KEGG   Polyodon spathula (Mississippi paddlefish): 121326663
Entry
121326663         CDS       T07273                                 
Name
(RefSeq) laminin subunit gamma-1-like
  KO
K05635  laminin, gamma 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510  Focal adhesion
pspa04512  ECM-receptor interaction
pspa04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121326663
   04518 Integrin signaling
    121326663
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121326663
SSDB
Motif
Pfam: Laminin_N EGF_laminin Laminin_B EGF_LMN_ATRN DUF6061
Other DBs
NCBI-GeneID: 121326663
NCBI-ProteinID: XP_041125945
LinkDB
Position
14:complement(12175011..12235231)
AA seq 1594 aa
MHWLTRIVSALTCLAACSYGAMDECVDDSNRPQRCMPEFVNAAFNVTVVATNTCGQPQEE
YCVQTGVTGVTKSCHVCDARDPRLHHSAVYLTDYNNQADTTWWQSQTMIAGVQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWVPYQYYSGSCEKTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDSSPILQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECLKNEYEKMVCNCKHNTFGVD
CEKCLPFFNDRPWRRATAENPNECLPCNCNDKSRECYYDSELYRATGHGGHCLNCDDNTD
GPNCERCRDNYYRLGANGRCLPCICNPVGSLSTQCDNYGRCSCKPGVIGDKCDRCQSGYH
SLTEAGCRPCQCNPAGSTQECDVQTGRCQCKENVEGFNCDRCKLGYFHLDPVNPRGCTAC
FCFTHSAVCDSGDGYSINTITATFDRDAEGWRGEQRDGTEALVQWSPNSREISLISEDYF
PIYFVAPEKFLGNQMLSYGQNISFSFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PSENKQTYVFRLHDATDYPWRPSLSHADFQKLLHNLTAVKIRGTYSEKSAGYLDDVTLTT
ARHGPGTPARWVEKCTCPTGYLGQFCEQCAPGYKRANPSLGSFSSCEPCNCHGHSDTCDP
ESGNCYCRDHTDGLNCERCEDGYYGDSTTGNPTDCKPCPCPGRSSCAVVPKTREVVCTNC
PTGTTGKRCELCDDGYFGDPLGENGPIRACRACQCNNNIDPNAVGNCDRQTGECLKCTYN
TAGFYCDRCNDGFFGNALNTDTADKCKPCSCSPYGTVDRQTTCSQVTGQCECLPHVTNRD
CGACQPGFYNLLSRQGCERCDCNAIGSTNGQCDIHSGQCECQPGITGQQCERCEVNHFGF
GPEGCKPCDCDPEGSGTLQCKQDGRCECREGFVGNRCDMCEENYFYNRSRPGCQECPACY
SLVKEKVNQQRQKLRELENLIENLGSSQETVSDKAFEVRLKDAEKAIMDLLQDAQNNKDV
DKGLLDRLGEINNTLTTQYGRLQNINSTVESTGALADRSRDRVREAENLIDNARRELEKA
KDAILKVDIKPPTSSGDPNNMTLLAEEARKLADKHKKEADEIEKTAKSANDTSTEAYNLL
LKTLAGEGQTSKDIDDLNKKYSEAKSIAKDLENQANKVHAEAEEAGNKALQIYANLTSLP
PVDTKALENEANKIKKEAAELDSLIDRKAKDYEDLRDDLRGKEVEVQKLLDKGKTEQQTA
DQLLARADAAKALAEEAAKKGRATYQEAQDILTNLNDFDRRVNDNKTAAEDAMKKIPGIN
ATIIAANEKTKQAEAALGNAGADAKEAKKKAEEAEKIASAVQKNAAKTKSDAEQTFADTM
KLDDEVNKMMDQLKAAEDDLAKKKAEADQDMMMAGMASQAAQEAEDNARKAKNAVKNVLG
TISNLLGQLGDVDNVDLNKLKEIEESLAKAKNQMKDNELDRKLAELNTAAKQQEDMIKDY
DRQIGEIRADIDNLEDIKNTLPSGCFNTPSIETP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgcattggctaactcgaattgtaagtgcattgacttgtttggctgcgtgcagctatggt
gctatggatgaatgtgtggacgactcaaacagaccccaacgctgtatgccggagtttgtc
aacgccgctttcaatgtgactgtggtggctaccaacacttgcgggcaaccgcaagaagag
tactgcgtacaaaccggggtaacgggagtcaccaagtcctgccatgtgtgcgatgccagg
gaccctcggctacaccacagcgcagtctacctcacagattacaataaccaagcagacacc
acctggtggcaaagccagaccatgatcgctggcgtccagtaccccaattccatcaaccta
accctacaccttggcaaagcttttgacatcacgtatgtgcggctcaagttccacaccagt
cgcccagagagttttgccatctacaagcgcaccagtgaggacggcccctgggtgccctac
cagtactacagcggctcctgtgagaaaacataccagaagctaaaccgaggcttcatccgg
accggtgaggacgagcagcaggcgctctgcactgacgagttcagcgacatctctccactc
accggggggaatgtggccttctccacactcgagggacggcccagtgcctacaactttgac
agcagccccattctacaggattgggtaacagccactgatatccgggtcacgttaaacagg
ctaaacaccttcggagatgaggttttcaacgaccccaaagtcctaaaatcatattactat
gcaatctctgactttgcagtgggcggaaggtgtaagtgtaacggtcacgccagtgagtgt
ttgaagaatgagtatgagaagatggtgtgtaactgcaagcacaacacgtttggcgtggac
tgtgagaagtgtctgcctttcttcaacgaccggccatggaggagagccaccgcagagaac
cccaacgagtgcctgccatgcaactgtaacgacaagtctcgggagtgttactatgactcc
gagctgtatcgcgctacagggcacggtggacactgcttaaactgtgatgacaacactgat
ggccccaactgcgagcgctgccgagataactactaccgactgggggccaacgggcgctgt
ctgccctgtatctgcaatccagtgggatccctgagcactcagtgtgataattacgggcgc
tgcagctgcaaaccaggagtgattggtgacaagtgtgatcgctgtcagtctggataccat
tcactcacagaggccgggtgcaggccatgccagtgcaaccctgcaggaagcacgcaggag
tgtgatgttcagactggccggtgccagtgcaaagaaaatgttgagggtttcaactgtgac
agatgcaaacttggatatttccacctggacccagtgaaccccagaggctgcacggcctgt
ttctgtttcacacactctgctgtctgcgacagtggtgatggctacagcattaacacaatc
acagccacctttgatagagatgctgaaggctggcggggggaacagcgtgatggcacagag
gccctggtccagtggtcccccaacagccgtgagatctccttgatatcagaagattacttc
cctatctactttgttgcaccagagaagttcctgggaaaccagatgctgagctatgggcag
aacatttctttcagtttccgtgtggaccgacgtgacacgcgcctgtctgctgaagacgtg
gtgctggagggggcggggttgcgggttgctgtgcccctcatcgcccagggaaatgcctac
ccaagtgaaaacaagcagacctatgtcttcaggctgcacgatgccactgactatccttgg
aggccaagcctcagtcacgctgatttccagaagctgcttcacaacctgactgcagtcaag
atccgtggcacctacagtgagaaaagtgctggttacttggatgatgtcacattgacgact
gcccgtcatggtcccgggacccctgcccgctgggtggagaagtgtacctgccccactggt
tatctaggccagttctgtgagcagtgcgcccctggctacaagagggccaaccccagcctt
ggatcattcagctcctgtgagccctgtaactgccatggacacagcgacacatgtgaccca
gaatctggcaattgctactgcagagatcatacagatggcctcaactgcgagcgatgcgag
gatggttactatggagactcaaccactgggaaccctacagattgcaagccctgtccctgc
ccgggcagatccagctgtgcagtcgtcccaaagacaagagaggttgtgtgtaccaactgc
cccactggcaccacaggcaagcgatgtgagctgtgtgacgatggctactttggggacccc
ttgggtgagaatggccctatccgagcctgtagagcatgccagtgcaacaacaacattgac
cccaacgctgtgggcaactgtgaccggcagactggggagtgcctgaagtgcacctacaac
acagccggcttctactgcgaccgctgcaatgacggcttctttggcaacgcactgaacacc
gacactgccgacaagtgcaaaccgtgtagctgctctccatacggcactgtggacagacag
accacctgctcccaggtcactggccagtgcgaatgtctgcctcacgtcaccaaccgagac
tgtggtgcctgccaacccggtttctacaacctgctcagcagacagggctgtgaacgatgt
gattgtaatgccattggctccacgaacggtcagtgtgatatccacagtggtcagtgtgag
tgccagcctgggatcactggtcagcaatgtgagagatgtgaggtcaaccactttggcttc
ggaccggaaggatgcaaaccctgtgactgtgatccagagggctctgggaccctgcagtgc
aaacaggatggccgctgtgagtgcagggaaggctttgtgggaaaccgctgtgacatgtgt
gaggagaactacttctacaaccgctcacggcctggctgccaggagtgtcctgcctgctac
tcgctggtgaaggagaaggtgaaccagcagaggcagaagctgcgtgagctggagaacctg
attgaaaaccttggctccagccaggagacggtgagcgacaaggcatttgaggttaggctc
aaggacgctgagaaagccatcatggacctgctacaggatgctcagaacaacaaggatgta
gataaaggtcttcttgaccgtctgggtgaaatcaacaacaccctgaccactcagtatggc
cgtctgcagaacattaacagcacagtggagagcacaggagccctggcagacaggtcccga
gaccgtgtgcgggaagcagagaacttgattgataacgcccgtcgtgagctggagaaggcc
aaggatgccatcttgaaagtggacatcaaacctccgacctcctctggggatcccaacaat
atgaccctcttggccgaggaggcgcgcaagctagcagacaagcataagaaggaagcagat
gaaattgaaaagacagctaagagtgccaatgacacctccactgaagcctacaatctgcta
ctgaagacactggctggtgagggacagaccagcaaggacattgatgatctcaacaaaaag
tacagtgaagctaagagcattgccaaagacctagagaatcaggccaacaaggttcatgct
gaggcagaggaagctggaaacaaagcattgcagatctatgccaacctgaccagcctgcca
ccagtggacaccaaggcacttgaaaatgaggcaaacaagatcaagaaggaagctgcggaa
ctagactccctgattgacaggaaggctaaggactatgaagacctgagagatgacctccga
ggaaaggaagtggaggttcaaaagcttctggacaaagggaaaactgagcagcagaccgca
gaccagctgcttgctcgagcagatgcagccaaggcccttgctgaggaggctgctaagaaa
gggagagccacttaccaggaggcacaggacattctcaccaacctgaatgattttgacaga
cgggtgaatgacaataagactgcagcagaggatgcaatgaagaagatcccggggatcaac
gcgaccatcatcgcagccaatgagaagaccaagcaggcagaggcggcccttggcaatgct
ggggcagacgccaaggaggcaaaaaaaaaggcagaagaggctgagaagattgccagtgct
gtgcagaagaatgctgcaaagacaaagtcggatgcagagcaaacctttgctgatacgatg
aagctggatgatgaagtgaacaaaatgatggaccagctgaaggcagctgaggacgatctg
gccaagaagaaggcggaggctgaccaggacatgatgatggcaggcatggcctcccaggca
gcccaagaagctgaagataatgccagaaaagcaaagaatgcagtgaagaatgtcttgggc
accattagtaatctactcggacaactaggtgacgttgacaatgtggacctcaacaagctg
aaggagattgaggaatcactggctaaggccaagaaccaaatgaaggacaacgaactggac
cggaagctggctgagctgaacactgctgcaaagcagcaagaggacatgatcaaggactac
gaccggcagatcggggagatcagagcggacattgacaacctggaagacatcaagaacacg
ctaccttccggctgcttcaacaccccctccatagaaacaccctaa

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