Polyodon spathula (Mississippi paddlefish): 121326866
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Entry
121326866 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121326866
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121326866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121326866
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121326866
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121326866
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121326866
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121326866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
121326866
NCBI-ProteinID:
XP_041126387
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All DBs
Position
14:complement(29293125..29326712)
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AA seq
865 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPRIGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQCVYMHLKRTMKEKATGASGGAVPQRRNGKVFLDLELNCDFNGDDYEYEDEAKL
VIFPEHYEIPLPNIEELPALVTIACDAVLNAKSPYRRQESDSWDDDVQVSKHASSLRQLD
NGVRIPPSGWKCSKCELRENLWVNLTDGSVLCGKWFFDGKGGNGHAVEHYRETNYPLAVK
LGTITPDGADVYSFDEEEAVLDPHLAEHLAHFGIDMLQIQKTENGFTDTDVSPRISEWEV
IQESGLKLKPVYGSGYTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIFDYSPLDP
TQDFNTQMAKLGHGLLSGQYSKPPIKSELIEQVMKEEHKHQQKGISLKMFKALTSKGHPE
FSSSRQQDAQEFFLHLINQVERNSEGSENPSDVFRFLVEERTQCCQSRMVRYTQRADHIM
QLPAPMEAAVNKDELIAYEVKRQEAEASRRAPPPAVRARIPFSACLQAYTEPENVDDFWS
SALQAKSAGVKTSRFKSFPEYLVIQIKKFTFGLDWVPKKLDVSIDMPDLLDITHLRATGL
QPKEEELPDIAPPIVVPEESKDHLMNNFMDSPEIDESAVMQLAEMGFPLEACRKAVYYTG
NMGAEVAFNWVIAHMEEPDFAEPLVVSGFSEIDSSSSASVPMADNQPPEESVAILTSMGF
PRYQALQGLKATNNNLEHALDWIFTHPDSEDESEAASDIADPEGNANISASADANVNAKA
NANASVNTNATADNEPNGPRVRDGPGRYELFAFISHMGTSTMCGRYVCHIKKEGRWVIYN
DHKVCLSERPPKDLGYIYFYHQILS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctagtcccttttatgcccacgatcagagtgcctaga
ataggggacagagtattcaagagtgaatgtgccttttcatacgattctccagaatcggaa
ggtggcctatatgtgtgcatgaacacttttctaggatttggacgggaacatgttgaaaga
cactatcgaaaaacaggccagtgtgtgtacatgcatctgaaacgcaccatgaaagagaaa
gccacaggtgcctctgggggggctgtaccacaaagaagaaatggaaaagtatttttagat
ttagaactgaactgcgactttaatggggacgattatgaatatgaagacgaagctaaactt
gtcatatttccagagcactacgagatccccttaccaaatattgaagagttgcctgcactg
gtgactatagcgtgcgacgcagtactcaatgccaaatcaccctacagaagacaggagtct
gattcgtgggatgatgatgttcaggtctcgaaacacgccagcagcttaagacagctggac
aacggggtcagaataccacccagtggctggaaatgctccaagtgcgagcttcgggagaac
ctgtgggtgaacctgacggacggctccgtcctgtgtgggaagtggttctttgacggcaaa
ggaggaaacgggcacgctgtggagcactaccgggaaacaaactaccccctggctgtcaaa
ctgggaaccatcacccccgatggagcagacgtgtattcgtttgatgaagaggaggcagta
cttgacccacatttagcagaacacttggcacactttgggattgatatgcttcaaattcaa
aagacagagaacggcttcacagacactgatgtcagcccgcggatcagtgagtgggaggtg
atccaggaatcagggttgaagctcaaacctgtgtatggctccggttacactggtatcaag
aacctggggaacagctgctacctcggaaccaccatgcaagtcctcttcagcatccctgaa
ttccagcgagcgtatgttggcaatctccagcggatttttgactattcacctctcgatccc
acacaggatttcaacacacagatggccaagctgggccatggtcttctttcaggccagtac
tccaaaccaccaattaagtcagagctcattgaacaggtgatgaaagaagaacacaagcac
cagcagaaagggatttccctaaagatgttcaaagccttgacaagtaaaggccacccggag
ttctcttccagcagacagcaagacgcacaggagttcttccttcatttgataaaccaggtg
gagagaaacagcgaaggctcagagaatcccagtgatgtgttccgattcctggtggaagaa
cgaacccagtgctgtcagtccagaatggtccggtacacacagcgtgctgaccacatcatg
caacttcctgcgcccatggaagccgcagtaaacaaggatgaattgatagcttatgaagtg
aaacgtcaggaggctgaagcgagcaggagagcgcccccgccagcggtccgggccaggatt
ccgttcagcgcctgtttgcaggcctacacagagccggagaacgtggacgacttctggagc
agtgctctgcaggccaagtccgccggggtcaaaacatctcgctttaaatcatttcctgaa
tacctggttatacagataaagaagtttacctttgggttggactgggtgcctaagaaatta
gacgtttctatagacatgccagacttattggacatcactcacctccgtgccactgggtta
cagccaaaagaggaggagcttccagacattgctccgcccattgttgttccagaggaatct
aaagatcatttgatgaataatttcatggactctccagaaatagatgagtctgcagtgatg
cagcttgctgaaatgggcttccccctcgaagcctgtcgcaaggcggtttactacacagga
aacatgggggctgaagtggccttcaactgggttatagcccacatggaggagcccgacttt
gctgagccgttggtggtttctggttttagtgagattgactcttcatcatcggcatcggtt
cctatggctgacaaccagcctccagaggagagtgtagccatccttacatccatgggcttt
cccaggtaccaggccttgcagggcctgaaggcaacgaacaacaatctggagcatgcattg
gactggatctttactcacccagacagtgaagatgagagtgaggcagcttcagacattgct
gatccagagggcaatgccaacatcagtgccagcgccgacgccaatgtcaacgccaaagcc
aatgccaatgccagtgtcaacaccaacgccacagccgacaatgagccaaatggaccgcgg
gttagggacgggcctggcagatacgagctgtttgccttcattagccatatgggaacatcc
acaatgtgtggccgctatgtatgtcacatcaaaaaggagggaagatgggtaatctacaat
gaccacaaagtgtgtctgtcagaaagacctcccaaagacttgggttacatttacttttac
caccaaatactcagctag
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