Polyodon spathula (Mississippi paddlefish): 121327085
Help
Entry
121327085 CDS
T07273
Name
(RefSeq) target of EGR1 protein 1-like
KO
K13202
target of EGR1 protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121327085
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121327085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Torus
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
121327085
NCBI-ProteinID:
XP_041126807
LinkDB
All DBs
Position
14:7490718..7495086
Genome browser
AA seq
533 aa
AA seq
DB search
MSSMIVPVIDVHNDNFKELWPAMVLAIKTSSFIALDTELSGLGSRKDLLAQCIEERYKAI
CNVARTRSILSLGIACFKKLPDKAPHTYLVQVYNLTLLCMQEYVVEPQSVQFLVQHGFDF
NKQYAQGIPYRKGNDKGSDLQSQSMRALFVEVIQARKPLVLHNGLIDLVFLYQCFYAWLP
RRLGTFTADLSEIFPAGIFDTKHAAEFEMRFMASCLEYTYKKWWVSQPLQRIMLLLCARK
LKQVLFSHLGPGVERTEFCNYTERLCTYIDFRQCTEVGGERETGEEGPPAICMKFSAYGW
CPNGSQCTLSHNTDLIIVQDEQKKKSKGRKRRKNRRKFKVAQEESRAPNEHESSPPNKQL
CVEDLKMPEDWGSVKETASADVVEIMKDALLAKEVERKDMSDEQVVEEAQGSNGTVNKSG
PQQISGTETGDQSDVTIPQGEKEGSKGKEQQKAAEGGMHRAGFDAFMTGYIFAYITTLKA
GAETDPSSGACLPDCLNKVYLSGKSIPLQIVKSSFSKFSKAHTLKMESVWGKS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatgatcgtccctgtaattgatgtccacaatgataattttaaagagctctgg
ccagccatggtgctggctatcaaaacatcatctttcatagccctggacactgaattaagt
ggtcttggatcaagaaaggatttactggcacaatgtattgaagaacggtacaaagccatt
tgcaatgttgcacggacacgctctattttgtccttgggaattgcctgtttcaaaaagctt
cccgacaaggctcctcacacttacctggtgcaggtgtacaacctcaccctgctttgcatg
caggagtatgtggttgaaccgcagtcagtgcagttcctggtgcagcatggctttgacttt
aacaagcagtatgcccagggcatcccataccgtaaaggaaatgacaagggcagtgatctg
cagagccaaagcatgcgagcgcttttcgtggaggtgattcaagcacggaagcccctggtc
cttcacaatggactcatagacctggtctttctctaccagtgtttctacgcttggctccca
cgtcggctgggaaccttcactgcagacctatctgagatcttccctgctggcatctttgac
accaaacatgctgcggaatttgagatgcgcttcatggcctcctgtctggaatacacctac
aagaaatggtgggtctcgcagcctttacagagaataatgctactgttgtgtgccaggaaa
ctaaaacaggttctgttctcccacctgggaccgggggtggagagaacggagttctgcaac
tacacagagaggctgtgcacctacattgacttccgacagtgcacagaggtgggtggggag
agagagactggagaggagggaccccctgccatctgtatgaagttctctgcatatggctgg
tgccccaacggttcacagtgcactctgtctcacaacacagacctcatcatagtgcaagat
gagcagaaaaagaagagtaagggtcgtaagaggagaaagaacaggaggaaattcaaagtt
gctcaggaggagtccagggcccccaatgagcatgaaagcagccccccgaacaaacaactg
tgtgtggaggatcttaaaatgccagaagactggggatctgtgaaggagacagcctctgct
gatgtggtggagatcatgaaggatgcactactagcgaaagaagtggagaggaaggatatg
agtgatgagcaagtggttgaggaagcacagggttcaaatgggacagtaaacaagtctggg
ccgcaacagatctcaggaactgagactggagatcagagtgatgtgacgatacctcaagga
gaaaaagaaggcagcaaggggaaagagcagcagaaggcggcggagggggggatgcacaga
gctgggtttgatgctttcatgacgggatacatttttgcatacatcactacattgaaggca
ggagcggaaactgacccaagttcaggggcatgtctgccagactgcctgaacaaagtgtac
ctcagtgggaaatccatccccctgcagatcgtaaaaagcagcttttctaagttttcaaaa
gcccacactctcaaaatggaatcagtctggggcaagagttga
DBGET
integrated database retrieval system
