Polyodon spathula (Mississippi paddlefish): 121326286
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Entry
121326286 CDS
T07273
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121326286
NCBI-ProteinID:
XP_041125465
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Position
13:complement(1818641..1827115)
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AA seq
578 aa
AA seq
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MSSTLGKDSKEKDLKGPSGKEREKEVKALGSFSKDGKETKTKGKDAKEGKKDSSGAPPGV
AFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREETSTRLDLSKRSIHMLPTSVKELTQ
LTELYLYSNKLQSLPAEVGCLAGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREI
PPVVYRLPSLTTLYLRFNRITTVEMDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLD
VAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPKSLA
KCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEH
NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGL
VSLEVLTLSNNLLRKLPHGVGNLRKLRELDLEENKLETLPNEIAYLKDLQKLVLTNNQLT
TLPRGIGHLINLTHLGLGENLIQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLS
IMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacattaggcaaagactcgaaagaaaaggacctcaaaggtccttcgggaaag
gaaagggaaaaggaggtcaaagccttgggcagctttagtaaagacggcaaggaaaccaag
accaaagggaaagatgccaaagaaggaaagaaggactctagtggggcgcctcctggggtg
gccttttctgtagataacacaataaaacggccaaacccagcagcaggtacccgcaaaaaa
tccagcaatgctgaggtgatcaaagagctgaataagtgcagggaggagacctccacacgg
ctggacttgtccaagaggtctatacacatgctccctacgtcagtcaaggagctgacacag
ctgacggaactgtacctgtacagcaacaagctgcagagcctgcccgctgaagtaggctgc
ctggcaggcttagtgacgttagccctgagtgagaactctctcaccagcttgcccgactcg
ctggacagcttgaagaaactaagaatgctagatctccggcataacaaactgcgagagatc
ccgccagtggtctaccggcttccctccctcaccaccctgtatttgcgatttaaccgtatc
actactgtggagatggatatcaaaaacctgtcaaaactcaccatgctgagcatccgtgag
aacaagattaaacagctccctgctgaaataggggaattgtgtaacctcattacgctggat
gtagcacacaatcagctcgaacaccttccgaaagagattggaaattgcatacagataact
aatcttgatttgcagcacaatgagcttctggacctccctgaaactataggtaacttatca
agtctaaatcgcttgggtctgcggtacaacaggctgtcggctatccctaaatcattagca
aagtgcagagaattggaagagctaaaccttgagaacaataatatctctgtgctaccagag
ggtctcctgtctagcctggtcaatttgaccagtttaacactggccagaaactgcttccag
tcatatcctgtaggcggcccgtcacagttttctactatatattccctcaacatggagcac
aaccgcatcaacaaaatcccctttggcatcttctccagagccaaagtgttaagtaagctg
aacatgaaggacaatcagctcacctctctgccacttgattttgggacctggaccagtatg
gttgagcttaacctggccacgaaccagctgactaagattcctgaggatgtgtgcggtctt
gtctcacttgaggttcttaccctgtcaaacaatctcctacggaaactgcctcatggcgta
ggtaacctacggaaattacgagagttagacttggaggaaaataagttggaaactctccca
aatgaaattgcttacctgaaagatttacagaaactggtcctgactaataatcagctgaca
actctccccagggggattggacatctcatcaacctgactcacctgggactgggagagaac
cttatacaacacctccccgaggagatcggtacactggagaatctcgaggagctctatttg
aatgataaccccaatctccacagccttccctttgagctggctctgtgcagcaagctgtca
atcatgagcattgaaaactgccccctcagccacctccctccacagattgtcgctggtggc
ccctccttcatcattcagtttctaaagatgcagggcccttaccgtgccatggtctga
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