Polyodon spathula (Mississippi paddlefish): 121326895
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Entry
121326895 CDS
T07273
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121326895
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121326895
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121326895
Protein phosphatases and associated proteins [BR:
pspa01009
]
HAD phosphatases
Fcp/Scp phosphatases
121326895
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121326895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
TetR_C_13_2
Motif
Other DBs
NCBI-GeneID:
121326895
NCBI-ProteinID:
XP_041126458
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All DBs
Position
14:5095651..5116828
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AA seq
321 aa
AA seq
DB search
MAEIQKGRSRSPKSGKRGGKPVKTVTIEEAAKRKEALKEAYRKKYEEQQREWQIVERLLE
DNIAEEFLVDCAKFISPANYKDTVEERFILRMCGYPFCQNKLVNIPKQQYKISIKTNKVY
DITERKCFCSNFCYKASKHFEAQIPDAPAWMREGERPPDVKLLKQGRSGSSGEEVKIAED
PIAPSQIENPDIDGSSMAPPLPLVDSNAQHLIQKRIVIDKLNRSLKDILGPLQLALCDVS
TDLNNLIRTFRFTSSNIIHKNPEWTLISVVLLSMLTAVSPLLQESLKSPTSIEFISTFMK
TFNLKDKDFESLVRIIKSHGE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattcagaaaggcagaagcagatctccaaaatcgggaaagcgaggaggaaag
ccagtgaaaaccgtgacaattgaagaggctgctaaaaggaaagaagctttgaaggaagct
tataggaagaagtatgaagagcagcagagggaatggcagattgtggagcgactcctggaa
gataacattgcagaagagtttctggttgactgtgcaaagttcatctctccagcgaactac
aaggacacagtggaggagcgttttatcctcaggatgtgcggctatcctttttgtcaaaac
aaactcgtcaatattcctaaacagcagtacaaaatctcaatcaaaaccaataaagtgtat
gatattacagaaaggaagtgtttctgcagtaacttttgttataaagcatcaaaacacttt
gaagcccagattcctgacgcccctgcgtggatgcgagagggtgaaagacctccagatgtc
aaattattgaagcaaggacgaagtggcagctcgggcgaggaggtgaagatagctgaagat
cccatcgcgccatctcagattgaaaacccggacatcgatggtagcagcatggcccctcct
cttcctttggttgattccaatgctcagcaccttatccaaaagcgcattgttatagacaaa
ttgaacagaagtttaaaggatattctgggacctctccaacttgcactgtgtgatgtctct
actgatcttaacaaccttatcagaaccttcaggtttacaagttctaacattattcacaaa
aacccagaatggactttaatttcagttgttcttctctcaatgttgactgcagtttccccc
ctgcttcaggaatcgttgaaaagccccacttctattgagtttatttcaacgttcatgaag
acatttaatctgaaggacaaagattttgagagtttagtacgcatcataaaatctcatgga
gagtga
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