Polyodon spathula (Mississippi paddlefish): 121326774
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Entry
121326774 CDS
T07273
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00061
Fatty acid biosynthesis
pspa00071
Fatty acid degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
pspa04216
Ferroptosis
pspa04920
Adipocytokine signaling pathway
Module
pspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121326774
00071 Fatty acid degradation
121326774
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121326774
09143 Cell growth and death
04216 Ferroptosis
121326774
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121326774
03320 PPAR signaling pathway
121326774
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121326774
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121326774
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121326774
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121326774
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121326774
Exosomal proteins of breast cancer cells
121326774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121326774
NCBI-ProteinID:
XP_041126191
LinkDB
All DBs
Position
14:complement(36267747..36291009)
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AA seq
710 aa
AA seq
DB search
MKLKEDLNPFLLQVLHSIIWVYSAVTFLPWYFLSGGSQNLSRAKRVKARPVNSTPGSPYR
SVNSVHCLASVLYPGCDTLDKVFEFAKHRFKERDCLGTRELISEEDEIQPNGKVFKKVIL
GRYNWLTYAETYLAAAHFGSGLAALGQKPKSNIAIFCETRAEWIIAAQACFMYNFPVVTL
YSTLGGPAIAHGLNETEVTHIITSKDLQSRLKAIVLQVPRLQHIIIVDDKPTAWADFPRG
VTVHSMATVQALGAKKQNMSKPPNQPVTSDIAVIMYTSGSTGIPKGVMISHSNLIAGITG
MAERIPNLGREQDTYIGYLPLAHVLELSAELVCVSHGCRIGYSSPQTLADQSTKIKKGSK
GDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMNRVQRTLFVLAYNYKMEQISKGYSTPLC
DSFVFRKVRSLLGGKTRVLLSGGAPLSAATQRFMNICFCCPVLQGYGLTETCGAGTISEM
SDYSTGRVGAPLVCCEIKLKNWEEGGYYCTNKPNPRGEILIGGPNVAMGYYKNDLRNKDF
FVDENGQRWFCTGDIGEFHPDGCLKIVDRKKDLVKLQVGEYVSLGKVEAVLKNCSLIDNI
CAYANSDQSYVIGFVVPNQKQLLALAELKKIRGTWEEICNNSEIEKEVIRVMAEAAVGGK
LEKFEIPVKVRLSAEPWTPETGLVTDAFKLKRKALKTHYQDDIERMCGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaaggaagatctcaacccttttcttttacaagtattgcactcgataatatgg
gtgtactctgctgtaacttttctgccatggtactttctgtctggagggagtcagaacctt
tcacgggccaagcgagttaaagcgagacctgtgaatagcacccctgggagcccctaccgc
tctgtgaacagtgtgcactgccttgcctcagtgctgtacccgggctgcgacaccctggac
aaagtctttgaatttgccaagcacagatttaaggaaagggactgtcttggaactcgggag
ctgatcagtgaggaagacgagatccagccaaatgggaaagttttcaaaaaggtaatcctt
ggcaggtataactggctgacgtatgcggagacctatcttgctgctgcccactttgggagt
ggtctggcagcgctggggcaaaagccaaagtctaatattgccatcttttgtgagacaaga
gctgagtggataattgctgcacaggcctgtttcatgtacaacttccctgttgttaccttg
tattcaaccctgggaggaccagctattgcacatggattaaatgaaactgaggtcactcac
ataatcaccagtaaagatcttcaaagcagactgaaggcaatcgtgctccaggttccaagg
ttacagcacatcataattgttgatgataagccgactgcatgggcagactttccaagaggc
gtaactgttcacagtatggcaacggtgcaagcactcggggccaaaaaacaaaacatgtcc
aagcctccaaaccagcctgtaacttcagatattgcagtcatcatgtacactagtggatcc
acagggataccaaagggagtgatgatttctcacagcaatctcattgctggcataaccgga
atggctgaaaggattcctaaccttggcagggagcaggacacttacattggatacctgcca
ttggcccatgtgctagagctcagtgctgagctggtctgtgtatctcacggatgccgtatc
ggctattcatcaccacagactttagcagatcagtcaaccaaaatcaaaaaaggaagcaaa
ggagatacaagcgtattgaagcccaccctgatggcagctgtaccagaaattatggatcgc
atctacaagaacgttatgacaaaagtggaagagatgaacagggtacagagaaccctcttt
gttctagcttacaattacaaaatggagcagatttccaaaggctacagcaccccactgtgt
gacagttttgttttccgaaaggtgagatctttacttggtggaaagacccgtgtgcttttg
tctggtggggcccctctgtcagcagctacccagcgattcatgaatatctgtttttgctgc
ccggtgctgcaaggatatgggctcacagagacttgtggagcaggaacaattagtgaaatg
tcggactacagtaccggtcgtgtaggagctcccttggtgtgctgtgagatcaaattgaag
aactgggaagaaggtggctattactgcactaacaaacctaaccccaggggggagattctg
attggtggtccaaatgtcgccatgggatactacaaaaacgatttgagaaacaaagatttc
tttgtggatgaaaatggccaaagatggttttgcacaggagacattggagagtttcacccc
gatggatgccttaaaattgtcgaccgtaagaaggatctggtaaaacttcaagtaggagaa
tatgtgtctctaggaaaggttgaagcggttttgaaaaactgttcattaatagacaacatc
tgtgcatacgcaaacagtgatcaatcctacgtgattggcttcgttgtacccaatcagaag
cagcttctagcccttgcagaactcaagaagatccgtggaacctgggaggagatttgcaac
aactctgagattgagaaggaggtgataagggtgatggcagaagctgctgttggaggcaaa
ttggagaagtttgaaattccagtgaaagtccgtctgagtgcagagccttggaccccagag
accggtctggtcacagacgccttcaagctgaaaaggaaggcgctcaagactcactaccag
gatgacattgagagaatgtgtggaggaaagtaa
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