Polyodon spathula (Mississippi paddlefish): 121326572
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Entry
121326572 CDS
T07273
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121326572 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121326572 (aire)
04121 Ubiquitin system [BR:
pspa04121
]
121326572 (aire)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
121326572 (aire)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121326572 (aire)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
SAND
zf-HC5HC2H
PHD-1st_NSD
zf-HC5HC2H_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
121326572
NCBI-ProteinID:
XP_041125845
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All DBs
Position
14:24769074..24800612
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AA seq
530 aa
AA seq
DB search
MSSKLKVMCTIERPGEPDLRTLLRMSRTEIAMAIDDPFPLLYGLTDHDIITDQLFKETLD
YKKREGIHKAIYSVLTWLLGKEFPTIQDFWRTLFKEYNLERYPKLQSIQASFPKDLSMSS
LKRSRKTQRSPNPPQLPRAPPAKRRPPEEVEPALPSSQSKNTTNPGTLVKAKSIRKADGP
EVSRMPVGNGIQAVATSTSVQRAVTLSSSELPGTRGAVEGILIKQVFESGSSKKCIQVGS
EFYSPSKFEDLTGRKQTKTAKSHIRQKGVPSARTTEVLKNDDECAVCKDGGELICCDGCP
KAFHLYCLVPPLTVIPSGTWRCQSCSVKRVESPQATDRTFTPGPNPLSVPKGAGVTESAS
STVDISFFSSLTSTSLSSVTATKTSQTTGAAAQQWSTPEFGGPGERCGVCRQGGELSRCS
QCLQHFHIRCYFPSTSTADGASIEKLRCKSCSRNWWNGSETDSRQLSTTTGGAQVAFAGN
TAEQSTSLSEQILNKDEFDTLLGESSIDGILQWAFQNISRPLSESQGYFQ
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaaactgaaggtgatgtgcaccatagagcggccgggggagcctgacctgcgc
accctgctcagaatgtcacgcaccgaaatcgccatggcgattgacgacccatttccacta
ctctacggcctcactgatcatgacatcatcacagaccagctctttaaggagactttggat
tataagaagcgggaggggatccacaaagccatctactcggtgctcacatggctactggga
aaggaattccccaccatccaggacttctggaggaccttgtttaaggagtacaacctggag
cgataccccaaactgcagagcatccaagccagcttccccaaagatttgagcatgagcagc
ctgaagcgaagccggaagacccagaggagccccaaccccccccagctacctcgagccccc
ccagcaaagaggagacccccggaagaggtggagccagccctgcccagcagccaatccaag
aataccaccaatccaggaaccctggtgaaggcaaaatctatacggaaagctgatggcccg
gaggtgtctcgaatgccagtaggaaatgggatccaggctgttgccacctccacctccgtg
cagagagctgtcaccctgtcatccagcgagctgccagggacccgtggggccgttgagggc
atcctcattaagcaggtctttgagtcagggagctccaagaagtgcattcaagttggcagc
gagttttactccccaagcaagtttgaggacctgactgggaggaaacagaccaagactgca
aagtcacatattcgccaaaagggggtgccatctgccaggacaactgaggtcctgaagaac
gatgatgaatgtgctgtttgtaaggacgggggggagctcatctgctgtgacggctgtccc
aaagctttccacctgtactgtctggtgcctccgcttacagtcatccccagtgggacgtgg
cgctgccagtcctgcagtgtgaagagagtggagagcccacaggccacagacaggaccttt
actccaggcccgaacccactatctgttccgaagggtgctggagtgacagagagtgccagc
tctactgtggatatctccttcttctcctctctcacctccacctccctgtccagtgtcacg
gcaaccaagaccagccagaccacaggggcagctgcccagcagtggagcacccctgagttt
gggggtcctggggagaggtgtggggtgtgcagacagggaggagagctcagccgctgctct
cagtgcctccagcacttccacatccgctgctacttcccttccaccagcactgcagacgga
gccagcatcgagaagctgaggtgcaagtcctgcagtcggaactggtggaacggctcagag
acagacagcagacagctgtccaccactactgggggggcccaggtggcatttgctgggaac
acagctgagcagagtacctctctctctgagcaaatcttgaataaggatgaatttgacacc
ctgctgggagagagctccattgacggaatcctgcagtgggcctttcagaacatctcccgc
cccctctctgagagccaaggttatttccagtaa
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integrated database retrieval system
