KEGG   Polyodon spathula (Mississippi paddlefish): 121326760
Entry
121326760         CDS       T07273                                 
Name
(RefSeq) cullin-3
  KO
K03869  cullin 3
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120  Ubiquitin mediated proteolysis
pspa04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121326760
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    121326760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pspa04121]
    121326760
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121326760
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     121326760
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121326760
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 CUL8_C RhgB_N Stu2_CTS DUF6655
Other DBs
NCBI-GeneID: 121326760
NCBI-ProteinID: XP_041126164
LinkDB
Position
14:36146851..36164537
AA seq 767 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRVMKSRKKMQHNV
LVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtcgaacctcagcaaaggcggcaccaagaaggacaccaagatgaggatacgagccttt
cctatgacgatggacgagaagtatgtgaacagcatctgggaccttctgaaaaatgccatc
caggagatccagcggaagaataatagtgggctcagctttgaagaactttacaggaatgca
tacaccatggtgttacacaaacatggagagaaactctacacaggactcagagaagtcgtc
acagaacatctaatcaacaaagtacgagaggatgtattaaactcgttaaataataatttt
ttgcaaacattaaaccaagcttggaatgaccatcagacagctatggtgatgatcagagac
atcctgatgtacatggaccgtgtatatgtacaacagaataatgtagaaaacgtctacaat
cttgggttaatcattttcagagaccaggttgtacgttatgggtgcatcagagatcacctc
agacagacgcttttggacatgattgcacgagagaggaaaggcgaggttgtagacagggga
gcaatccgaaatgcttgccagatgttaatgattctaggccttgaagggagatcagtttat
gaagaagattttgaagctccatttttagagatgtctgcagaatttttccagatggaaagt
cagaagtttttagctgaaaacagtgcaagtgtgtacattaagaaagtagaggctagaatc
aatgaagaaattgaacgggtgatgcactgcttggacaaatcaacagaagaacccattgta
aaagtagttgagagggaactcatttccaagcacatgaagaccattgtggaaatggagaac
tctggtcttgtgcatatgctgaaaaacggaaagacagaagatttggcctgtatgtacaag
ctatttagcagagtgccaaatggcctgaagacgatgtgtgagtgcatgagttcatacctg
cgggagcaggggaaagcactggtgtctgaagaaggagaaggcaagaaccctgtggattat
attcagggtcttctggacctgaagagccggtttgatcgtttcctgcaagaatccttcaat
aatgatcggctcttcaaacagaccattgctggagactttgagtacttcctgaatctcaac
tccaggtcaccagagtatctctcattatttattgatgataagctgaaaaaaggtgtgaag
ggtctgacagaacaggaggtggagacaatccttgacaaagcaatggttttgtttaggttc
atgcaggaaaaagacgtgtttgaacggtattataaacagcacttagccagaagacttctc
accaacaaaagtgtgtctgatgattcagagaaaaacatgatatcaaaattgaagaccgag
tgcggctgtcagttcacatccaaactggaaggaatgttcagggacatgagcatctcaaat
acaacaatggatgagtttagacaacatttgcagtccacaggggtttctttaggtggagtt
gatttaacagtaagagtactaactacaggttactggcccacacagtccgccacaccaaaa
tgcaacatccctccggctcccagacatgcatttgaagtatttagaaggttttacttggcc
aaacacagtggtcgacagcttacactccaacaccatatgggttctgcagatttaaacgcc
actttttatggtcctattaaaaaggaagacggttctgaagttggagtaggaggagcacaa
gtaactggctctaataccagaaagcacatattgcaagtttcaacgtttcagatgacaata
ttaatgctcttcaacaatagagataaatacacatttgaggaaattcaacaggagacggat
attccagaacgagagcttgttagagctcttcagtcgctggcatgtggcaaaccaacacag
cgggttcttactaaagaaccaaaatctaaagaaattgagaatgggcatgtatttacagta
aacgaccagttcacttccaaattgcacagagtgaagattcaaacagttgctgccaaacaa
ggagagtcggatccagagagaaaagaaacgcggcaaaaagtagatgacgaccggaaacat
gaaattgaagctgccattgtacgcgtcatgaaatctagaaagaagatgcagcataatgtg
cttgtagcagaggtgactcaacagctgaaggctcgtttcttaccaagtccagttgttatt
aaaaaacgaattgaaggacttattgagagagaatatttggcacgaacacctgaggatcgc
aaagtatatacttatgtagcataa

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