Polyodon spathula (Mississippi paddlefish): 121326871
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Entry
121326871 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 29-like isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121326871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121326871
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121326871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
121326871
NCBI-ProteinID:
XP_041126405
LinkDB
All DBs
Position
14:complement(10234938..10285116)
Genome browser
AA seq
1321 aa
AA seq
DB search
MLRQNNNSGGNKLSLGITQLSNSHYFPLTATTSSRGMGHSTKSNSLSSISLSSDCQDSPG
VDPDYIIQLANDVRRFADVLLHLKEAFHAEENQDCLHQVVHERLGNLLQVLKAVISKHQT
LNSVDILGAAGTVIAKVKSVNFKEVNEDNKREIFSSIDTLAFTFGNVVSDFLMGDVDSSS
ALGLPQTRRSRSFENLSVESGGLLAEKDDLLGHLRAEEVDSMLLKNDSGIESALLYAKAW
SKYTKDVLAWVEKRLSLDMECAKNFVKMAESAKALVGQQEHMPFREIYTSAFQNDIEYSQ
LLLQTATALQTNKFIQPLLARRNELDKLRKEIKEQWQREQKKMQEADSALRKAKLLYDQR
HEEYEKAKSATIRAEEEQLGLSGGLSKDGSKVLEKRRRLEEEALQKADEASEQHKNCKAD
SSEKRVGLETVKSEILTQLRELVFQCDLTLKAVTVNLFQMQQGQVVSLPVNYQSLCESAK
LYEPGQRYSEFVKSLPKEESMLESFTFETQMSQTEGLQFDKRTMNSVHSSHGNLSQMSVT
SGDFQSVEDADSPVQMRTGKMGETRSNSSTDIQALRGQGPFRAWPTGSQGGGMCSDSESA
GGSSESRSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDEREPPSPSDNGINEMTSEMAN
SPGPFRNALLSKAAQTHKLRKLRAPSKCRECDSLVVFQGAECEECSLACHKKCLETLAIQ
CGHKKLHGRLHLFGVDFALATKNNPDGIPFIIKKCTSEIENRALNIKGIYRVNGAKSRVE
KLCQAFENGKDLVELSDLYPHDISNVLKLYLRQLPEPLILFRHYNEFIGLAKESQQVITE
EVDGRMNSPGAEKPHLSIELNRIIFKIRDVLRQLPRAHYNTLQYLIGHLCRVAEKQEENK
MTASNLGIIFGPTLIKPRQTDAEVSLSSLVDYPYQARIVELLILHNGKIFDLSLSPLSAS
PPAGESSPFERKETNFSAEDKEQHLKRHSKSLVDIKEQSSKVYKRHSSIIPSTLLMDEVK
DVKHKTGARDSSAALFEISEKFPSEPSLQEGQKSSFSKSNHNVAKVQMRPPRSKLASRPI
SMPVERLLNPSQLNEKNCRNVNERDRSPMSEETLDRTKTCSTYCRNSYYDTLSLRRTWDR
QYKHYNITPTTAMIMANVPKESRQNDTLSASSPASYNLGSTSGNTMLPIKPYTAAVRPVQ
TAKKEASSFDGCPASSGFRAPRTLQPPPGTFYKPPSVNQEKQAADLVPKTCAAATSNSET
GQGDTVKNRNDCDTTSSVSSAQLSSPNSSPEDLCQSDVRPVYQRLRPRRLQELENREAHF
V
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacagaacaacaacagcggtggcaacaagctctctctgggcattacacagctc
tccaactctcactatttccccctgacggccaccaccagttcccggggcatgggccacagc
accaagagcaactccctcagtagcatcagcttgagctcggactgccaggacagccccggt
gtggatcccgattacatcattcaactggccaacgacgtccgcaggtttgcagatgtgctc
ctgcatctcaaagaggcctttcatgctgaagaaaatcaagactgtttacatcaagtggtt
cacgagaggctcggcaatctgcttcaagtcctgaaggccgtcatcagcaaacaccagaca
ctcaactcggtagacatcctcggggcagcaggaaccgtcattgccaaagtgaaaagtgtc
aatttcaaggaagtgaatgaagacaacaaacgagaaatattttcatccattgacacattg
gcttttacctttggcaatgtagtgtctgatttccttatgggcgatgtagacagcagttcg
gcattggggcttccccagactcggagaagtcggtcttttgagaacctctcggtggagtcg
ggaggattacttgctgagaaggatgatcttctgggtcatcttcgtgcagaggaagttgac
agcatgctgctgaaaaatgacagtgggatcgagtcggcccttctgtacgccaaggcctgg
tccaagtataccaaagatgttttggcttgggtggaaaaacggctcagcttggatatggag
tgtgcaaaaaactttgtaaaaatggctgaatcggcaaaagcccttgtgggtcagcaggaa
cacatgccattccgtgaaatttacacctccgcctttcaaaatgacattgaatacagccag
ctcttactgcaaacagctactgctctccaaacaaacaaattcattcagcctcttttggcc
agaaggaatgaactagataaactacgcaaagaaatcaaagaacaatggcagagagaacag
aagaaaatgcaagaagcagattcagctttgagaaaggccaagcttttgtacgaccagcgt
catgaagaatatgaaaaggccaaatcggcgacaattcgggcagaggaggagcagctggga
ttgagtggaggccttagtaaagatggcagcaaagtgctggagaagagacggcgcttagag
gaagaggctcttcagaaagctgatgaagccagtgagcaacataaaaactgcaaagcagat
tccagtgagaagagagtcggtctggaaactgtgaaaagtgaaatcttgacacaactccgg
gaactggtcttccagtgtgatctcactttgaaagcggtgactgtcaacttgttccagatg
cagcaggggcaggtggtttctcttccagtgaactaccagtcgctgtgtgaaagtgccaag
ctgtatgaacctgggcagcgctactctgagtttgtaaagagcctgccaaaggaagaaagc
atgctggagtcctttacttttgagacacagatgtcccaaactgaagggctgcagtttgat
aaaagaacaatgaacagtgtgcattcctcacatggaaatctgtcgcagatgtcggtcacc
tctggagattttcagtctgttgaagatgcagatagtccagtccaaatgcgcacagggaag
atgggagaaacgagatccaacagcagcactgacatccaagcactaagggggcaagggccg
ttccgcgcctggccgactggcagtcagggaggggggatgtgcagtgactcagaaagtgca
ggtgggagcagtgagtccagatccatggactcccctaccgccagcccaggagattttaaa
agaaggctgccaagaaccccatccacaggcaccatgtcttcggcagatgaccttgatgag
agagagccaccttctccttcagacaatggtataaatgaaatgacttctgaaatggcaaac
tccccaggacccttccggaatgcgctcctgtccaaggccgcacaaacccacaaactcaga
aagctgagagctccttcaaagtgcagggagtgtgacagcctggtggtgtttcagggggca
gagtgtgaggagtgttcactcgcttgtcacaagaagtgcttggagaccctagctattcag
tgcggccacaagaaactgcatggtcgtcttcatctgtttggggttgattttgctcttgct
accaaaaataacccagatggaataccctttataatcaaaaagtgcacctctgaaatcgaa
aacagggctctcaacataaagggtatttatcgggtaaatggagctaaatcaagagttgag
aagctttgccaagcatttgaaaacgggaaggacttggtggagctttctgatctgtatcca
catgacatcagcaatgtgctaaaactgtacctgcgacagctaccagagccactgattttg
tttcgtcattataatgaatttattggcctggccaaagagagccagcaggtcatcactgag
gaagtagatggacgaatgaacagccctggcgcagagaagcctcacctgagcattgagttg
aaccgaattatcttcaaaattcgagacgtgttgaggcagctgccccgggcccactacaat
actctgcagtacctcataggacacctgtgcagagtggcagaaaaacaggaagaaaacaaa
atgacagccagcaatctgggaatcatttttgggcccacgttaatcaagccaaggcagacg
gatgccgaggtttcactttcttcccttgtggactacccctaccaggctcggattgtggag
ctgctcattttgcacaatggaaaaatcttcgatctctctttaagccctttgtcagcctcg
cctccggctggagagagctcaccatttgagcggaaagaaacaaacttctcagcagaggac
aaagaacaacatctaaagaggcactccaagtcattagtggacatcaaagaacagagctct
aaagtatataaaagacattcttctataatcccatctactcttttgatggatgaagtaaag
gatgtgaaacacaaaacaggtgcaagagattcttctgctgctttgtttgagatttctgag
aaattcccatcagagcccagtcttcaagagggacagaaatcgtcttttagtaagtcgaat
cacaatgtagccaaagttcaaatgagaccaccacgatccaaactagcttctcgacccatt
agcatgccggttgaaagactattaaacccttcccagctaaatgagaagaattgcagaaat
gtaaatgagcgagacaggagccccatgagtgaggaaactttagacagaacaaagacttgt
tctacgtactgccggaattcttactatgacactctgtccctgaggagaacatgggacagg
cagtacaaacattataatatcacacccacgactgccatgattatggcaaacgtacccaag
gaaagtcggcaaaatgatactctctctgcctcttcaccagcaagctacaatcttgggagc
acttctgggaatactatgctccccataaagccatacactgcagccgttaggccagtacag
acagcaaaaaaagaggctagttctttcgatggctgtcctgcttcctctggcttcagagca
ccgagaaccttgcagcctcctccaggaactttctacaaacctccttctgttaaccaagaa
aaacaagctgcagatttagtgccaaaaacatgtgctgcagccacaagtaactctgagact
gggcagggtgatactgtgaaaaaccgaaacgactgtgacaccacatccagtgtttcatct
gcccagctgtcctctcccaactccagccctgaagatctgtgccaaagcgatgtcaggcca
gtttatcaaagactgcggcccaggcgcctgcaagagttagaaaacagggaagcacatttt
gtctaa
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