Polyodon spathula (Mississippi paddlefish): 121326826
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Entry
121326826 CDS
T07273
Symbol
phc3
Name
(RefSeq) polyhomeotic-like protein 3 isoform X1
KO
K11458
polyhomeotic-like protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121326826 (phc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121326826 (phc3)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121326826 (phc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121326826
NCBI-ProteinID:
XP_041126311
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All DBs
Position
14:complement(28202445..28231193)
Genome browser
AA seq
1006 aa
AA seq
DB search
MIIPGSWVQGTAFTQRKKQKLEMENETSTPTSATTTTSSTPSRTQAPQLSLYSSTTTERQ
AVQVIQQAIHRPPSMAAQYLQQMYAAQQQHLMLQTAALQQQQHLSSFAAVQQATLSGGRQ
SSSPTASVTQQSSVSQTSINLSSSPVAQLISRSQTSSAAGSGGGGALGQQSMLLGNSSPT
LTTSQAQMYLRAQMLILTPTATVAAVQPDIPVVSATSSSHTPATQVQNLTLRPHQPSALA
SPQSVPLKATSQGQPLAVAHPKMSVCPLKPNQQPEPLLEGNKKGEDPITEPKPTTHTRQP
GAHQLIAPAPYPLIKHQHIHAAQPQKGPTHQLIIQQQPPPPQRQVQPIALQVSRQETSPL
SLAIQTQVPPPTTVSIESQHCTPITATALPLTSSPGQLQAVQQQTVVVSPPPTQSPTSQS
PTTVIQPQALIQSQPHALVSTPLQLGPAQSPILSTAQVIQPHLPPVTSPIAHIGPLPYTT
LISPSINFPPQPPHQQQPPAPQASLGPVSSPPSPPPQLSHSPPAQLQPLPLQSVQASEIL
PPGQMLVSEEELPAVDALVQMPYQGLPPPQTVAINLQVQHPTPMEVPVQVYQVEGMCEEE
MREDREECLPGNRTPTPPALSPPAGQVRDCEESSTQQDMSTGLPGLPCVNTSGNTSVIRS
SSDPSYINSSPPPPLSPPHPPPPPPPPPLPPTLLPAVVRSPSKPVPAGLPENKPPQAIVK
PHILTHLIEGFVIQEGLEPFPVSRSSLLTEKKGQQCEQQVMEPNSEEPQSMMETEEPEHS
TDSDMDDIIADGVMEETVTELLKCEFCGKMGYAHKFLRSKRFCSKSCAKRFNVSCTKRVS
LLKADKGVRWTRKPGGRRGRRPRGAQGGSREHFLRQLPATYPATGGMQLARSQSPQEDTV
PVAMTTRLRRQSEQGRELDLRVRHSSDNNESLPSVQSDPTQWTVSDVWAFIYALPGCQDI
AAEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKICARINTLKEP
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgataattccaggcagctgggttcaaggtacagcgttcacccagaggaagaagcagaag
ctggaaatggaaaacgagacgagtactccaacatcagccaccaccacaacctccagcacc
ccctcccggacccaggccccacagctgtctctctacagcagcaccactaccgagaggcag
gctgtccaggtgatccagcaggccatccaccggccccccagcatggcagctcagtacctg
cagcaaatgtatgctgcgcagcagcaacatctgatgctccagacagccgctttgcagcag
cagcagcacctcagcagctttgcagctgtacagcaggcgacgctgtcaggaggaaggcag
tcctcttcccccactgcgagtgtcacacagcaatcaagtgtctcacagacttcgatcaat
ctctcctcgtctccagtggcgcagctgatcagccggagtcagacctccagcgcggcgggc
agcggcggggggggtgccctcggacagcagtccatgctcctgggaaacagctcccccacc
ctgaccaccagccaggctcagatgtacctgcgtgctcagatgctcattctcactcccact
gccactgtagctgctgtccagccagatattcctgtagtttctgctacatccagctcccac
actccagctactcaggttcagaacttgaccctgcgtccacaccaacccagcgccctcgcc
tccccccagagtgtgccccttaaagccaccagccaggggcagcctctggcagtggcccac
cccaagatgtccgtgtgccctctgaagcccaaccagcagccggagcccctcttggaaggc
aacaagaagggagaggaccccatcactgaacccaagcccaccacccacacccgccagccc
ggggcccaccagctcatagcaccagccccataccctcttatcaaacaccagcatattcac
gctgctcaaccacagaaaggtccaacccaccagctaatcatccaacagcagccaccaccc
ccccagcggcaagttcagccaatcgcactccaggtctctcgtcaagagacttcgcctctc
tccctggcaatccagacccaggtccctccccccactacagtctccattgaatcgcagcac
tgcactcccatcacagccactgccctgcccctgacctcatcccctggccaattgcaggct
gtgcagcagcaaacagtcgtggtttcacctccacctactcagtcccccaccagccaatcc
cctaccacagtcattcagccccaggcacttatccaatcacagcctcatgctctggtctct
actcccttgcagttaggccctgcccagtcacccattctaagtactgcccaggtaatacag
ccccaccttcctcctgtgacttccccgatagctcacattggcccccttccttacaccact
cttatttcaccatccatcaacttccctccccagccaccacatcagcagcagcctcctgcc
cctcaggcctccctaggccccgtgtcctcaccgccttcccctccacctcagctctcccac
tctccccctgcccagctacagccactccccttgcagtctgttcaggcctcggagattctg
ccccctgggcagatgcttgtgtcagaggaggagctgccggcagtcgatgccttggtccaa
atgccctaccaggggctgccccctccccagaccgtagccattaacctgcaagtgcagcat
cccacccccatggaggttccagtgcaggtctaccaggtggaggggatgtgtgaagaggag
atgagagaagacagggaggagtgtctgcctgggaacagaactccaacacctcctgctctg
tcaccccctgctggtcaagtcagggactgcgaggagagctccactcagcaagacatgtca
acaggtctgcctggacttccgtgtgtgaacacctcaggcaacacctctgtgatcagatcc
tcctcggacccctcctacatcaacagctccccacctcctcctctttctcctccccatcct
cctcctccccctcctcctcctcctctcccccctactctcctgcctgctgtggtcaggagc
cccagcaagcctgtcccagctggcctgcctgagaacaagcctccgcaggcgattgtgaaa
ccacacatcctcacccacctcatcgagggctttgtcatccaggaggggctcgagccattc
ccggtaagtcgttcttccctcttgactgagaagaaagggcagcagtgtgagcagcaggtg
atggaacccaacagtgaggagccacagtccatgatggagactgaagagccggaacactcc
acagacagtgacatggatgacatcatcgctgacggggttatggaggaaaccgtgacagag
ctgctgaaatgcgagttctgtgggaagatgggatacgcacacaaattcctgcggtcaaaa
cgattctgctccaagtcatgtgccaaaaggttcaatgttagttgcactaaaagagtcagc
ctgctgaaagcagacaagggggtccgctggactcggaagccaggtgggcgacgagggcgc
cggccgagaggggcacaggggggctccagggagcactttctccggcagttgccagctact
tatcccgccacaggtgggatgcaactagctcgcagccagtcgcctcaagaagacacagtt
cctgttgccatgacgacacggctgcggcgacagagtgagcaggggagggagctggatctc
agagtgagacactcctcagacaataatgagagcctgccctccgtacagtccgatcctacg
cagtggacagtcagtgacgtctgggcctttatttacgctttaccaggctgccaggacatt
gctgccgagttccgtgcccaggagattgacggccaggcgctgctgcttctcaaggaagat
cacttgatgagtgccatgaatatcaaactgggcccagccctgaaaatctgtgcccgtatc
aacactctgaaggagccctaa
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