc
cacctgccgacaggcagttatgaccatgacctgttcactatgacctggggccccaccatt
gctgcgctctcctatgtctttgacaagagcatggacgagaccatcatccagaaagcaatc
tctgggttcaggaaatgtgcgatgatctctgcccactacggaatgagtgatgtgtttgac
aatttaataatttccctctgcaagtttacaacactcagcagtgagtctgttgagactctg
cccactgtctttggaagcaacgccaaggctcaggttgctgccaaggccatgtttaatttg
tcccatcgccatggcgacatcttgagggaaggctggaagaacattatggactccatgctg
cagctgttccgtgctgagctgctccctaaagccatggttgaggttgaggactttgtggaa
cccaatggaaaaatctcactgcagcgtgaagaaactccttcaaatcgaggcgagtctgca
gtattgagttttgtgagctggctcactctgagtggtactgagcagtctggacagaggggc
ccatccactgagaaccaggaggctaaacaagcagctgtcgactgtataaagcaatgtgat
cctgagaagctgataacagagagtaaattccttcagctggaatcactacaggaactaatg
aaggcactgatctctgtgaccccggatgaggaaacctacgatgaggaagatgccgctttc
tgcctggagatgctgctccggattgtgctggagaatagggaccgtgtttcctgtgtgtgg
cagacagtccgggatcacctgtgtcacctctgtgtccacgccaccgagaactgcttcctt
gtggagcgggctgtggtggggctgctgaggctggcaatacgcctactgcgaagggaagac
atcagctcacaggtcctcctctccctcaggctgctgctcatgatgaagccgaatgtcctg
tcccgagtgagcagggatgtttcttacgggcttcatgaactcctgaagaccaacgcggcc
aacatccactccagtgatgactggtacaccctcttctccctgctggagtgcattggggcc
ggagtgaaagccccaccctccctgcaagccaccgcagggccagataatgacacaggtgct
cagtcagacagtgagctctcctcctcccaccccagtgatgtctgcctggaccggggatac
acctcggactctgagatctacgcggagcacgggaagcagtccaggattcaccgctccgtc
actgatgtggatgtggctagcagtggctggttagtggttgggagggatgatctcgactgc
agcaagtccggcactgctcccgttaaccagtacagcctgactctggggcaggacctgggg
ctgcatgacaccaagtccctcatcaagtgcgttgagtccctatccttcatcgtgagggac
gctgcacacgtcacacctgagaacttccagctgtgtgtcaaaaccatccgtgtctttgta
gaagccagcctcaatggaggctataaagcccatgaaaagaggtccaagagccacaagtac
gagccgaaattgacgcggttccggcggaagccgagggagaaggaaggggtgcctgttcgg
agagcgaaggtgtcgagccagcggctatcccggtcacacagtgacgatgaggaggatgag
ggcgtccccgccagctaccacacggtgtcattacaggttagtcaggatctgctcgatctg
atgcacacgttgcacacacgtgctgccagcatctacagctcctgggcggaggagcagtgc
cacctagaggcagccagcaggaagatcgcagctgactccagaacactgtggtcaaactgc
tggtgtcctttactgcaaggtatcgcatggctgtgttgtgatgccaggcggcaggtgaga
atgcaggctctgacctacttgcagagggcgctattggttcacgatcttcaaacactggat
gccctggagtgggagtcctgcttcaacaaggtgctgttcccgctgctgaccaaactgttg
gagagcatcagccctgctgacgtggggggcatggaggagaccagaatgagagcctgcaca
ttgctgtcaaaggttttcctccagcacctgtctcccttgttatctctgcccaccttcgct
gcactgtggctcacaatcctggacttcatggacaagtacatgcatgccggctccagcgac
ctgctgttggaggcgattcccgagtccctgaagaacatgctgctggtgatggacacggca
gggattttccacaatgccgattcccgcacagggtattccgatctctgggagatcacctgg
gaacggatcgactgcttcctgccaagactgagagaagagctcttcaagcagaccataatc
ccagagcctgcagagccctcgcagcccccatacagtgcccctgcagtgccagccaagccc
gaggagcccacccagcccagtgccaacgagactgataaagcacagtccatggtgcagccc
agtgttcctcctcctcctcctcctgtctctaccccgatgaagaggagccctgtggaagtg
tctccagctataagtcagccccccctgatcctgcagcccctggcctcccccctgcaggtg
gggcacccgcccatgtctctgcccatcatcctgaaccccgcacttatcgaagccacctcc
cctgttcccctgctctccaccccacgggatgccaactcagaggtcaaatag
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integrated database retrieval system
