Polyodon spathula (Mississippi paddlefish): 121326829
Help
Entry
121326829 CDS
T07273
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121326829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
Ank_5
Ank_3
NOD
Ank_4
EGF_3
cEGF
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
121326829
NCBI-ProteinID:
XP_041126329
LinkDB
All DBs
Position
14:complement(16185..76351)
Genome browser
AA seq
2440 aa
AA seq
DB search
MGIPRRDVGQILLILSWVCVSEALQCRGVKEPCINDGKCIPFNNGTGYCKCAAGYLGEYC
QHKDTCLPDTCRNRGNCTAMVSGGVVRTACTCPLGFSGTICETPQPTACYPHNPCHHQGT
CRLLALDRWECVCPRGWTGKSCQHVDSCASQPCQHGGNCSALPRERFTCSCLPGYTGLTC
QTDIDECAARPAVCQNNGQCVNMPGSARCECRPGFSGKHCESVYVPCAPSPCLNGGTCRP
TSDVSYECNCLPGFNGTDCERNIDDCPQHRCQNGGTCVDGVNTYNCQCPPEWTGQFCTED
VDECRLQPNACQNGGTCSNRQGSYSCVCVNGWSGDDCSKNIDDCATAACAAGSTCIDRVA
SFVCNCPVGKTGLLCHVADACISNPCQEESMCDTNPLNGQYICTCPSGFKGAACTEDIDE
CTMNSNPCEHGGRCVNTDGSFRCDCALGYTGPRCEADVNECISMPCQNDATCLDQIGEFT
CICMPGFIGLHCEENIDECQSNPCLNSGRCTDQINRFMCDCPPGFSGVVCQVDIDECAST
PCHNGAKCIDRPNGYECDCAEGFTGLLCEGNIDDCDPEPCHHGHCQDGIATYTCVCDPGY
VGPICSEQVNECQSSPCQNEGRCIDLVNKYQCNCLPGTSGDNCENNFDECASSPCEYGIC
KDGLNRYDCVCTPGYTGPMCNIDINECASNPCHNGGTCLNELNSFRCLCPEGYRDPICYS
EVDECISSPCVHGSCMDDVNGYRCECEPGWAGMDCELDRNECESNPCVNGGTCTDLTNGY
SCTCRKGFKGSNCEININECASNPCLYQGTCIDGVSSYTCHCSLPYTGVNCEIILAPCDP
DPCTNSGICQASADYSSYSCLCAPGWQGQRCSQDINECVTNPCKNGAVCQNSQGSYLCQC
RPGYTGTNCETNIDDCTPNPCQNGGSCVDGVNSFSCSCLPGFHEAHCQTEVNECDSHPCL
NGATCNDYVNSYACQCAPGFNGIHCETNILECTDSSCLNNGTCVDGINMFSCRCRPGFVG
TVCQYEINECDSQPCQNGGTCMDRLGTYRCSCPAGYIGNNCQTLVNLCVTSLCNNGGTCV
QVGQSLRCECPGDWTGMYCDVPMVSCRVAAFRKCVSVDQVCQHSGTCINTGNTHQCQCQA
GYTGSYCELDVDECASNPCRHAARCQDLQGGYLCQCLAGYQGVSCEYEVDECQSQPCRNG
GTCFDLVNRFSCSCPPGTHGLQCEINNDDCAPDAHPSGGPRCFNGGQCIDGIGGYTCSCP
PGFAGQHCEGDVNECLSSPCDPKGSLDCVQKTNNYTCKCRHGFTGRHCETVVDLCQLNPC
QNSGACSVDLNSPLGYVCHCRLGFVGNNCEYNRCGQIRCQNKQVCVETSSGPLCRCPEGP
EGARCENVGCANRPCRNGATCLAQPQPPYYQCQCPEHFDGRDCDIYSPPSPRVPRTDCQI
PQCAHKAGDDVCDMQCNTHECGWDSGDCSLHFPSPWKLCPPELRCWELFNNDMCNEQCNT
AECFFDSYECQSRGRTCKYQDYCINHYADRHCDQGCNTEECGWDGLDCSEDAPQRLEATL
VIVVLLQPEELLEELPHFLHTLGMLLHTNLRLKLDPQHRPMLYPYYGREDEDRTHDMSRG
RRSLELEREVVGSKVYLEIDNRQCVHNSNDCFSTTDQAAAFIAAQSAKGSLPLPVISVWS
QPEEDDIQKHHLYLLTLVGAVILGLLVLGVVVVKSKRKHGTLWVPEGFLPKKDRKRREPV
GQDDLGMKNLVTPQDEESMMYANQNERWLDDRPEAKKKKTEDQALLPEGEGTVDRRQWTL
QHLEAADIRMNPSLALTPPQAQQELDCMDVNVRGPDGFTPLMLASLRVGGPDVSEEEEEE
EDDSAANVITDLICQGATLVAQTDRTGETALHLAARYARADAAKRLLDSGADGNAKDNTG
RSPLHCAVAADAQGVFQILIRNRATDLDARMNDGTTPLILAARLAVEGMVEELINCHADV
NAVDDHGKSSLHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFQVAQVLL
DHFSNRDITDHMDRLPRDIAQERMHHDIVQLLDEYNVVRSPHGAGGHMVGVMCGPNGSFL
SLRQAPQGKKARRVNTKTPGSNPNLGKDLKEVKGRRRKKSLGENKGHLSESSVTLSPVDS
LESPHAYISDNSSHSHLTAPGAQQHPQHTLSLASMSHGSSTILPPVSHMLSQHGLGIGRA
GQHSPSEWMGLPSSGYGHMFGVLHHHQAAGCHPSMHQQGMVAPMNVTMAREQLPSVVSFQ
MMPNSASQQLVNQQQQHRPSPHAQNHCAQNMGGSLYQGSDMGHPAAQMPNNLMPHQDGQR
AEALPQYQPLQSSVDKYPTPPSQHSYPSTSENTPGHGKQGPSEHPYLTPSPDSPDQWSSS
SPHSASDWSDVTTSPTSMSQLQPSGAHIAEQQRSSMQAFA
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atggggatacccaggcgcgatgtcgggcagattttactaattctgagctgggtctgcgtc
tcggaggctctgcaatgtcgaggagtgaaggagccctgtatcaatgatgggaaatgcatt
cccttcaacaacggcactggatactgcaagtgtgctgcaggttacctgggggagtactgc
cagcacaaggatacttgcctgcctgatacgtgcagaaacaggggcaactgcacagcaatg
gtgtcagggggcgtggtccgtacggcctgcacctgccccctgggtttctccgggaccatc
tgtgagaccccccagcccacagcctgctacccgcataacccctgccaccaccagggcacc
tgccgtctcctggccctggacagatgggagtgtgtgtgtccgcgtggctggacaggtaag
agctgccagcatgtggactcctgtgcctctcagccctgccagcacggaggcaattgctcc
gccctgccgagggagcgcttcacctgcagctgcctccccggctataccgggcttacctgc
cagacggacatcgacgagtgtgcagccaggccggcagtgtgccagaacaatgggcagtgt
gtgaacatgccagggagcgcccgctgcgaatgccggccgggcttcagcgggaagcactgt
gagagtgtctatgtgccctgcgcaccctccccctgcctcaacgggggcacctgccggccc
accagcgacgtctcctacgagtgcaactgcctgccaggtttcaatgggacggactgtgaa
aggaacattgatgactgcccgcagcaccgttgccagaatggggggacctgcgtggacgga
gtgaacacctacaactgccagtgtcccccggagtggacaggtcagttctgcacagaggat
gtggacgagtgcaggctgcagcccaacgcctgtcagaatggagggacctgcagcaaccgg
caaggcagctacagctgtgtctgcgtcaacggctggagtggcgacgactgcagcaagaac
atcgatgactgcgccactgcagcctgtgcagcggggtccacatgcatcgaccgcgtggca
tccttcgtctgcaactgccccgtgggcaaaacaggtctcctgtgccacgtggcagatgct
tgtattagcaacccctgccaggaggagtcgatgtgtgacaccaaccccctaaacgggcag
tacatctgcacctgcccctcagggttcaaaggagccgcctgcacagaggacatcgatgaa
tgcaccatgaactcgaacccgtgtgagcacggcgggcgctgtgtgaacacagatggctca
ttccgctgcgactgtgcgctcggctacaccgggccgcgctgcgaggctgacgtcaatgag
tgcatctccatgccctgtcagaacgacgccacctgcctggaccagatcggagagttcacc
tgcatctgtatgccagggttcatcgggctgcactgtgaggagaacatcgacgagtgccag
agtaacccgtgcctgaacagcggcaggtgcaccgaccagatcaacaggttcatgtgtgac
tgcccgccaggcttcagtggtgtggtgtgccaggtggacatcgatgagtgtgcgagcacg
ccgtgccacaacggagccaagtgcatcgatcgacccaacggctacgagtgtgactgcgca
gaggggttcactggcttgctgtgtgaggggaacatcgatgactgtgatccggagccctgc
caccacgggcactgccaggatggcattgccacctacacgtgtgtgtgtgacccgggctac
gtgggacccatctgcagtgagcaggtcaacgagtgccagagcagcccctgccagaacgag
ggccgctgcatcgacctggtcaacaagtaccagtgcaactgcctgccaggcacctccggt
gacaactgtgagaataactttgatgagtgtgcgagcagcccctgtgaatatgggatctgc
aaggatggactgaaccgatacgactgcgtctgcactccgggatacacaggcccaatgtgc
aacatcgacatcaacgagtgcgcctcgaacccgtgtcacaacggcggcacgtgcttgaat
gagctcaacagcttccgctgcctgtgtcccgagggttaccgggaccccatctgctactcc
gaggtggacgagtgcatcagcagcccctgtgtccatggcagctgcatggacgacgtcaat
gggtacaggtgtgagtgtgaacctggctgggcagggatggactgcgagctggatcgcaat
gaatgtgaatcgaacccgtgtgtcaatggaggaacctgcactgacctcaccaacggctac
agctgcacctgcaggaagggcttcaaagggtctaactgtgagattaatatcaacgagtgc
gcctcgaacccgtgcttgtaccaggggacctgcatcgatggagtcagcagctacacctgc
cattgctcactgccttacacaggtgtgaactgtgaaatcatccttgctccctgtgacccc
gatccctgcaccaactctgggatctgccaggcatctgctgactactcgagctactcctgc
ctgtgtgcccccggctggcaaggtcagcgatgttcacaagacatcaacgaatgtgtcacc
aacccctgtaagaatggcgctgtgtgccagaacagccagggcagctacctgtgccaatgc
cgacctgggtacaccgggaccaactgcgagaccaacatcgatgactgcacgccaaatccg
tgccagaatgggggctcctgtgtggacggcgttaactcgttctcgtgctcctgcctgccg
gggttccacgaggcccactgccagacagaggtgaacgagtgcgacagccacccctgtctg
aacggagccacctgcaacgactatgtgaacagctacgcctgccagtgcgccccgggcttc
aacggcatccactgtgagaccaacatcctggagtgcacagacagctcctgtctcaataat
ggcacctgtgtggacgggatcaacatgttcagttgccgctgccggccaggcttcgtgggc
acggtgtgccagtacgagatcaacgagtgcgactcccagccctgtcagaacggcggcacc
tgtatggacaggctgggcacctatcgctgctcctgccctgcgggctacattggcaacaac
tgccagaccttggtcaacctgtgcgtcacgtccttgtgtaacaacgggggcacctgtgtg
caggtggggcagtccctgcggtgcgagtgtcccggtgactggactggcatgtactgtgat
gtgcccatggtctcctgcagagtggctgcttttcgcaaatgtgtcagcgttgatcaggtg
tgccaacactctggaacatgcatcaatacgggcaacacccaccagtgccagtgccaggcg
ggctacaccggcagctactgtgagctggacgtggacgagtgcgcctcgaacccctgccgc
catgccgctcgctgccaggatctgcagggaggctacctgtgccagtgcctagctgggtac
cagggggtgagctgtgagtacgaagtggacgagtgccagtcccagccctgcaggaacgga
ggcacgtgcttcgacctggtgaaccgattcagctgctcctgccctcccgggacacacggg
ctgcagtgtgagatcaacaatgatgactgtgctccagatgcccatcccagcggggggcca
cgctgcttcaatggagggcagtgcatcgatggcattgggggctacacctgcagctgcccc
cctggctttgctggccagcactgtgagggcgatgtcaacgagtgtctgtccagcccctgt
gaccccaagggcagccttgactgcgtccagaaaaccaacaactacacatgcaagtgccgg
cacggcttcacagggcgtcactgtgagactgtcgtggacctgtgccagctgaacccgtgt
cagaacagtggggcgtgttctgttgacctcaactctccacttggctacgtctgccactgc
cgcttgggctttgttgggaataactgtgagtataaccgatgtgggcagatccgctgccag
aacaagcaggtttgtgtggagacctcgtcaggtccactgtgccgctgcccggagggaccc
gagggagctcgatgtgagaatgtgggctgtgccaaccgaccctgcaggaacggagccacc
tgcctagcccagccccagccgccctactaccagtgccagtgcccggagcacttcgacggg
cgcgactgtgacatctactcccccccatctccccgggtacccagaacagactgccagatc
ccacagtgcgcccacaaggctggcgatgacgtctgcgacatgcagtgcaacacccacgag
tgcggctgggacagcggggactgctccctgcacttcccctccccctggaagctgtgcccc
cccgagctgcgctgctgggagctgttcaacaacgacatgtgtaacgagcagtgcaacact
gcagagtgcttcttcgacagctacgagtgccagagcagaggcaggacctgcaagtatcag
gattactgcatcaatcactacgctgacaggcactgtgaccagggctgcaacacagaggaa
tgtggctgggacggactggactgctcggaggacgcgccccagcggctggaggccacactg
gtcattgtggtgctgctgcagccggaggagcttctggaggagctgccccacttcctgcac
acgctgggcatgctgctccatacaaacctgcgtctcaagctggacccccagcacaggccc
atgctgtacccctactacggcagggaggacgaggatcgcacccacgacatgagcaggggc
cggcgctccctggagctggagagggaggtcgtgggttctaaggtgtacctggagattgat
aaccgccagtgtgttcacaattccaatgactgtttttccacaacggaccaggctgctgcg
ttcatagctgctcagtcagccaagggcagcctccctctcccagtcatctccgtctggagc
cagccggaggaggatgacattcagaagcaccacctgtacctgctgaccctggtgggggct
gtaatcctggggctcctggtcctgggcgtggtcgtggtgaagagcaagcgcaagcatggc
acgctctgggtccctgaggggttcctgcccaagaaggaccgcaagcgccgggagcctgtg
ggccaggatgatctcggaatgaagaacctggtgacaccacaagatgaagagagcatgatg
tatgccaatcagaacgagcgctggcttgatgaccggcctgaagccaaaaagaaaaagact
gaggaccaggccctcctccctgaaggcgaggggacggtcgaccgccggcaatggacgctt
cagcacctggaggcggccgatatccgcatgaacccctcgctggcactgactcccccgcag
gcccagcaggagctggactgcatggacgtcaatgtcaggggaccagatggcttcacccct
ttgatgctggcatccttgcgagtgggtggtcccgatgtgtcagaggaggaggaggaggag
gaggacgactctgctgccaatgtaatcacagacctgatctgccagggagccaccctggtg
gcgcagacggaccgcaccggcgagaccgcgctccacctggcagcccgctacgctcgggcc
gacgctgccaagcgcctgctggactccggagcagacggcaatgccaaagacaacacaggc
cgctcgccactgcattgcgctgtggcagccgacgcacaaggagtcttccagattctcatc
cgtaatcgagccacagacctggatgcccgtatgaacgatggcaccaccccgctgatcctt
gccgctcgcctcgcggtggagggcatggtggaagagctcatcaactgccacgctgatgtc
aacgctgtggatgatcacggaaagtcgtctctgcactgggccgcagctgtcaacaatgtc
gaagccacgctggtgctgctgaagaacggagccaaccgcgacatgcaggacaacaaggag
gagacccctctctttctcgccgcgcgggagggcagcttccaggtagctcaagtgctgctg
gatcacttctccaaccgggacatcacagaccacatggaccggctgccccgggacattgcg
caggagcgcatgcatcacgacattgtgcagctgctggacgagtacaacgtggtgcgcagt
cctcacggggcggggggacacatggtgggcgtcatgtgtggccccaacggctccttcctc
agcctgcgccaagcccctcaggggaagaaggcaagacgcgtcaacaccaagaccccaggc
agcaaccccaacctgggcaaggacctgaaagaagtcaagggccgtcgacggaagaaatct
ctgggagagaacaagggccacctgtcggagagctcggttaccctgtcccccgtcgactcc
cttgaatctccccacgcctacatctcagacaacagctcccactcacacctgacagcacca
ggggcgcagcagcatccgcagcacaccctctccctcgctagcatgagccacggctccagc
accatcctgccccctgtcagccacatgctgtcccagcacggcctgggtatagggagggcg
ggccagcacagcccctcagagtggatggggctgcccagctcgggctacggccacatgttc
ggggtcctccaccatcaccaagccgcgggctgtcaccccagcatgcaccagcagggcatg
gtggcgcccatgaacgtcaccatggcgagggagcagctgccgtccgtagtctcctttcaa
atgatgccaaactcagccagccagcagcttgtgaatcagcagcagcagcacagaccctct
ccacatgctcaaaaccactgcgcacagaacatgggcggctccctgtatcagggctctgac
atgggccaccccgctgcccagatgcccaacaacctgatgccccatcaagatggccagagg
gcagaagcgctccctcaataccaacctcttcagagctctgtggataaataccccaccccc
ccatcgcagcatagctacccctccacctcggagaacacgcccggtcacggcaagcagggc
ccaagcgagcacccctacctcaccccctcgccagattccccagaccaatggtccagctcc
tccccccactctgcctccgactggtccgacgtcaccaccagccccacctccatgagccag
ctgcagcccagcggcgcccacattgccgagcagcagaggagcagcatgcaggcgtttgca
tga
DBGET
integrated database retrieval system
