Polyodon spathula (Mississippi paddlefish): 121326994
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Entry
121326994 CDS
T07273
Name
(RefSeq) serine/arginine repetitive matrix protein 5-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121326994
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121326994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
121326994
NCBI-ProteinID:
XP_041126644
LinkDB
All DBs
Position
14:37898495..37919057
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AA seq
662 aa
AA seq
DB search
MADLSIDQKKLPGVKEVCRDFAVLEDHALAHNLQEQEIENHLASNIQKSRLVQYDLQVAK
RMQDEEDKRAWARNQRRQRDIVHSDNEIAQEIQEQLVKQALDKRQQEEKDEAIARRLHEK
ELKEERKRKQQLQDVPYEDDYYEDNGDHARNRHKERGPQEYERLHRYRHRSWERDTDPQA
ESRGSQSTFYMHSPEPTRAPHHRHELQEPERERDTRRKEKPARLPPPNHSKNSREHRQER
GREIRRDHSKEHRQEHDREIRRDHSKEHRQEHDREIRRDHSKEHRQEHDREIRRDYSKEQ
RRDHSREHEQECDREIRRDHSKEQRRDHSREHEQERGREIRRDHSKEQRRDHSREHRQER
GREIRRDHSKEQRRDHSREHRQERDREIRRDHSREQRPDHSRDSVPHRSRDASREQQISE
SYRVSAGPSRRWSWEEYSGREGREDRQRLPSGCDEVFHDPSSRHHMRDARTEPSCRAQER
HGTRSHSSEDWPENHPHHRDQRGRKPRGEYGVQEVIQGVTRLDLRGSELSDLEVALRLQE
EELKASNLDKRAVQMAHDEEIAWLLMEKEKRLHIRSRDREKGTMEMRRQEPEWKLEPGEV
VRPRSREGYELQRPRSNKPTRPPRPVGDYENVDASYRNTGSHCSPRPSTRSDTGYKGSYS
RQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctaagtattgatcagaaaaaattacctggcgtgaaggaagtgtgccgggac
ttcgctgtgctggaggatcatgccctcgcccacaacctgcaggaacaggagattgagaat
cacctggcatcaaacatccagaagagccgactggtgcagtatgacctccaggtggcaaag
aggatgcaggatgaagaggacaagagggcatgggcacgcaaccagagacgccaacgagac
atagtgcacagcgataacgagatcgcacaggagattcaggagcagctggtgaagcaggcc
ctggataaacgacagcaggaggagaaggacgaggccatcgctcgcagacttcatgagaag
gagctgaaggaggagaggaagaggaagcagcagctgcaggatgtcccttatgaagacgat
tactatgaagacaatggagaccacgcccgaaacagacataaagagcgtgggccacaagag
tacgagaggctacacagatacaggcaccggagctgggaaagagacaccgacccccaggca
gaatccagagggtcccagtccaccttctacatgcacagccccgaacctaccagggctccc
caccacagacacgaactgcaggaacccgagagggagcgagacacgaggaggaaggagaag
cctgctagactcccaccacccaaccacagcaaaaacagcagggaacacagacaagaacgt
ggcagggagatcagacgtgatcacagcaaggaacacagacaagaacatgacagggagatc
agacgtgatcacagcaaggaacacagacaagaacatgacagggagatcagacgtgatcac
agcaaggaacacagacaagaacatgacagggagatcagacgtgattacagcaaggaacag
agacgagatcacagcagggaacacgaacaagaatgtgacagggagatcagacgtgatcac
agcaaggaacagagacgagatcacagcagggaacacgaacaagaacgtggcagggagatc
agacgtgatcacagcaaggaacagagacgagatcacagccgggaacacagacaagaacgt
ggcagggagatcagacgtgatcacagcaaggaacagagacgagatcacagcagggaacac
agacaagaacgtgacagggagatcagacgtgatcacagcagggaacagagaccggatcac
agcagggacagcgtgccacaccgtagcagggacgcaagccgggaacagcagattagtgag
agctacagggtctcggctggcccgagcagacgctggtcttgggaggagtacagtggaagg
gaggggagggaggacaggcaaaggctgccctctgggtgcgatgaggtgttccatgatccg
agctccagacaccacatgagggacgccaggacagagccctcgtgtcgagctcaggagagg
cacggaacacgctcgcattccagtgaggactggccagagaaccatccccaccacagagac
cagagagggaggaaaccccggggggagtatggggtgcaggaggtgattcagggagtcact
cgtcttgatctccgaggcagcgagctgtcagacctggaggtagccctgaggctgcaggag
gaggagctaaaggctagcaacttagacaagagagcagtccagatggcacatgatgaggaa
attgcctggctactgatggagaaggagaagagattgcacataaggtcgagggatcgggaa
aagggaacaatggaaatgagacgacaggagccagaatggaagctggagccaggagaggtg
gtgcggccgcgatcccgggaaggctacgagctccagagaccaaggagcaacaaaccaacc
aggccacctcgacccgtgggtgactatgaaaacgttgatgccagctacagaaacacaggc
tcccactgctcgcctcgaccctccaccaggtctgacacaggatataaaggttcctattcc
aggcaatga
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