Polyodon spathula (Mississippi paddlefish): 121327010
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Entry
121327010 CDS
T07273
Name
(RefSeq) leucine-rich repeat-containing protein 7-like isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121327010
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
121327010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
PDZ
LRR_LRWD1
PDZ_6
LRR_EndoS
LRR_5
PDZ_2
LRR_NXF1-5
LRR_At5g56370
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
121327010
NCBI-ProteinID:
XP_041126686
LinkDB
All DBs
Position
14:15879709..16064901
Genome browser
AA seq
1514 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSMPDNDLSSLPATIASLVNLKELDISKNGIQDF
PDNIKCCKCLTIIEASVNPIAKLPDGFTQLLNLMQLYLNDAFLEYLPANFGRLTKLRILE
LRENHLKTLPKSMHKLTQLERLDLGNNEFTEMPEVLEQIQNLKELWMDNNGLQTLPGSIG
KLKQLTYLDMSKNRVETIDSEISGCEALEDLLLSSNMLQQLPDSIGMLKKLTTLKVDDNQ
LTVLPNTIGSGRAKLGLSLLEEFDCSCNELESLPPTIGYLHNLRTLAADENFLSELPREI
GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLRNLPFSFTKLKELAALWLSDN
QSKALIPLQSEAHPETKLRVLTNYMFPQQPRNEEDYQSDNDSFNPTLWEEQRQQRMTVAF
DFEDKKEEENSGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHALTGDKRDSSTNM
ELQVKDKYEHKWPISTKEVTSEVTERETKDFQKTQMTESSTSHNSAMEIPKRKEKDELTE
SSEIALHRVVPKQQQPETLSLTASCFCLIDSLGGSPNDIRISDMRPTLVEPPLYKPKVVL
MGKEKKESTDESDADKMHCPNNSGSSATYSDYSPSQGSSGSSNPPGNVGALQTGSKDGVV
PTHWTNRLAQSFPQPIETKPLISQRESAPAGIPQQRNERHPLTDTFDNWNDSSHYDNTGF
VAEETTMENSGTTPMLGSTSRSASSHGRRPLIRQDRIVGVPLELEQSPHTFHNVRNTPET
EVPAPNPWQNWTRTPSPFEDRTAFPSKLESTPASSPAPDKKDFEQEMGELPGTFPSTGAW
GFLESRDSGASRSHSNIFHCRQDPVKGAIVISKSTERLSPMMKEVKAKFKKSQSIDEIDI
GSYKVYSIPLDNYGSSMENQGSLDKPETQPSQEQSMSRSQSVPMLDEDLEGYASGKGSQQ
QKPPIPKKVYHFDQSFNPKGAVDVKSERRLPTSFNTNPEYMSQQGKNIPKEVLSPRGYRG
YTPMEHMFSFSQPSVNEDSISQQFPSQRSRPGFLRRSDSLVSSTEMALFRRVTEAQELPL
NDRYNRTHYKGMLEHQNSMSTMTESQFHKRNGRYEDEYLSYQETKKPITGFPVKNLTQRR
PLSARSYSTESYGASQARPVSARPTMAALLEKVPSDYNLSTCTEKTSDNEMKMRTAQMKG
DDSSSKMPVDWRQQLLRHIEAKRLDRTPSQQSNVLDNGQEDMSPTSQWAPYSLGRRDVPP
ENVIKKLPDSLPNGLNYPQAGSHSHQVQTMMLSSTQNPQHRSARDQQYEGAINKISIQQY
QSPLPIPISISSTQSLSSPRGAQSGRCLIQTKGQKSMDGYQDQFCVRIEKNPGLGFSISG
GISGQGNPFKPSDMGIFVTRVQPDGAACNVLQPGDKILKANGHSFSHLEHEEAVSLLKSF
PKTVDLVILRENPS
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcaacccttcagttgcagtgtctggagatgacaaccaagaggaagctc
attggccgcctggtgccctgccgatgcttccggggtgaggaagaggtcatctcagtgctg
gattactcccactgcagcctccaacaggtgccaaaggagatcttcagtttcgagcgcacg
ctagaggaactttatctagatgctaatcagattgaagagctacccaagcaattatttaac
tgtcaagcactgcgcaaactgagcatgcccgacaatgatctttccagtctgccagccacc
atcgccagccttgtaaaccttaaggagctagacatcagcaaaaacggtattcaagatttt
ccagataacattaaatgctgtaaatgtttaacaattattgaagccagtgtcaatccaatt
gccaaactcccagatggcttcacacagctgttaaacttaatgcagctctacttaaatgat
gcatttctggaatatcttcctgccaacttcgggaggcttaccaaattacgcatcttggaa
ctacgggaaaatcacctgaaaactttaccaaagtcaatgcacaaactgacacagctggag
cgtttagacctgggcaataatgaattcactgaaatgccggaagtcctggagcaaatacaa
aacctgaaggagctgtggatggataacaatggattgcagacactaccagggtctataggg
aagttaaagcagttgacgtatttggacatgtccaagaacagggtagaaaccattgacagt
gagatttctggttgcgaggctctagaggacctcctcctgtcatccaatatgttgcagcag
ctgccagactctataggaatgttaaaaaagctgacaactctaaaagtggatgacaaccag
ctgaccgttctgcctaacacaataggaagtggacgcgccaaattaggtttatcgctttta
gaagagtttgattgtagctgtaacgagcttgagtcccttcctcccaccattggatatctc
cataatctccggacgttagctgctgatgaaaactttctgtctgagttgccaagagagatt
ggaagctgtaaaaatgtgactgtcatgtctctgcgctccaataaacttgagtttctgcct
gaggagattggacagatgcagaagttgagggttttaaatttgagcgacaacaggttgaga
aacttgccgttcagttttacaaagctgaaggaacttgcagcactttggctttcagataat
cagtccaaggcacttattcccctacaaagcgaggctcatccagaaacaaagctgagggtg
cttaccaactacatgtttccacagcaaccacgcaacgaagaagattaccagtcagacaac
gacagtttcaacccaaccctatgggaggagcagcgacagcagcgcatgactgtggccttt
gactttgaagacaagaaggaagaggagaactctgggaaagttaaggttgaaataaacctg
aagcgctatcccacaccctaccctgaggacctgaagaacatggtgaagtcagtgcagaat
ctggtgggaaagactagccacgctctaaccggagataagcgcgattccagcaccaacatg
gagctccaagtcaaggacaaatacgaacacaagtggcccatctcaacaaaggaggtaaca
agcgaggttacagagcgagaaaccaaagacttccagaagacacagatgactgaatcaagt
accagccataattctgccatggaaatcccaaagcgaaaggagaaggatgagctaactgag
agctcagagattgctttacatcgagtcgtccccaagcagcaacagccagagacactctcc
cttacagcttcctgtttctgcctcatagattccttaggaggctccccaaatgacattcga
atttcggatatgcgacctaccttagttgaacctcctttgtacaagccaaaagtcgtcttg
atgggtaaagaaaagaaagaatcgacagacgagtcagacgcagataaaatgcactgtcca
aataacagcggttcctctgccacttactcagactactccccttcccaggggtcctcaggc
tcctcgaaccccccggggaatgtgggagcactgcagaccggttccaaggacggggtggtg
cccacccattggacaaacaggctagctcaatctttcccccagcccatcgagacaaagcca
ttgatcagccagagagaatctgccccagcaggaatcccacagcagcgcaatgagaggcac
ccacttaccgataccttcgacaactggaacgacagctcccattatgacaacactggcttc
gttgcagaggaaaccaccatggaaaattcaggcaccaccccgatgctaggctccacttcc
agaagcgcttccagccatggacgcaggcctctaataaggcaggataggatagtgggtgtc
cctctagagctggagcagtcaccacacacgttccacaatgtccgaaacacacccgaaact
gaagtgcctgctcctaatccttggcagaactggacaagaacccccagcccctttgaagac
aggactgcgtttccttccaagctggaaagtactccagcaagcagcccagcccctgacaag
aaggactttgagcaagagatgggtgagctacctgggaccttcccgtctactggggcatgg
ggcttcttggaatcccgagattcgggagctagccggagccattcgaacatattccactgc
aggcaagaccccgttaaaggtgctattgtcatcagtaaaagcacagagaggttgtctccc
atgatgaaggaagtgaaggccaagttcaaaaaatcccagagcattgatgagattgatatc
ggatcatataaggtgtacagcatcccgcttgataactacggctccagtatggaaaaccaa
ggcagcttggataagcccgaaacccagccatcgcaggaacaaagcatgtcgcgcagtcag
tcagtccccatgctggatgaagatttggaagggtacgccagcggcaaggggtcccagcag
cagaagcctcccatccctaaaaaagtttaccacttcgatcaaagcttcaaccctaaaggg
gcagtggatgtgaagtctgagaggaggctacctacctcctttaacaccaaccctgagtat
atgagccaacagggtaagaacatccccaaggaggtgctgagtccaaggggatataggggg
tatacacctatggagcacatgttctcattttcccagccttcagtcaatgaggactctatc
agccagcagtttcccagccagaggtcccggcctggattcctccggagatcagactccctg
gtcagctccacggagatggctctcttcagaagggtaacagaagcccaagagctgccactc
aacgaccggtataacaggacgcattataaaggcatgttggagcaccagaacagcatgtcc
accatgacagaatcccagttccacaaaaggaatggtaggtatgaggatgaatacttgtcg
tatcaggagacaaaaaagcccatcacaggttttcctgtgaaaaacctaacccagcggcgg
ccattgtcagcccggagctacagcacggagagctacggggcttcccaagcaagaccggtg
tctgcaaggcctactatggctgcactcttagaaaaagtcccttccgattacaatctcagc
acctgtacggaaaagacctccgacaacgagatgaagatgcgtactgcacagatgaaaggg
gatgacagctcttcaaaaatgccagtggactggaggcaacagctgcttagacatatagag
gctaaaagattagaccggactccatctcagcagagcaacgtcttggataatggacaggaa
gacatgtctccaaccagccagtgggctccatattcactgggccggagggacgtaccaccg
gagaacgtcataaaaaaactccctgactctttgcccaatgggttaaattacccacaggca
ggtagccactctcaccaagttcagacgatgatgttgtcctccacgcagaacccccagcac
cgatccgcccgagaccaacagtacgaaggtgccatcaataaaatctccatccagcagtat
cagtcaccgctgcccatccccatctccatctcctccacgcaaagcctttccagcccgcgg
ggggctcaaagtggacgctgcctgatacagacgaaggggcagaagagtatggatgggtat
caggaccagttttgtgttcgaatcgagaagaatcctggccttggtttcagcatctcagga
ggaattagcggacagggtaacccatttaagccttcagatatgggtatctttgttactagg
gtacagcctgacggagcggcctgcaatgtcttacaacctggggataagattctaaaggcg
aatggacatagtttttcacacctggaacatgaagaggctgtgtctttgctgaagagtttc
ccgaaaacagtggacctggtaatcttgagggagaatccatcttaa
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integrated database retrieval system
