Polyodon spathula (Mississippi paddlefish): 121326853
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Entry
121326853 CDS
T07273
Name
(RefSeq) chordin-like
KO
K04657
chordin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121326853
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
Motif
Other DBs
NCBI-GeneID:
121326853
NCBI-ProteinID:
XP_041126368
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All DBs
Position
14:39382328..39397918
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AA seq
953 aa
AA seq
DB search
MKTCILVAVLLQNFGWLGSGQASRLKSAALPIQPELEPQPSKGMSGCSFGGKFYAPEDTW
HPDLGEPFGVMHCVVCHCESQRNRRGKVFGKVSCKNIKHDCPEPPCSDPVLLPGHCCRSC
PKAHSHVPDKKVDHIFDGFEYFQEKDDDLHKTYNDRSYLSSEDISQDDSRTDFVALLTAA
ADSWKSSSSGVARARFTLSRSSLVFSITFKRIGHPSRVKFIDRDGNIVFEYFVPRTASPG
SNMICGIWSNLQKSHIRLLKSEQLHVSMLTTANQEEEINGKLIKHRALFAETFSSIITSD
AEHAGMGGIAMLTLSDVENNLHFILMFEGLLERREKERSIVPIRVELLYHHHVLREIRAN
VTSHDPDFAEVLTNLNNREMFWLSRGQLEIAVATEGRNSRRISGYITGKKSCDTIQSVLS
SGDALTPTKTGAVGSATLTLHDNGTLEYQIQVAGVASKVTGVTIETKPRRRSRRSVLFDM
TADYSEGRVVGMWERLNARDIHMLLQNELFLNVATSEYEEGELRGQISSLLYSGLQARLQ
ELPVPLAGQFVSPPVRTSAAGHVWVSVDENCHLHYEIVVSGLRKSDDVTLDAHLHGFAEI
GELDDSSREHKRLLKGFYGSQAEGVLKDLSMELLRHLDKGTAFIQVSTKVNPRGEIRGRV
HVPNNCESGPTSQIDDAHFDFTPFEEVKLDPEEIKKDPSSCFFEGQFRAHGSRWAPDYDK
KCTVCTCQKRTVICDPIICPVLDCANVVHLEDRCCPVCEEKKQEKGVKQTEKSGDQMEGC
YFEGDRKIHPPGTTWHPFVPPFGYIKCAVCTCKGATGEVHCEKVNCPRLTCSNPVRRSPS
DCCKECPAEEKAPIDLTEMMQADGPRACKFGKNWYLSNESWHPHVPPFGEMKCITCWCDD
GVTKCQREQCPLLTCSKISRIESKCCPGCKDAYSMEEVEQLKEEEEKKQNWGY
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttgtatcctggtggcagtcctgctgcagaatttcggatggctaggttcggga
caagcttctcggctcaaatccgctgcgttgccaattcaaccggagctggagcctcaaccg
tcgaaaggaatgtcaggctgctcattcggaggaaagttttatgcacctgaagacacttgg
cacccggacctaggagagccgttcggggtgatgcactgtgtggtgtgtcactgtgaatcg
caaaggaatcgccgtggaaaggtgtttggaaaggtgagctgtaagaacatcaaacacgac
tgccccgaaccaccctgcagtgaccccgttctactgcctgggcattgctgcaggtcctgc
cccaaagcccactctcatgttccagataagaaagtggaccacattttcgacggatttgag
tatttccaggagaaagatgacgatctacataaaacttacaacgaccgctcttacctcagc
tccgaggacatttcccaggatgacagcagaacagattttgtggcgctgctcactgctgcc
gctgactcttggaagtccagctccagcggagttgcccgcgcccgcttcactctgtcgaga
tccagcctggttttctccatcacattcaaaagaatcgggcatcccagtagagttaaattc
atagacagagatggaaatattgtatttgagtactttgtgccaaggactgcatctccagga
agcaatatgatctgtggcatctggagcaatcttcagaagtcgcacatccggctgctgaaa
tcagaacagcttcacgttagcatgttgaccacagccaatcaggaagaagagatcaatgga
aagctcatcaagcaccgggccctgtttgctgaaacctttagttccataataacctctgat
gctgagcatgcaggcatgggcggaatcgctatgctgacgctgagcgacgtggagaacaac
ctgcacttcattctgatgtttgagggtctgctggagagaagggagaaagagcgctccata
gtgcccatccgagtggagctgctgtaccatcaccatgtgctgagagaaatccgagccaat
gttacctcacacgaccctgactttgcagaggtgctgacgaacctcaataaccgcgagatg
ttctggctgtctcgcggtcagctggagattgcagtggcaaccgaggggaggaattcccgt
cgcatttcagggtacatcaccgggaagaagtcctgtgacactatccagagcgtgctgtcc
agtggagatgccctgacacccacaaaaactggagccgtgggctctgccactctcaccctg
catgacaatggaacactggaataccagattcaggtggccggggttgccagcaaagtgact
ggcgtgaccatcgagacaaagccgcgacgcaggagccgacgcagtgtgctgtttgacatg
actgctgactacagcgaggggcgcgtggtggggatgtgggaacgcctgaacgcccgtgac
atccatatgctgctgcagaatgagctgttcctcaacgtggctacttccgagtacgaggag
ggagagctccgggggcaaatcagctccctgctgtacagcggcctgcaggcccgactccaa
gagcttccagtccctctggcgggtcagtttgtgtccccccctgtccgcacaagtgcggcg
ggtcacgtttgggtctcggtggacgagaactgtcacctgcactatgagatcgtggtgtcc
ggcctcagaaaatccgacgacgtcacccttgacgcccacctgcacggcttcgctgagatc
ggagagctggacgacagcagccgcgaacacaagagactgctcaagggcttttatgggtca
caggccgaaggtgtgctgaaggacctcagtatggagcttctacgtcatctagacaagggg
accgcctttatccaagtcagcaccaaggtgaaccccaggggagagatccgaggaagggtc
catgtcccaaacaactgtgaatcgggccccacctcccagatcgatgatgcacatttcgac
ttcaccccattcgaggaggtgaagctggaccctgaggagatcaagaaagaccccagctcc
tgcttcttcgagggccagttccgtgcacacggctcccgctgggcccctgactacgacaag
aagtgcacggtctgcacttgccagaagcggactgtgatttgcgatcccatcatttgccct
gttctggactgtgccaatgttgtccatcttgaagacaggtgctgtccagtctgtgaagag
aaaaaacaagagaaaggtgtcaaacaaacagaaaagtcaggtgaccagatggaaggctgc
tacttcgagggggacaggaagatacatccaccagggaccacatggcatccgtttgtgcct
ccgttcggatacatcaagtgtgccgtctgtacctgcaagggagccactggagaagtccac
tgtgagaaggtgaactgccctcgactgacctgcagcaaccctgtcagacgcagtccctcc
gactgctgcaaagaatgcccagctgaagagaaggctcccattgacctcacggagatgatg
caggcggatgggccgcgggcttgtaaattcgggaagaattggtacctcagcaacgagagc
tggcacccgcatgttcctccttttggagaaatgaagtgcatcacctgctggtgcgacgac
ggcgttaccaagtgccagagagaacagtgccccctattaacctgcagcaagatctccagg
atagagagcaagtgctgccctgggtgcaaagatgcctacagtatggaggaagtggagcag
ctgaaggaagaagaagaaaagaaacagaactggggctactga
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