Polyodon spathula (Mississippi paddlefish): 121326616
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Entry
121326616 CDS
T07273
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121326616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121326616
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Serotonin (5-HT3)
121326616
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF569
Motif
Other DBs
NCBI-GeneID:
121326616
NCBI-ProteinID:
XP_041125876
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All DBs
Position
14:39051310..39057472
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AA seq
681 aa
AA seq
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MAAWNLPRPAAAAALSIRLRRKAILAQVFIVALGLLLQGEADAALTLNCSNPNAESLLKA
LEMSVFQRKAIRPVVSLRSPTQVNVSFTLYAILGVDEKIQTMTTFIWQVLEWNMEIVEWD
PVQCGTDNISIPSENIWVPDILINEFMDEDRSPKTPYLYLKHNGNVYYDMPVRVVSSCTM
DIFTFPFDVQNCSLSFGSYLHTENDVRVSLGMTAEKTLQTSKALMKTKGEWELVNIEARG
SFLSTIDLEYDEVVYQLIIRRRPKLRHAVFVIVSPVSLQLIIRRRPKLRHAVFVIVSPVS
LQLIIRRRPKLRHAVFVIVSPVSLQLIIRRRPKLRHAVFVIVSPVSLQLIIRRRPKLRHA
VFVIVSPVSLQLIIRRRPKLRHAVFVIVIVSPVSLQLIIRRRPKLRHAVFVIVSPVSLQL
IIRRRPKLRHAVFVIVSPVSLQLIIRRRPKLYVMNLIVPSTFLMMIDLCSFLLPAQNVDR
ASFKMTLILGYTVFLLIMNDLLPSSAETPLISSYFAISLSLMVASVLETVAITNILYSSR
QYPEVPHWVRKLILQCMARVVCYSPKLTHWPDTSKNTVSLNHAFQGAVHEVKDPREVDLQ
GKQADLQGKQAELQLQKISEDLQCIRQYLDSHFHKGENEEVWMEIGHILDRFLFGLYLFF
LMVSSIVFIIIWATWQTASTD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatggaacctgcccagaccagcagctgctgctgcgctttccatcaggctcagg
agaaaggcaatcctggcacaggtcttcatagtggcccttgggctgctcctacaaggggag
gctgatgcggctttgactctgaattgctcaaacccgaatgcagaatcgctccttaaggca
ctggagatgagcgtcttccagagaaaagctattcgtcccgttgtgagccttcggagcccg
acacaggtcaacgtgtccttcactctctatgccatcctgggagtggatgaaaagatacaa
acaatgacaaccttcatctggcaagtcctggaatggaacatggagattgttgaatgggat
cctgtgcagtgtggcactgacaatatctccatcccaagtgaaaatatctgggtgccggat
atcctgatcaatgaattcatggatgaagacagatcacccaagactccatacctgtacctg
aaacacaatggcaatgtgtactacgacatgcctgtccgagtggtcagctcctgcaccatg
gacatcttcaccttccctttcgacgtgcagaactgctcgctcagctttgggtcctacctg
catacagagaatgatgtgcgtgtgagtctgggcatgacagctgaaaagacattgcagaca
tcgaaagccttgatgaaaaccaaaggggagtgggagctggtaaacattgaagctcgtggc
agcttcctcagcaccatcgacctcgaatatgatgaggttgtctatcaactgatcatcagg
aggagacccaagctcaggcatgctgtttttgtgatagtgtcccctgtttctctgcagctg
atcatcaggaggagacccaagctcaggcatgctgtttttgtgatagtgtcccctgtttct
ctgcagctgatcatcaggaggagacccaagctcaggcatgctgtttttgtgatagtgtcc
cctgtttctctgcagctgatcatcaggaggagacccaagctcaggcatgctgtttttgtg
atagtgtcccctgtttctctgcagctgatcatcaggaggagacccaagctcaggcatgct
gtttttgtgatagtgtcccctgtttctctgcagctgatcatcaggaggagacccaagctc
aggcatgctgtttttgtgatagtgatagtgtcccctgtttctctgcagctgatcatcagg
aggagacccaagctcaggcatgctgtttttgtgatagtgtcccctgtttctctgcagctg
atcatcaggaggagacccaagctcaggcatgctgtttttgtgatagtgtcccctgtttct
ctgcagctgatcatcaggaggagacccaagctctatgtgatgaacctcatagttcccagc
accttcctcatgatgatcgacctctgcagcttcttactgccagcacagaatgtggacaga
gcctccttcaagatgaccctgatcctgggctacactgtcttcctgctcatcatgaacgac
ctgctccccagctctgctgaaacgcctcttatcagttcctactttgccatcagcctctca
ctgatggtggccagtgtcctggagacggtggccatcaccaacatcctgtacagctccagg
cagtacccagaagtcccgcactgggtgcgcaagctcatcctgcagtgcatggcccgtgtg
gtctgctactcgccaaagctgacccactggccagacacgagcaagaacactgtatccctg
aatcatgcttttcaaggcgctgttcatgaagtaaaagaccccagggaggtggatctgcag
ggcaagcaggctgatctgcagggcaagcaggctgagctgcagctgcagaagatcagcgag
gacctgcagtgcatcaggcagtacctggacagccacttccataagggcgagaacgaggaa
gtctggatggaaatcgggcacatcctggaccgcttcctttttgggctttacctgttcttt
ttaatggtctcctccatcgtcttcattattatctgggctacgtggcagacagcctccact
gactga
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